RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 CDAN1Q8IWY9 1227 aa19.13■□□□□ 0.65
HDAC6-224ENST00000481929 TDRD3Q9H7E2 651 aaKnown RBP19.13■□□□□ 0.65
HDAC6-224ENST00000481929 SERPINA10Q9UK55 444 aa19.13■□□□□ 0.65
HDAC6-224ENST00000481929 ADAMTS8Q9UP79 889 aa19.13■□□□□ 0.65
HDAC6-224ENST00000481929 MYBBP1AQ9BQG0 1328 aaKnown RBP19.12■□□□□ 0.65
HDAC6-224ENST00000481929 SPDYE5A6NIY4 337 aa19.12■□□□□ 0.65
HDAC6-224ENST00000481929 STK31Q9BXU1 1019 aa19.12■□□□□ 0.65
HDAC6-224ENST00000481929 TMEM39BQ9GZU3 492 aa19.12■□□□□ 0.65
HDAC6-224ENST00000481929 TCP10L2B9ZVM9 353 aa19.11■□□□□ 0.65
HDAC6-224ENST00000481929 BTBD19C9JJ37 291 aa19.11■□□□□ 0.65
HDAC6-224ENST00000481929 ECM2O94769 699 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-224ENST00000481929 GJA8P48165 433 aa19.11■□□□□ 0.65
HDAC6-224ENST00000481929 SNAPC2Q13487 334 aa19.11■□□□□ 0.65
HDAC6-224ENST00000481929 GCKRQ14397 625 aa19.11■□□□□ 0.65
HDAC6-224ENST00000481929 SRRDQ9UH36 339 aa19.11■□□□□ 0.65
HDAC6-224ENST00000481929 TTF2Q9UNY4 1162 aaKnown RBP19.11■□□□□ 0.65
HDAC6-224ENST00000481929 A0A1W2PPC1 479 aa19.1■□□□□ 0.65
HDAC6-224ENST00000481929 GJB1P08034 283 aa19.1■□□□□ 0.65
HDAC6-224ENST00000481929 HOXD10P28358 340 aa19.1■□□□□ 0.65
HDAC6-224ENST00000481929 GRK4P32298 578 aa19.1■□□□□ 0.65
HDAC6-224ENST00000481929 MFSD14BQ5SR56 506 aa19.1■□□□□ 0.65
HDAC6-224ENST00000481929 UBE2Q1Q7Z7E8 422 aa19.1■□□□□ 0.65
HDAC6-224ENST00000481929 ERO1BQ86YB8 467 aa19.1■□□□□ 0.65
HDAC6-224ENST00000481929 DZIP1LQ8IYY4 767 aaKnown RBP19.1■□□□□ 0.65
HDAC6-224ENST00000481929 RAET1EQ8TD07 263 aa19.1■□□□□ 0.65
HDAC6-224ENST00000481929 MYH16Q9H6N6 1097 aa19.1■□□□□ 0.65
HDAC6-224ENST00000481929 ARAP2Q8WZ64 1704 aa19.1■□□□□ 0.65
HDAC6-224ENST00000481929 FAM205AQ6ZU69 1335 aa19.09■□□□□ 0.65
HDAC6-224ENST00000481929 PSMC4P43686 418 aa19.09■□□□□ 0.65
HDAC6-224ENST00000481929 CASP7P55210 303 aa19.09■□□□□ 0.65
HDAC6-224ENST00000481929 TSPYL6Q8N831 410 aa19.09■□□□□ 0.65
HDAC6-224ENST00000481929 SNCAIPQ9Y6H5 919 aa19.09■□□□□ 0.65
HDAC6-224ENST00000481929 A0A0C4DFX4 3053 aa19.09■□□□□ 0.65
HDAC6-224ENST00000481929 A0A1B0GUL6 1792 aa19.09■□□□□ 0.65
HDAC6-224ENST00000481929 ZBTB7BO15156 539 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-224ENST00000481929 CCL5P13501 91 aa19.08■□□□□ 0.64
HDAC6-224ENST00000481929 IFIT5Q13325 482 aaKnown RBP19.08■□□□□ 0.64
HDAC6-224ENST00000481929 C17orf99Q6UX52 265 aa19.08■□□□□ 0.64
HDAC6-224ENST00000481929 TRIM47Q96LD4 638 aa19.08■□□□□ 0.64
HDAC6-224ENST00000481929 RNF208Q9H0X6 261 aa19.08■□□□□ 0.64
HDAC6-224ENST00000481929 BIN2Q9UBW5 565 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-224ENST00000481929 RIPOR2Q9Y4F9 1068 aa19.08■□□□□ 0.64
HDAC6-224ENST00000481929 IRF6O14896 467 aa19.07■□□□□ 0.64
HDAC6-224ENST00000481929 FMNL1O95466 1100 aaPredicted RBP19.07■□□□□ 0.64
HDAC6-224ENST00000481929 OSBPP22059 807 aa19.07■□□□□ 0.64
HDAC6-224ENST00000481929 UBXN2AP68543 259 aa19.07■□□□□ 0.64
HDAC6-224ENST00000481929 PPIL2Q13356 520 aa19.07■□□□□ 0.64
HDAC6-224ENST00000481929 WRNIP1Q96S55 665 aa19.07■□□□□ 0.64
HDAC6-224ENST00000481929 CPA4Q9UI42 421 aa19.07■□□□□ 0.64
HDAC6-224ENST00000481929 CHMP3Q9Y3E7 222 aa19.07■□□□□ 0.64
HDAC6-224ENST00000481929 MYPNQ86TC9 1320 aa19.06■□□□□ 0.64
HDAC6-224ENST00000481929 PLIN1O60240 522 aa19.06■□□□□ 0.64
HDAC6-224ENST00000481929 FARP2O94887 1054 aaPredicted RBP19.06■□□□□ 0.64
HDAC6-224ENST00000481929 CTGFP29279 349 aa19.06■□□□□ 0.64
HDAC6-224ENST00000481929 CRKP46108 304 aa19.06■□□□□ 0.64
HDAC6-224ENST00000481929 MNX1P50219 401 aaPredicted RBP19.06■□□□□ 0.64
HDAC6-224ENST00000481929 COL6A3P12111 3177 aa19.05■□□□□ 0.64
HDAC6-224ENST00000481929 SOX1O00570 391 aaPredicted RBP19.05■□□□□ 0.64
HDAC6-224ENST00000481929 APAF1O14727 1248 aa19.05■□□□□ 0.64
HDAC6-224ENST00000481929 G2E3Q7L622 706 aa19.05■□□□□ 0.64
HDAC6-224ENST00000481929 ZKSCAN4Q969J2 545 aaPredicted RBP19.05■□□□□ 0.64
HDAC6-224ENST00000481929 HOOK2Q96ED9 719 aa19.05■□□□□ 0.64
HDAC6-224ENST00000481929 LINS1Q8NG48 757 aa19.04■□□□□ 0.64
HDAC6-224ENST00000481929 TDRD7Q8NHU6 1098 aaKnown RBP19.04■□□□□ 0.64
HDAC6-224ENST00000481929 U2AF1L4Q8WU68 220 aaKnown RBP19.04■□□□□ 0.64
HDAC6-224ENST00000481929 LRCH3Q96II8 777 aa19.04■□□□□ 0.64
HDAC6-224ENST00000481929 EVI5O60447 810 aa19.03■□□□□ 0.64
HDAC6-224ENST00000481929 SLC4A2P04920 1241 aa19.03■□□□□ 0.64
HDAC6-224ENST00000481929 TAF7LQ5H9L4 462 aa19.03■□□□□ 0.64
HDAC6-224ENST00000481929 ANKRD23Q86SG2 305 aa19.03■□□□□ 0.64
HDAC6-224ENST00000481929 DNAAF4Q8WXU2 420 aa19.03■□□□□ 0.64
HDAC6-224ENST00000481929 CNNM1Q9NRU3 951 aa19.03■□□□□ 0.64
HDAC6-224ENST00000481929 PDHXO00330 501 aa19.02■□□□□ 0.64
HDAC6-224ENST00000481929 HIBADHP31937 336 aaKnown RBP19.02■□□□□ 0.64
HDAC6-224ENST00000481929 CACNB3P54284 484 aa19.02■□□□□ 0.64
HDAC6-224ENST00000481929 PPATQ06203 517 aa19.02■□□□□ 0.64
HDAC6-224ENST00000481929 FLIIQ13045 1269 aa19.02■□□□□ 0.64
HDAC6-224ENST00000481929 LDHAL6AQ6ZMR3 332 aa19.02■□□□□ 0.64
HDAC6-224ENST00000481929 SLAIN1Q8ND83 568 aa19.02■□□□□ 0.64
HDAC6-224ENST00000481929 TMOD2Q9NZR1 351 aa19.02■□□□□ 0.64
HDAC6-224ENST00000481929 ADGRA2Q96PE1 1338 aa19.01■□□□□ 0.63
HDAC6-224ENST00000481929 GYG1P46976 350 aa19.01■□□□□ 0.63
HDAC6-224ENST00000481929 FOXO4P98177 505 aa19.01■□□□□ 0.63
HDAC6-224ENST00000481929 FKBP5Q13451 457 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-224ENST00000481929 CCDC57Q2TAC2 916 aa19.01■□□□□ 0.63
HDAC6-224ENST00000481929 DCAF15Q66K64 600 aa19.01■□□□□ 0.63
HDAC6-224ENST00000481929 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-224ENST00000481929 FCGRTP55899 365 aa19■□□□□ 0.63
HDAC6-224ENST00000481929 HDLBPQ00341 1268 aaKnown RBP19■□□□□ 0.63
HDAC6-224ENST00000481929 PRKCZQ05513 592 aa19■□□□□ 0.63
HDAC6-224ENST00000481929 UBE4AQ14139 1066 aa19■□□□□ 0.63
HDAC6-224ENST00000481929 FAM83AQ86UY5 434 aa19■□□□□ 0.63
HDAC6-224ENST00000481929 TSR2Q969E8 191 aaKnown RBP19■□□□□ 0.63
HDAC6-224ENST00000481929 ZNF594Q96JF6 807 aaPredicted RBP19■□□□□ 0.63
HDAC6-224ENST00000481929 UNC93B1Q9H1C4 597 aa19■□□□□ 0.63
HDAC6-224ENST00000481929 STAP2Q9UGK3 403 aa19■□□□□ 0.63
HDAC6-224ENST00000481929 LAMA3Q16787 3333 aa18.99■□□□□ 0.63
HDAC6-224ENST00000481929 SGPL1O95470 568 aa18.99■□□□□ 0.63
HDAC6-224ENST00000481929 TWISTNBQ3B726 338 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-224ENST00000481929 LMBR1LQ6UX01 489 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms