RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 TBC1D16Q8TBP0 767 aa11.57□□□□□ -0.56
HLA-B-253ENST00000481849 CAPNS2Q96L46 248 aa11.57□□□□□ -0.56
HLA-B-253ENST00000481849 EYA3Q99504 573 aa11.57□□□□□ -0.56
HLA-B-253ENST00000481849 COL25A1Q9BXS0 654 aaPredicted RBP11.57□□□□□ -0.56
HLA-B-253ENST00000481849 ANKIB1Q9P2G1 1089 aa11.57□□□□□ -0.56
HLA-B-253ENST00000481849 MAP3K2Q9Y2U5 619 aa11.57□□□□□ -0.56
HLA-B-253ENST00000481849 DUOX1Q9NRD9 1551 aa11.57□□□□□ -0.56
HLA-B-253ENST00000481849 RANBP2P49792 3224 aaKnown RBP11.57□□□□□ -0.56
HLA-B-253ENST00000481849 SEMA3EO15041 775 aa11.56□□□□□ -0.56
HLA-B-253ENST00000481849 PDE8AO60658 829 aa11.56□□□□□ -0.56
HLA-B-253ENST00000481849 AOC2O75106 756 aa11.56□□□□□ -0.56
HLA-B-253ENST00000481849 UFL1O94874 794 aa11.56□□□□□ -0.56
HLA-B-253ENST00000481849 PCCAP05165 728 aaPredicted RBP11.56□□□□□ -0.56
HLA-B-253ENST00000481849 GGCXP38435 758 aa11.56□□□□□ -0.56
HLA-B-253ENST00000481849 CCDC152Q4G0S7 254 aa11.56□□□□□ -0.56
HLA-B-253ENST00000481849 TBC1D10BQ4KMP7 808 aaPredicted RBP11.56□□□□□ -0.56
HLA-B-253ENST00000481849 USP48Q86UV5 1035 aa11.56□□□□□ -0.56
HLA-B-253ENST00000481849 CCDC191Q8NCU4 936 aa11.56□□□□□ -0.56
HLA-B-253ENST00000481849 NKX2-3Q8TAU0 364 aa11.56□□□□□ -0.56
HLA-B-253ENST00000481849 METTL22Q9BUU2 404 aaPredicted RBP11.56□□□□□ -0.56
HLA-B-253ENST00000481849 ZC3H12CQ9C0D7 883 aaKnown RBP11.56□□□□□ -0.56
HLA-B-253ENST00000481849 SALL2Q9Y467 1007 aaPredicted RBP11.56□□□□□ -0.56
HLA-B-253ENST00000481849 TLL2Q9Y6L7 1015 aa11.56□□□□□ -0.56
HLA-B-253ENST00000481849 LAMB2P55268 1798 aa11.56□□□□□ -0.56
HLA-B-253ENST00000481849 PI4KAP2A4QPH2 592 aa11.55□□□□□ -0.56
HLA-B-253ENST00000481849 EGFRP00533 1210 aa11.55□□□□□ -0.56
HLA-B-253ENST00000481849 HSP90B1P14625 803 aaKnown RBP11.55□□□□□ -0.56
HLA-B-253ENST00000481849 ECE1P42892 770 aa11.55□□□□□ -0.56
HLA-B-253ENST00000481849 PI4KAP1Q8N8J0 262 aa11.55□□□□□ -0.56
HLA-B-253ENST00000481849 STK31Q9BXU1 1019 aa11.55□□□□□ -0.56
HLA-B-253ENST00000481849 PRDM6Q9NQX0 595 aa11.55□□□□□ -0.56
HLA-B-253ENST00000481849 ADGRG1Q9Y653 693 aa11.55□□□□□ -0.56
HLA-B-253ENST00000481849 CDHR2Q9BYE9 1310 aa11.55□□□□□ -0.56
HLA-B-253ENST00000481849 RTL9Q8NET4 1388 aa11.54□□□□□ -0.56
HLA-B-253ENST00000481849 GFRA3O60609 400 aa11.54□□□□□ -0.56
HLA-B-253ENST00000481849 CWF19L2Q2TBE0 894 aaKnown RBP11.54□□□□□ -0.56
HLA-B-253ENST00000481849 TWISTNBQ3B726 338 aaPredicted RBP11.54□□□□□ -0.56
HLA-B-253ENST00000481849 KSR2Q6VAB6 950 aa11.54□□□□□ -0.56
HLA-B-253ENST00000481849 CDC37L1Q7L3B6 337 aa11.54□□□□□ -0.56
HLA-B-253ENST00000481849 G2E3Q7L622 706 aa11.54□□□□□ -0.56
HLA-B-253ENST00000481849 ZC3H15Q8WU90 426 aaKnown RBP11.54□□□□□ -0.56
HLA-B-253ENST00000481849 MRS2Q9HD23 443 aa11.54□□□□□ -0.56
HLA-B-253ENST00000481849 PGAP2Q9UHJ9 254 aa11.54□□□□□ -0.56
HLA-B-253ENST00000481849 GGA1Q9UJY5 639 aa11.54□□□□□ -0.56
HLA-B-253ENST00000481849 PCDHB3Q9Y5E6 796 aa11.54□□□□□ -0.56
HLA-B-253ENST00000481849 DDX60Q8IY21 1712 aaKnown RBP11.54□□□□□ -0.56
HLA-B-253ENST00000481849 IGKV5-2P06315 115 aa11.53□□□□□ -0.56
HLA-B-253ENST00000481849 PLA2G5P39877 138 aa11.53□□□□□ -0.56
HLA-B-253ENST00000481849 SAPCD2Q86UD0 394 aa11.53□□□□□ -0.56
HLA-B-253ENST00000481849 ANKRD18AQ8IVF6 992 aa11.53□□□□□ -0.56
HLA-B-253ENST00000481849 WWC1Q8IX03 1113 aa11.53□□□□□ -0.56
HLA-B-253ENST00000481849 DPF2Q92785 391 aa11.53□□□□□ -0.56
HLA-B-253ENST00000481849 BEGAINQ9BUH8 593 aa11.53□□□□□ -0.56
HLA-B-253ENST00000481849 WTIPA6NIX2 430 aaPredicted RBP11.52□□□□□ -0.57
HLA-B-253ENST00000481849 ADM5C9JUS6 153 aa11.52□□□□□ -0.57
HLA-B-253ENST00000481849 CTSWP56202 376 aa11.52□□□□□ -0.57
HLA-B-253ENST00000481849 NEXNQ0ZGT2 675 aa11.52□□□□□ -0.57
HLA-B-253ENST00000481849 KRT26Q7Z3Y9 468 aa11.52□□□□□ -0.57
HLA-B-253ENST00000481849 CHMP4AQ9BY43 222 aa11.52□□□□□ -0.57
HLA-B-253ENST00000481849 PODXL2Q9NZ53 605 aa11.52□□□□□ -0.57
HLA-B-253ENST00000481849 V9GY48 417 aaPredicted RBP11.52□□□□□ -0.57
HLA-B-253ENST00000481849 TAF1P21675 1872 aa11.52□□□□□ -0.57
HLA-B-253ENST00000481849 RCCD1A6NED2 376 aa11.51□□□□□ -0.57
HLA-B-253ENST00000481849 RPS12P25398 132 aaKnown RBP11.51□□□□□ -0.57
HLA-B-253ENST00000481849 KIF4BQ2VIQ3 1234 aa11.51□□□□□ -0.57
HLA-B-253ENST00000481849 UBE3BQ7Z3V4 1068 aa11.51□□□□□ -0.57
HLA-B-253ENST00000481849 DCPSQ96C86 337 aaKnown RBP11.51□□□□□ -0.57
HLA-B-253ENST00000481849 CDC5LQ99459 802 aaKnown RBP11.51□□□□□ -0.57
HLA-B-253ENST00000481849 TMEM134Q9H6X4 195 aa11.51□□□□□ -0.57
HLA-B-253ENST00000481849 GREM2Q9H772 168 aa11.51□□□□□ -0.57
HLA-B-253ENST00000481849 ASTN2O75129 1339 aaPredicted RBP11.51□□□□□ -0.57
HLA-B-253ENST00000481849 LRRC37AA6NMS7 1700 aa11.51□□□□□ -0.57
HLA-B-253ENST00000481849 BRCA2P51587 3418 aa11.51□□□□□ -0.57
HLA-B-253ENST00000481849 PKD1L2Q7Z442 2459 aa11.5□□□□□ -0.57
HLA-B-253ENST00000481849 NEURL1BA8MQ27 555 aa11.5□□□□□ -0.57
HLA-B-253ENST00000481849 VIL1P09327 827 aaKnown RBP11.5□□□□□ -0.57
HLA-B-253ENST00000481849 ATP2B4P23634 1241 aa11.5□□□□□ -0.57
HLA-B-253ENST00000481849 HUNKP57058 714 aa11.5□□□□□ -0.57
HLA-B-253ENST00000481849 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
HLA-B-253ENST00000481849 TTLL11Q8NHH1 800 aa11.5□□□□□ -0.57
HLA-B-253ENST00000481849 GGA3Q9NZ52 723 aa11.5□□□□□ -0.57
HLA-B-253ENST00000481849 XDHP47989 1333 aa11.5□□□□□ -0.57
HLA-B-253ENST00000481849 FANCIQ9NVI1 1328 aa11.5□□□□□ -0.57
HLA-B-253ENST00000481849 ANP32CO43423 234 aa11.49□□□□□ -0.57
HLA-B-253ENST00000481849 MAP2K2P36507 400 aa11.49□□□□□ -0.57
HLA-B-253ENST00000481849 FLIIQ13045 1269 aa11.49□□□□□ -0.57
HLA-B-253ENST00000481849 FKBP5Q13451 457 aaPredicted RBP11.49□□□□□ -0.57
HLA-B-253ENST00000481849 KMT5BQ4FZB7 885 aa11.49□□□□□ -0.57
HLA-B-253ENST00000481849 RSBN1LQ6PCB5 846 aaPredicted RBP11.49□□□□□ -0.57
HLA-B-253ENST00000481849 ZIC5Q96T25 663 aa11.49□□□□□ -0.57
HLA-B-253ENST00000481849 MINPP1Q9UNW1 487 aa11.49□□□□□ -0.57
HLA-B-253ENST00000481849 PIEZO1Q92508 2521 aa11.49□□□□□ -0.57
HLA-B-253ENST00000481849 TTC28Q96AY4 2481 aa11.48□□□□□ -0.57
HLA-B-253ENST00000481849 H7C1W4 665 aa11.48□□□□□ -0.57
HLA-B-253ENST00000481849 EXOSC9Q06265 439 aaKnown RBP11.48□□□□□ -0.57
HLA-B-253ENST00000481849 SCARF1Q14162 830 aa11.48□□□□□ -0.57
HLA-B-253ENST00000481849 ANGEL2Q5VTE6 544 aaKnown RBP11.48□□□□□ -0.57
HLA-B-253ENST00000481849 SMYD5Q6GMV2 418 aa11.48□□□□□ -0.57
HLA-B-253ENST00000481849 BLOC1S3Q6QNY0 202 aa11.48□□□□□ -0.57
HLA-B-253ENST00000481849 SULF1Q8IWU6 871 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms