RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 FANCIQ9NVI1 1328 aa13.11□□□□□ -0.31
DDX39B-220ENST00000482195 RBBP6Q7Z6E9 1792 aaKnown RBP13.1□□□□□ -0.31
DDX39B-220ENST00000482195 CSF1RP07333 972 aa13.1□□□□□ -0.31
DDX39B-220ENST00000482195 IREB2P48200 963 aaKnown RBP13.1□□□□□ -0.31
DDX39B-220ENST00000482195 LDLRAD1Q5T700 205 aa13.1□□□□□ -0.31
DDX39B-220ENST00000482195 SALL2Q9Y467 1007 aaPredicted RBP13.1□□□□□ -0.31
DDX39B-220ENST00000482195 PPP2R3BQ9Y5P8 575 aa13.1□□□□□ -0.31
DDX39B-220ENST00000482195 F6X3S4 739 aa13.09□□□□□ -0.31
DDX39B-220ENST00000482195 IGF2BP3O00425 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
DDX39B-220ENST00000482195 ZBTB48P10074 688 aaPredicted RBP13.09□□□□□ -0.31
DDX39B-220ENST00000482195 CCDC27Q2M243 656 aa13.09□□□□□ -0.31
DDX39B-220ENST00000482195 SUPT20HL1Q3ZLR7 823 aa13.09□□□□□ -0.31
DDX39B-220ENST00000482195 CFHR5Q9BXR6 569 aa13.09□□□□□ -0.31
DDX39B-220ENST00000482195 CNNM1Q9NRU3 951 aa13.09□□□□□ -0.31
DDX39B-220ENST00000482195 MYH13Q9UKX3 1938 aa13.08□□□□□ -0.32
DDX39B-220ENST00000482195 CCDC57Q2TAC2 916 aa13.08□□□□□ -0.32
DDX39B-220ENST00000482195 CCDC184Q52MB2 194 aa13.08□□□□□ -0.32
DDX39B-220ENST00000482195 NBPF12Q5TAG4 269 aaPredicted RBP13.08□□□□□ -0.32
DDX39B-220ENST00000482195 OTUD7BQ6GQQ9 843 aa13.08□□□□□ -0.32
DDX39B-220ENST00000482195 OTOP1Q7RTM1 612 aa13.08□□□□□ -0.32
DDX39B-220ENST00000482195 MTMR14Q8NCE2 650 aa13.08□□□□□ -0.32
DDX39B-220ENST00000482195 CD99L2Q8TCZ2 262 aa13.08□□□□□ -0.32
DDX39B-220ENST00000482195 ERO1AQ96HE7 468 aa13.08□□□□□ -0.32
DDX39B-220ENST00000482195 ZNF594Q96JF6 807 aaPredicted RBP13.08□□□□□ -0.32
DDX39B-220ENST00000482195 AOX1Q06278 1338 aa13.08□□□□□ -0.32
DDX39B-220ENST00000482195 IL16Q14005 1332 aa13.08□□□□□ -0.32
DDX39B-220ENST00000482195 IRS2Q9Y4H2 1338 aa13.08□□□□□ -0.32
DDX39B-220ENST00000482195 CENPFP49454 3210 aa13.07□□□□□ -0.32
DDX39B-220ENST00000482195 PPP1R37O75864 691 aa13.07□□□□□ -0.32
DDX39B-220ENST00000482195 IL1R1P14778 569 aa13.07□□□□□ -0.32
DDX39B-220ENST00000482195 INHBEP58166 350 aa13.07□□□□□ -0.32
DDX39B-220ENST00000482195 MAP3K11Q16584 847 aa13.07□□□□□ -0.32
DDX39B-220ENST00000482195 LMBR1LQ6UX01 489 aa13.07□□□□□ -0.32
DDX39B-220ENST00000482195 LDHAL6AQ6ZMR3 332 aa13.07□□□□□ -0.32
DDX39B-220ENST00000482195 EFCAB3Q8N7B9 438 aa13.07□□□□□ -0.32
DDX39B-220ENST00000482195 FBXO22Q8NEZ5 403 aa13.07□□□□□ -0.32
DDX39B-220ENST00000482195 PRMT6Q96LA8 375 aaPredicted RBP13.07□□□□□ -0.32
DDX39B-220ENST00000482195 ELP3Q9H9T3 547 aa13.07□□□□□ -0.32
DDX39B-220ENST00000482195 WDR70Q9NW82 654 aa13.07□□□□□ -0.32
DDX39B-220ENST00000482195 HTTP42858 3142 aa13.07□□□□□ -0.32
DDX39B-220ENST00000482195 FOXO4P98177 505 aa13.06□□□□□ -0.32
DDX39B-220ENST00000482195 EXOSC9Q06265 439 aaKnown RBP13.06□□□□□ -0.32
DDX39B-220ENST00000482195 CRHR2Q13324 411 aa13.06□□□□□ -0.32
DDX39B-220ENST00000482195 TNFAIP1Q13829 316 aa13.06□□□□□ -0.32
DDX39B-220ENST00000482195 RASA3Q14644 834 aa13.06□□□□□ -0.32
DDX39B-220ENST00000482195 MFSD14BQ5SR56 506 aa13.06□□□□□ -0.32
DDX39B-220ENST00000482195 C15orf52Q6ZUT6 534 aaKnown RBP13.06□□□□□ -0.32
DDX39B-220ENST00000482195 ANKRD13AQ8IZ07 590 aa13.06□□□□□ -0.32
DDX39B-220ENST00000482195 GJA5P36382 358 aa13.05□□□□□ -0.32
DDX39B-220ENST00000482195 FKBP1AP62942 108 aaKnown RBP13.05□□□□□ -0.32
DDX39B-220ENST00000482195 KCNV2Q8TDN2 545 aa13.05□□□□□ -0.32
DDX39B-220ENST00000482195 OPTNQ96CV9 577 aa13.05□□□□□ -0.32
DDX39B-220ENST00000482195 C9orf78Q9NZ63 289 aaPredicted RBP13.05□□□□□ -0.32
DDX39B-220ENST00000482195 TTF2Q9UNY4 1162 aaKnown RBP13.05□□□□□ -0.32
DDX39B-220ENST00000482195 AK9Q5TCS8 1911 aa13.05□□□□□ -0.32
DDX39B-220ENST00000482195 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
DDX39B-220ENST00000482195 TCP10L2B9ZVM9 353 aa13.04□□□□□ -0.32
DDX39B-220ENST00000482195 GRM8O00222 908 aa13.04□□□□□ -0.32
DDX39B-220ENST00000482195 VAMP4O75379 141 aa13.04□□□□□ -0.32
DDX39B-220ENST00000482195 USP2O75604 605 aaPredicted RBP13.04□□□□□ -0.32
DDX39B-220ENST00000482195 GYG1P46976 350 aa13.04□□□□□ -0.32
DDX39B-220ENST00000482195 EPHA10Q5JZY3 1008 aa13.04□□□□□ -0.32
DDX39B-220ENST00000482195 BEND3Q5T5X7 828 aa13.04□□□□□ -0.32
DDX39B-220ENST00000482195 SLC4A10Q6U841 1118 aa13.04□□□□□ -0.32
DDX39B-220ENST00000482195 GCC1Q96CN9 775 aa13.04□□□□□ -0.32
DDX39B-220ENST00000482195 TDRD3Q9H7E2 651 aaKnown RBP13.04□□□□□ -0.32
DDX39B-220ENST00000482195 EFCC1Q9HA90 598 aa13.04□□□□□ -0.32
DDX39B-220ENST00000482195 MRS2Q9HD23 443 aa13.04□□□□□ -0.32
DDX39B-220ENST00000482195 ZNF70Q9UC06 446 aaPredicted RBP13.04□□□□□ -0.32
DDX39B-220ENST00000482195 ZSWIM8A7E2V4 1837 aa13.04□□□□□ -0.32
DDX39B-220ENST00000482195 MKI67P46013 3256 aaKnown RBP13.03□□□□□ -0.32
DDX39B-220ENST00000482195 BRCA2P51587 3418 aa13.03□□□□□ -0.32
DDX39B-220ENST00000482195 SP3Q02447 781 aa13.03□□□□□ -0.32
DDX39B-220ENST00000482195 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
DDX39B-220ENST00000482195 INTS3Q68E01 1043 aaKnown RBP13.03□□□□□ -0.32
DDX39B-220ENST00000482195 VPS37DQ86XT2 251 aa13.03□□□□□ -0.32
DDX39B-220ENST00000482195 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
DDX39B-220ENST00000482195 CCL15-CCL14A0A0B4J2E2 113 aa13.02□□□□□ -0.33
DDX39B-220ENST00000482195 UNCXA6NJT0 531 aa13.02□□□□□ -0.33
DDX39B-220ENST00000482195 FRAT2O75474 233 aaPredicted RBP13.02□□□□□ -0.33
DDX39B-220ENST00000482195 HIBADHP31937 336 aaKnown RBP13.02□□□□□ -0.33
DDX39B-220ENST00000482195 TNNI2P48788 182 aa13.02□□□□□ -0.33
DDX39B-220ENST00000482195 TAF1CQ15572 869 aaPredicted RBP13.02□□□□□ -0.33
DDX39B-220ENST00000482195 CCL15Q16663 113 aa13.02□□□□□ -0.33
DDX39B-220ENST00000482195 CDAN1Q8IWY9 1227 aa13.02□□□□□ -0.33
DDX39B-220ENST00000482195 TMEM39BQ9GZU3 492 aa13.02□□□□□ -0.33
DDX39B-220ENST00000482195 SERPINA10Q9UK55 444 aa13.02□□□□□ -0.33
DDX39B-220ENST00000482195 IQSEC3Q9UPP2 1182 aaPredicted RBP13.02□□□□□ -0.33
DDX39B-220ENST00000482195 CSADQ9Y600 493 aa13.02□□□□□ -0.33
DDX39B-220ENST00000482195 FAM205AQ6ZU69 1335 aa13.02□□□□□ -0.33
DDX39B-220ENST00000482195 CRKP46108 304 aa13.01□□□□□ -0.33
DDX39B-220ENST00000482195 UBE4AQ14139 1066 aa13.01□□□□□ -0.33
DDX39B-220ENST00000482195 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
DDX39B-220ENST00000482195 OTUD5Q96G74 571 aa13.01□□□□□ -0.33
DDX39B-220ENST00000482195 PTPN18Q99952 460 aa13.01□□□□□ -0.33
DDX39B-220ENST00000482195 TMEM106CQ9BVX2 250 aa13.01□□□□□ -0.33
DDX39B-220ENST00000482195 SRCIN1Q9C0H9 1055 aa13.01□□□□□ -0.33
DDX39B-220ENST00000482195 MYCP01106 439 aaPredicted RBP13□□□□□ -0.33
DDX39B-220ENST00000482195 VGLL4Q14135 290 aa13□□□□□ -0.33
DDX39B-220ENST00000482195 SLC9C1Q4G0N8 1177 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms