RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 RBM26Q5T8P6 1007 aaKnown RBP16.08■□□□□ 0.16
HDAC1-208ENST00000482310 ERICH6Q7L0X2 663 aa16.08■□□□□ 0.16
HDAC1-208ENST00000482310 MICALL2Q8IY33 904 aa16.08■□□□□ 0.16
HDAC1-208ENST00000482310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.08■□□□□ 0.16
HDAC1-208ENST00000482310 RILPL2Q969X0 211 aa16.08■□□□□ 0.16
HDAC1-208ENST00000482310 MYO3BQ8WXR4 1341 aa16.08■□□□□ 0.16
HDAC1-208ENST00000482310 LMOD1P29536 600 aaPredicted RBP16.07■□□□□ 0.16
HDAC1-208ENST00000482310 RBM5P52756 815 aaKnown RBP eCLIP16.07■□□□□ 0.16
HDAC1-208ENST00000482310 ZGPATQ8N5A5 531 aaKnown RBP16.07■□□□□ 0.16
HDAC1-208ENST00000482310 AOX1Q06278 1338 aa16.07■□□□□ 0.16
HDAC1-208ENST00000482310 PDS5AQ29RF7 1337 aaKnown RBP16.07■□□□□ 0.16
HDAC1-208ENST00000482310 SALL1Q9NSC2 1324 aa16.06■□□□□ 0.16
HDAC1-208ENST00000482310 USP17L8P0C7I0 530 aa16.06■□□□□ 0.16
HDAC1-208ENST00000482310 EPS15P42566 896 aa16.06■□□□□ 0.16
HDAC1-208ENST00000482310 APLP1P51693 650 aa16.06■□□□□ 0.16
HDAC1-208ENST00000482310 DIXDC1Q155Q3 683 aa16.06■□□□□ 0.16
HDAC1-208ENST00000482310 SLFNL1Q499Z3 407 aa16.06■□□□□ 0.16
HDAC1-208ENST00000482310 TTC22Q5TAA0 569 aa16.06■□□□□ 0.16
HDAC1-208ENST00000482310 SPTY2D1Q68D10 685 aaPredicted RBP16.06■□□□□ 0.16
HDAC1-208ENST00000482310 AGBL3Q8NEM8 1001 aa16.06■□□□□ 0.16
HDAC1-208ENST00000482310 FSD1Q9BTV5 496 aa16.06■□□□□ 0.16
HDAC1-208ENST00000482310 CNOT7Q9UIV1 285 aaKnown RBP16.06■□□□□ 0.16
HDAC1-208ENST00000482310 PCDHAC2Q9Y5I4 1007 aa16.06■□□□□ 0.16
HDAC1-208ENST00000482310 CHGBP05060 677 aa16.05■□□□□ 0.16
HDAC1-208ENST00000482310 GSPT1P15170 499 aaKnown RBP16.05■□□□□ 0.16
HDAC1-208ENST00000482310 RPS12P25398 132 aaKnown RBP16.05■□□□□ 0.16
HDAC1-208ENST00000482310 FKBP1AP62942 108 aaKnown RBP16.05■□□□□ 0.16
HDAC1-208ENST00000482310 MECOMQ03112 1051 aa16.05■□□□□ 0.16
HDAC1-208ENST00000482310 TTF1Q15361 905 aaPredicted RBP16.05■□□□□ 0.16
HDAC1-208ENST00000482310 TBC1D10BQ4KMP7 808 aaPredicted RBP16.05■□□□□ 0.16
HDAC1-208ENST00000482310 SAMD7Q7Z3H4 446 aa16.05■□□□□ 0.16
HDAC1-208ENST00000482310 MAGEB6Q8N7X4 407 aa16.05■□□□□ 0.16
HDAC1-208ENST00000482310 GMLQ99445 158 aa16.05■□□□□ 0.16
HDAC1-208ENST00000482310 RRAGCQ9HB90 399 aa16.05■□□□□ 0.16
HDAC1-208ENST00000482310 GPRC5DQ9NZD1 345 aa16.05■□□□□ 0.16
HDAC1-208ENST00000482310 HDAC9Q9UKV0 1011 aa16.05■□□□□ 0.16
HDAC1-208ENST00000482310 FOCADQ5VW36 1801 aa16.04■□□□□ 0.16
HDAC1-208ENST00000482310 EGFRP00533 1210 aa16.04■□□□□ 0.16
HDAC1-208ENST00000482310 OGFOD1Q8N543 542 aa16.04■□□□□ 0.16
HDAC1-208ENST00000482310 OSBPL3Q9H4L5 887 aa16.04■□□□□ 0.16
HDAC1-208ENST00000482310 HACL1Q9UJ83 578 aa16.04■□□□□ 0.16
HDAC1-208ENST00000482310 BAZ2AQ9UIF9 1905 aaKnown RBP16.04■□□□□ 0.16
HDAC1-208ENST00000482310 NAV1Q8NEY1 1877 aa16.03■□□□□ 0.16
HDAC1-208ENST00000482310 H7C1D1 291 aa16.03■□□□□ 0.16
HDAC1-208ENST00000482310 CRKP46108 304 aa16.03■□□□□ 0.16
HDAC1-208ENST00000482310 MAP3K12Q12852 859 aa16.03■□□□□ 0.16
HDAC1-208ENST00000482310 CFAP100Q494V2 611 aa16.03■□□□□ 0.16
HDAC1-208ENST00000482310 EAPPQ56P03 285 aaPredicted RBP16.03■□□□□ 0.16
HDAC1-208ENST00000482310 NAA16Q6N069 864 aaPredicted RBP16.03■□□□□ 0.16
HDAC1-208ENST00000482310 CNTROBQ8N137 903 aa16.03■□□□□ 0.16
HDAC1-208ENST00000482310 TRPM4Q8TD43 1214 aa16.03■□□□□ 0.16
HDAC1-208ENST00000482310 MYH1P12882 1939 aa16.02■□□□□ 0.16
HDAC1-208ENST00000482310 MAST3O60307 1309 aa16.02■□□□□ 0.16
HDAC1-208ENST00000482310 CYP7A1P22680 504 aa16.02■□□□□ 0.16
HDAC1-208ENST00000482310 KIF4BQ2VIQ3 1234 aa16.02■□□□□ 0.16
HDAC1-208ENST00000482310 SLC9C2Q5TAH2 1124 aa16.02■□□□□ 0.16
HDAC1-208ENST00000482310 KBTBD3Q8NAB2 608 aa16.02■□□□□ 0.16
HDAC1-208ENST00000482310 RBM46Q8TBY0 533 aaKnown RBP16.02■□□□□ 0.16
HDAC1-208ENST00000482310 ZNF384Q8TF68 577 aa16.02■□□□□ 0.16
HDAC1-208ENST00000482310 DPF2Q92785 391 aa16.02■□□□□ 0.16
HDAC1-208ENST00000482310 TEKT1Q969V4 418 aa16.02■□□□□ 0.16
HDAC1-208ENST00000482310 NSUN4Q96CB9 384 aaKnown RBP16.02■□□□□ 0.16
HDAC1-208ENST00000482310 L3MBTL3Q96JM7 780 aaPredicted RBP16.02■□□□□ 0.16
HDAC1-208ENST00000482310 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.02■□□□□ 0.164e-8■■■□□ 17.4
HDAC1-208ENST00000482310 MYOZ2Q9NPC6 264 aa16.02■□□□□ 0.16
HDAC1-208ENST00000482310 ZNF532Q9HCE3 1301 aa16.01■□□□□ 0.15
HDAC1-208ENST00000482310 POTECB2RU33 542 aa16.01■□□□□ 0.15
HDAC1-208ENST00000482310 PDE6AP16499 860 aa16.01■□□□□ 0.15
HDAC1-208ENST00000482310 SDSP20132 328 aa16.01■□□□□ 0.15
HDAC1-208ENST00000482310 EPHX2P34913 555 aa16.01■□□□□ 0.15
HDAC1-208ENST00000482310 DLGAP5Q15398 846 aa16.01■□□□□ 0.15
HDAC1-208ENST00000482310 ADGRA1Q86SQ6 560 aa16.01■□□□□ 0.15
HDAC1-208ENST00000482310 MIGA1Q8NAN2 632 aa16.01■□□□□ 0.15
HDAC1-208ENST00000482310 EVI5LQ96CN4 794 aa16.01■□□□□ 0.15
HDAC1-208ENST00000482310 SCAF8Q9UPN6 1271 aaKnown RBP16.01■□□□□ 0.15
HDAC1-208ENST00000482310 SUGT1Q9Y2Z0 365 aa16.01■□□□□ 0.15
HDAC1-208ENST00000482310 MROH7-TTC4A0A0A0MT08 1334 aa16■□□□□ 0.15
HDAC1-208ENST00000482310 ASTN2O75129 1339 aaPredicted RBP16■□□□□ 0.15
HDAC1-208ENST00000482310 IQCA1LA6NCM1 817 aa16■□□□□ 0.15
HDAC1-208ENST00000482310 ZBTB22O15209 634 aa16■□□□□ 0.15
HDAC1-208ENST00000482310 ZNF280AP59817 542 aaPredicted RBP16■□□□□ 0.15
HDAC1-208ENST00000482310 GSTO1P78417 241 aa16■□□□□ 0.15
HDAC1-208ENST00000482310 ADARB2Q9NS39 739 aaKnown RBP16■□□□□ 0.15
HDAC1-208ENST00000482310 DAGLAQ9Y4D2 1042 aa16■□□□□ 0.15
HDAC1-208ENST00000482310 CLRN2A0PK11 232 aa15.99■□□□□ 0.15
HDAC1-208ENST00000482310 ADD2P35612 726 aa15.99■□□□□ 0.15
HDAC1-208ENST00000482310 BTDP43251 543 aa15.99■□□□□ 0.15
HDAC1-208ENST00000482310 NBPF9Q3BBW0 867 aa15.99■□□□□ 0.15
HDAC1-208ENST00000482310 NOL10Q9BSC4 688 aaKnown RBP15.99■□□□□ 0.15
HDAC1-208ENST00000482310 TAF1DQ9H5J8 278 aaPredicted RBP15.99■□□□□ 0.15
HDAC1-208ENST00000482310 AATFQ9NY61 560 aaKnown RBP eCLIP15.99■□□□□ 0.15
HDAC1-208ENST00000482310 SERPINA10Q9UK55 444 aa15.99■□□□□ 0.15
HDAC1-208ENST00000482310 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
HDAC1-208ENST00000482310 POTEIP0CG38 1075 aa15.98■□□□□ 0.15
HDAC1-208ENST00000482310 POTEJP0CG39 1038 aa15.98■□□□□ 0.15
HDAC1-208ENST00000482310 VEGFAP15692 232 aaPredicted RBP15.98■□□□□ 0.15
HDAC1-208ENST00000482310 CACNB3P54284 484 aa15.98■□□□□ 0.15
HDAC1-208ENST00000482310 DYNLL1P63167 89 aaKnown RBP15.98■□□□□ 0.15
HDAC1-208ENST00000482310 SLF2Q8IX21 1173 aa15.98■□□□□ 0.15
HDAC1-208ENST00000482310 PRMT6Q96LA8 375 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms