RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 SULF1Q8IWU6 871 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 MTMR14Q8NCE2 650 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 EAF2Q96CJ1 260 aaPredicted RBP10.77□□□□□ -0.69
SNX4-205ENST00000482965 BCL11AQ9H165 835 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 IL1RAPL2Q9NP60 686 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 SUGT1Q9Y2Z0 365 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 PCDHB15Q9Y5E8 787 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 MAST3O60307 1309 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 AKAP11Q9UKA4 1901 aa10.76□□□□□ -0.69
SNX4-205ENST00000482965 MYH2Q9UKX2 1941 aa10.76□□□□□ -0.69
SNX4-205ENST00000482965 ADM5C9JUS6 153 aa10.76□□□□□ -0.69
SNX4-205ENST00000482965 MYO1BO43795 1136 aa10.76□□□□□ -0.69
SNX4-205ENST00000482965 LDHBP07195 334 aaKnown RBP10.76□□□□□ -0.69
SNX4-205ENST00000482965 ARID4AP29374 1257 aaPredicted RBP10.76□□□□□ -0.69
SNX4-205ENST00000482965 CRKP46108 304 aa10.76□□□□□ -0.69
SNX4-205ENST00000482965 FMR1Q06787 632 aaKnown RBP eCLIP10.76□□□□□ -0.69
SNX4-205ENST00000482965 CLASRPQ8N2M8 674 aaKnown RBP10.76□□□□□ -0.69
SNX4-205ENST00000482965 ZGPATQ8N5A5 531 aaKnown RBP10.76□□□□□ -0.69
SNX4-205ENST00000482965 ZBED3Q96IU2 234 aaPredicted RBP10.76□□□□□ -0.69
SNX4-205ENST00000482965 TLR7Q9NYK1 1049 aaKnown RBP10.76□□□□□ -0.69
SNX4-205ENST00000482965 DBNLQ9UJU6 430 aaKnown RBP10.76□□□□□ -0.69
SNX4-205ENST00000482965 SERPINA10Q9UK55 444 aa10.76□□□□□ -0.69
SNX4-205ENST00000482965 PCDHAC2Q9Y5I4 1007 aa10.76□□□□□ -0.69
SNX4-205ENST00000482965 PDS5AQ29RF7 1337 aaKnown RBP10.76□□□□□ -0.69
SNX4-205ENST00000482965 PITPNM2Q9BZ72 1349 aa10.76□□□□□ -0.69
SNX4-205ENST00000482965 SALL1Q9NSC2 1324 aa10.76□□□□□ -0.69
SNX4-205ENST00000482965 SPDYE2BA6NHP3 402 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 TMEM88BA6NKF7 163 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 IFIT2P09913 472 aaKnown RBP10.75□□□□□ -0.69
SNX4-205ENST00000482965 SPDYE6P0CI01 402 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 PRDX5P30044 214 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 MCAMP43121 646 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 HTRA3P83110 453 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 HDLBPQ00341 1268 aaKnown RBP10.75□□□□□ -0.69
SNX4-205ENST00000482965 AAMPQ13685 434 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 APOBEC3FQ8IUX4 373 aaKnown RBP10.75□□□□□ -0.69
SNX4-205ENST00000482965 SPATA5Q8NB90 893 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 EXOC6Q8TAG9 804 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 TEKT1Q969V4 418 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 PRMT6Q96LA8 375 aaPredicted RBP10.75□□□□□ -0.69
SNX4-205ENST00000482965 LRRCC1Q9C099 1032 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 ZNF408Q9H9D4 720 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 HMG20BQ9P0W2 317 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 ABCF2Q9UG63 623 aa10.75□□□□□ -0.69
SNX4-205ENST00000482965 MYO5AQ9Y4I1 1855 aaKnown RBP10.74□□□□□ -0.69
SNX4-205ENST00000482965 CLRN2A0PK11 232 aa10.74□□□□□ -0.69
SNX4-205ENST00000482965 CELF2O95319 508 aaKnown RBP10.74□□□□□ -0.69
SNX4-205ENST00000482965 SPTY2D1Q68D10 685 aaPredicted RBP10.74□□□□□ -0.69
SNX4-205ENST00000482965 PI16Q6UXB8 463 aa10.74□□□□□ -0.69
SNX4-205ENST00000482965 DZIP1Q86YF9 867 aaKnown RBP10.74□□□□□ -0.69
SNX4-205ENST00000482965 DCTPP1Q9H773 170 aa10.74□□□□□ -0.69
SNX4-205ENST00000482965 VEZTQ9HBM0 779 aa10.74□□□□□ -0.69
SNX4-205ENST00000482965 SNRKQ9NRH2 765 aa10.74□□□□□ -0.69
SNX4-205ENST00000482965 CREBZFQ9NS37 354 aa10.74□□□□□ -0.69
SNX4-205ENST00000482965 SCAF8Q9UPN6 1271 aaKnown RBP10.74□□□□□ -0.69
SNX4-205ENST00000482965 SMARCA5O60264 1052 aaPredicted RBP10.73□□□□□ -0.69
SNX4-205ENST00000482965 IRX6P78412 446 aaPredicted RBP10.73□□□□□ -0.69
SNX4-205ENST00000482965 HHIPL2Q6UWX4 724 aa10.73□□□□□ -0.69
SNX4-205ENST00000482965 DLK2Q6UY11 383 aa10.73□□□□□ -0.69
SNX4-205ENST00000482965 ERICH6Q7L0X2 663 aa10.73□□□□□ -0.69
SNX4-205ENST00000482965 CDCA5Q96FF9 252 aa10.73□□□□□ -0.69
SNX4-205ENST00000482965 ZNF512BQ96KM6 892 aaPredicted RBP10.73□□□□□ -0.69
SNX4-205ENST00000482965 ZDHHC15Q96MV8 337 aa10.73□□□□□ -0.69
SNX4-205ENST00000482965 MRIQ9BWK5 157 aa10.73□□□□□ -0.69
SNX4-205ENST00000482965 TDRD3Q9H7E2 651 aaKnown RBP10.73□□□□□ -0.69
SNX4-205ENST00000482965 ABT1Q9ULW3 272 aaKnown RBP10.73□□□□□ -0.69
SNX4-205ENST00000482965 DIXDC1Q155Q3 683 aa10.72□□□□□ -0.69
SNX4-205ENST00000482965 SPDYE2Q495Y8 402 aa10.72□□□□□ -0.69
SNX4-205ENST00000482965 CST9Q5W186 159 aa10.72□□□□□ -0.69
SNX4-205ENST00000482965 TBC1D9Q6ZT07 1266 aa10.72□□□□□ -0.69
SNX4-205ENST00000482965 SLF2Q8IX21 1173 aa10.72□□□□□ -0.69
SNX4-205ENST00000482965 TMOD2Q9NZR1 351 aa10.72□□□□□ -0.69
SNX4-205ENST00000482965 RAI14Q9P0K7 980 aa10.72□□□□□ -0.69
SNX4-205ENST00000482965 LRP2BPQ9P2M1 347 aa10.72□□□□□ -0.69
SNX4-205ENST00000482965 ZNF70Q9UC06 446 aaPredicted RBP10.72□□□□□ -0.69
SNX4-205ENST00000482965 AOX1Q06278 1338 aa10.72□□□□□ -0.69
SNX4-205ENST00000482965 MAST2Q6P0Q8 1798 aa10.72□□□□□ -0.69
SNX4-205ENST00000482965 AK9Q5TCS8 1911 aa10.72□□□□□ -0.69
SNX4-205ENST00000482965 ZAP70P43403 619 aa10.71□□□□□ -0.69
SNX4-205ENST00000482965 HDAC1Q13547 482 aaPredicted RBP10.71□□□□□ -0.69
SNX4-205ENST00000482965 TNFAIP1Q13829 316 aa10.71□□□□□ -0.69
SNX4-205ENST00000482965 PRAMEF18Q5VWM3 479 aa10.71□□□□□ -0.69
SNX4-205ENST00000482965 GBA2Q9HCG7 927 aaPredicted RBP10.71□□□□□ -0.69
SNX4-205ENST00000482965 ZBTB47Q9UFB7 747 aaPredicted RBP10.71□□□□□ -0.69
SNX4-205ENST00000482965 DAGLAQ9Y4D2 1042 aa10.71□□□□□ -0.69
SNX4-205ENST00000482965 TCP10L2B9ZVM9 353 aa10.7□□□□□ -0.7
SNX4-205ENST00000482965 CYP2E1P05181 493 aaPredicted RBP10.7□□□□□ -0.7
SNX4-205ENST00000482965 LDHCP07864 332 aa10.7□□□□□ -0.7
SNX4-205ENST00000482965 NF2P35240 595 aa10.7□□□□□ -0.7
SNX4-205ENST00000482965 TNNI2P48788 182 aa10.7□□□□□ -0.7
SNX4-205ENST00000482965 GSTO1P78417 241 aa10.7□□□□□ -0.7
SNX4-205ENST00000482965 MECOMQ03112 1051 aa10.7□□□□□ -0.7
SNX4-205ENST00000482965 APOBEC3HQ6NTF7 200 aaKnown RBP10.7□□□□□ -0.7
SNX4-205ENST00000482965 C2orf69Q8N8R5 385 aa10.7□□□□□ -0.7
SNX4-205ENST00000482965 DEFB129Q9H1M3 183 aa10.7□□□□□ -0.7
SNX4-205ENST00000482965 RWDD1Q9H446 243 aaPredicted RBP10.7□□□□□ -0.7
SNX4-205ENST00000482965 MKRN1Q9UHC7 482 aaKnown RBP10.7□□□□□ -0.7
SNX4-205ENST00000482965 PPP2R3BQ9Y5P8 575 aa10.7□□□□□ -0.7
SNX4-205ENST00000482965 TLL2Q9Y6L7 1015 aa10.7□□□□□ -0.7
SNX4-205ENST00000482965 DOCK2Q92608 1830 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms