RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TTF1Q15361 905 aaPredicted RBP14.04□□□□□ -0.16
HPS4-212ENST00000481910 RILPL2Q969X0 211 aa14.04□□□□□ -0.16
HPS4-212ENST00000481910 DACT2Q5SW24 774 aa14.03□□□□□ -0.16
HPS4-212ENST00000481910 ZGPATQ8N5A5 531 aaKnown RBP14.03□□□□□ -0.16
HPS4-212ENST00000481910 MXD3Q9BW11 206 aa14.03□□□□□ -0.16
HPS4-212ENST00000481910 RNF216Q9NWF9 866 aaPredicted RBP14.03□□□□□ -0.16
HPS4-212ENST00000481910 LRP2BPQ9P2M1 347 aa14.03□□□□□ -0.16
HPS4-212ENST00000481910 VIL1P09327 827 aaKnown RBP14.03□□□□□ -0.16
HPS4-212ENST00000481910 GSPT1P15170 499 aaKnown RBP14.03□□□□□ -0.16
HPS4-212ENST00000481910 TEX2Q8IWB9 1127 aa14.03□□□□□ -0.16
HPS4-212ENST00000481910 CNTROBQ8N137 903 aa14.03□□□□□ -0.16
HPS4-212ENST00000481910 EVI5LQ96CN4 794 aa14.03□□□□□ -0.16
HPS4-212ENST00000481910 SALL1Q9NSC2 1324 aa14.03□□□□□ -0.16
HPS4-212ENST00000481910 UTRNP46939 3433 aa14.03□□□□□ -0.16
HPS4-212ENST00000481910 IDH1O75874 414 aaKnown RBP14.02□□□□□ -0.16
HPS4-212ENST00000481910 SPTY2D1Q68D10 685 aaPredicted RBP14.02□□□□□ -0.16
HPS4-212ENST00000481910 PIH1D3Q9NQM4 214 aaKnown RBP14.02□□□□□ -0.16
HPS4-212ENST00000481910 GJA3Q9Y6H8 435 aa14.02□□□□□ -0.16
HPS4-212ENST00000481910 ZNF541Q9H0D2 1346 aa14.02□□□□□ -0.16
HPS4-212ENST00000481910 PSME4Q14997 1843 aa14.02□□□□□ -0.16
HPS4-212ENST00000481910 LDHBP07195 334 aaKnown RBP14.02□□□□□ -0.17
HPS4-212ENST00000481910 SDSP20132 328 aa14.02□□□□□ -0.17
HPS4-212ENST00000481910 PRDX5P30044 214 aa14.02□□□□□ -0.17
HPS4-212ENST00000481910 FKBP1AP62942 108 aaKnown RBP14.02□□□□□ -0.17
HPS4-212ENST00000481910 DPY19L2Q6NUT2 758 aa14.02□□□□□ -0.17
HPS4-212ENST00000481910 RSBN1LQ6PCB5 846 aaPredicted RBP14.02□□□□□ -0.17
HPS4-212ENST00000481910 CERS5Q8N5B7 392 aa14.02□□□□□ -0.17
HPS4-212ENST00000481910 RAI14Q9P0K7 980 aa14.02□□□□□ -0.17
HPS4-212ENST00000481910 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
HPS4-212ENST00000481910 MYO5AQ9Y4I1 1855 aaKnown RBP14.01□□□□□ -0.17
HPS4-212ENST00000481910 TIAM2Q8IVF5 1701 aa14.01□□□□□ -0.17
HPS4-212ENST00000481910 MYO3BQ8WXR4 1341 aa14.01□□□□□ -0.17
HPS4-212ENST00000481910 F8W031 263 aaPredicted RBP14.01□□□□□ -0.17
HPS4-212ENST00000481910 BMP2KLQ5H9B9 411 aa14.01□□□□□ -0.17
HPS4-212ENST00000481910 KBTBD3Q8NAB2 608 aa14.01□□□□□ -0.17
HPS4-212ENST00000481910 FSD1Q9BTV5 496 aa14.01□□□□□ -0.17
HPS4-212ENST00000481910 MAP3K12Q12852 859 aa14□□□□□ -0.17
HPS4-212ENST00000481910 GRIK5Q16478 980 aa14□□□□□ -0.17
HPS4-212ENST00000481910 KIAA0825Q8IV33 1275 aa14□□□□□ -0.17
HPS4-212ENST00000481910 GPC2Q8N158 579 aa14□□□□□ -0.17
HPS4-212ENST00000481910 SPRYD3Q8NCJ5 442 aa14□□□□□ -0.17
HPS4-212ENST00000481910 AGBL3Q8NEM8 1001 aa14□□□□□ -0.17
HPS4-212ENST00000481910 SUGT1Q9Y2Z0 365 aa14□□□□□ -0.17
HPS4-212ENST00000481910 ZC3H4Q9UPT8 1303 aaKnown RBP14□□□□□ -0.17
HPS4-212ENST00000481910 DDX24Q9GZR7 859 aaKnown RBP eCLIP14□□□□□ -0.17
HPS4-212ENST00000481910 TTF2Q9UNY4 1162 aaKnown RBP14□□□□□ -0.17
HPS4-212ENST00000481910 AK9Q5TCS8 1911 aa13.99□□□□□ -0.17
HPS4-212ENST00000481910 RRP9O43818 475 aaKnown RBP13.99□□□□□ -0.17
HPS4-212ENST00000481910 DDNO94850 711 aaPredicted RBP13.99□□□□□ -0.17
HPS4-212ENST00000481910 MECOMQ03112 1051 aa13.99□□□□□ -0.17
HPS4-212ENST00000481910 SLC9C2Q5TAH2 1124 aa13.99□□□□□ -0.17
HPS4-212ENST00000481910 DZIP1Q86YF9 867 aaKnown RBP13.99□□□□□ -0.17
HPS4-212ENST00000481910 ZNF646O15015 1829 aaPredicted RBP13.99□□□□□ -0.17
HPS4-212ENST00000481910 RPS12P25398 132 aaKnown RBP13.98□□□□□ -0.17
HPS4-212ENST00000481910 LRRFIP1Q32MZ4 808 aaKnown RBP13.98□□□□□ -0.17
HPS4-212ENST00000481910 OGFOD1Q8N543 542 aa13.98□□□□□ -0.17
HPS4-212ENST00000481910 GMLQ99445 158 aa13.98□□□□□ -0.17
HPS4-212ENST00000481910 USP17L8P0C7I0 530 aa13.98□□□□□ -0.17
HPS4-212ENST00000481910 GMPSP49915 693 aaPredicted RBP13.98□□□□□ -0.17
HPS4-212ENST00000481910 SCNN1DP51172 638 aa13.98□□□□□ -0.17
HPS4-212ENST00000481910 ZSCAN25Q6NSZ9 544 aa13.98□□□□□ -0.17
HPS4-212ENST00000481910 MAGEB6Q8N7X4 407 aa13.98□□□□□ -0.17
HPS4-212ENST00000481910 NSUN4Q96CB9 384 aaKnown RBP13.98□□□□□ -0.17
HPS4-212ENST00000481910 DOCK2Q92608 1830 aa13.97□□□□□ -0.17
HPS4-212ENST00000481910 MAST3O60307 1309 aa13.97□□□□□ -0.17
HPS4-212ENST00000481910 GLTPD2A6NH11 291 aa13.97□□□□□ -0.17
HPS4-212ENST00000481910 IGSF3O75054 1194 aa13.97□□□□□ -0.17
HPS4-212ENST00000481910 NAA16Q6N069 864 aaPredicted RBP13.97□□□□□ -0.17
HPS4-212ENST00000481910 DPF2Q92785 391 aa13.97□□□□□ -0.17
HPS4-212ENST00000481910 HDAC9Q9UKV0 1011 aa13.97□□□□□ -0.17
HPS4-212ENST00000481910 RNF113AO15541 343 aaKnown RBP13.96□□□□□ -0.17
HPS4-212ENST00000481910 ZFYP08048 801 aaPredicted RBP13.96□□□□□ -0.17
HPS4-212ENST00000481910 PDE6AP16499 860 aa13.96□□□□□ -0.17
HPS4-212ENST00000481910 ADD2P35612 726 aa13.96□□□□□ -0.17
HPS4-212ENST00000481910 GSTO1P78417 241 aa13.96□□□□□ -0.17
HPS4-212ENST00000481910 DIXDC1Q155Q3 683 aa13.96□□□□□ -0.17
HPS4-212ENST00000481910 SLF2Q8IX21 1173 aa13.96□□□□□ -0.17
HPS4-212ENST00000481910 IL27Q8NEV9 243 aa13.96□□□□□ -0.17
HPS4-212ENST00000481910 ZNF384Q8TF68 577 aa13.96□□□□□ -0.17
HPS4-212ENST00000481910 CNOT7Q9UIV1 285 aaKnown RBP13.96□□□□□ -0.17
HPS4-212ENST00000481910 MYH7P12883 1935 aa13.96□□□□□ -0.17
HPS4-212ENST00000481910 CHGBP05060 677 aa13.96□□□□□ -0.18
HPS4-212ENST00000481910 CYP7A1P22680 504 aa13.96□□□□□ -0.18
HPS4-212ENST00000481910 RBM5P52756 815 aaKnown RBP eCLIP13.96□□□□□ -0.18
HPS4-212ENST00000481910 SLFNL1Q499Z3 407 aa13.96□□□□□ -0.18
HPS4-212ENST00000481910 TICAM2Q86XR7 235 aa13.96□□□□□ -0.18
HPS4-212ENST00000481910 ZNF532Q9HCE3 1301 aa13.95□□□□□ -0.18
HPS4-212ENST00000481910 MYH2Q9UKX2 1941 aa13.95□□□□□ -0.18
HPS4-212ENST00000481910 LDHCP07864 332 aa13.95□□□□□ -0.18
HPS4-212ENST00000481910 UBE3CQ15386 1083 aa13.95□□□□□ -0.18
HPS4-212ENST00000481910 MICALL2Q8IY33 904 aa13.95□□□□□ -0.18
HPS4-212ENST00000481910 TEKT1Q969V4 418 aa13.95□□□□□ -0.18
HPS4-212ENST00000481910 MRIQ9BWK5 157 aa13.95□□□□□ -0.18
HPS4-212ENST00000481910 DIAPH3Q9NSV4 1193 aa13.95□□□□□ -0.18
HPS4-212ENST00000481910 H7C1D1 291 aa13.94□□□□□ -0.18
HPS4-212ENST00000481910 HIP1O00291 1037 aa13.94□□□□□ -0.18
HPS4-212ENST00000481910 HDLBPQ00341 1268 aaKnown RBP13.94□□□□□ -0.18
HPS4-212ENST00000481910 TMED8Q6PL24 325 aaPredicted RBP13.94□□□□□ -0.18
HPS4-212ENST00000481910 HHIPL2Q6UWX4 724 aa13.94□□□□□ -0.18
HPS4-212ENST00000481910 GPRC5DQ9NZD1 345 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms