RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 NSFL1CQ9UNZ2 370 aaKnown RBP18.64■□□□□ 0.57
RXRA-202ENST00000481739 COL11A2P13942 1736 aaPredicted RBP18.64■□□□□ 0.57
RXRA-202ENST00000481739 ZMYM6O95789 1325 aa18.64■□□□□ 0.57
RXRA-202ENST00000481739 WDR19Q8NEZ3 1342 aa18.64■□□□□ 0.57
RXRA-202ENST00000481739 F13A1P00488 732 aa18.63■□□□□ 0.57
RXRA-202ENST00000481739 MRE11P49959 708 aa18.63■□□□□ 0.57
RXRA-202ENST00000481739 GPSM2P81274 684 aa18.63■□□□□ 0.57
RXRA-202ENST00000481739 FGD1P98174 961 aa18.63■□□□□ 0.57
RXRA-202ENST00000481739 EXOSC10Q01780 885 aaKnown RBP18.63■□□□□ 0.57
RXRA-202ENST00000481739 Q6ZUG5 572 aa18.63■□□□□ 0.57
RXRA-202ENST00000481739 STOX1Q6ZVD7 989 aa18.63■□□□□ 0.57
RXRA-202ENST00000481739 TMC4Q7Z404 712 aa18.63■□□□□ 0.57
RXRA-202ENST00000481739 PUS7LQ9H0K6 701 aaKnown RBP18.63■□□□□ 0.57
RXRA-202ENST00000481739 IDH1O75874 414 aaKnown RBP18.63■□□□□ 0.57
RXRA-202ENST00000481739 SLFNL1Q499Z3 407 aa18.63■□□□□ 0.57
RXRA-202ENST00000481739 PIH1D3Q9NQM4 214 aaKnown RBP18.63■□□□□ 0.57
RXRA-202ENST00000481739 IQSEC3Q9UPP2 1182 aaPredicted RBP18.63■□□□□ 0.57
RXRA-202ENST00000481739 ATF5Q9Y2D1 282 aaPredicted RBP18.63■□□□□ 0.57
RXRA-202ENST00000481739 LEMD3Q9Y2U8 911 aa18.63■□□□□ 0.57
RXRA-202ENST00000481739 PDE6AP16499 860 aa18.62■□□□□ 0.57
RXRA-202ENST00000481739 KLRK1P26718 216 aa18.62■□□□□ 0.57
RXRA-202ENST00000481739 RASGRF1Q13972 1273 aa18.62■□□□□ 0.57
RXRA-202ENST00000481739 TMX4Q9H1E5 349 aaPredicted RBP18.62■□□□□ 0.57
RXRA-202ENST00000481739 KIF3AQ9Y496 699 aa18.62■□□□□ 0.57
RXRA-202ENST00000481739 FGAP02671 866 aa18.61■□□□□ 0.57
RXRA-202ENST00000481739 NCLP19338 710 aaKnown RBP18.61■□□□□ 0.57
RXRA-202ENST00000481739 CHRNA5P30532 468 aa18.61■□□□□ 0.57
RXRA-202ENST00000481739 SP8Q8IXZ3 490 aa18.61■□□□□ 0.57
RXRA-202ENST00000481739 NECAB1Q8N987 351 aa18.61■□□□□ 0.57
RXRA-202ENST00000481739 FAM84BQ96KN1 310 aaPredicted RBP18.61■□□□□ 0.57
RXRA-202ENST00000481739 TCEANC2Q96MN5 208 aa18.61■□□□□ 0.57
RXRA-202ENST00000481739 MTMR6Q9Y217 621 aa18.61■□□□□ 0.57
RXRA-202ENST00000481739 CACNA1SQ13698 1873 aa18.61■□□□□ 0.57
RXRA-202ENST00000481739 FOXP2O15409 715 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 PFKFB2O60825 505 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 UFL1O94874 794 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 FOXD4L5Q5VV16 416 aaPredicted RBP18.6■□□□□ 0.57
RXRA-202ENST00000481739 STYK1Q6J9G0 422 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 FOXD4L4Q8WXT5 416 aaPredicted RBP18.6■□□□□ 0.57
RXRA-202ENST00000481739 GGA1Q9UJY5 639 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 ATP6V0A2Q9Y487 856 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 ZNF532Q9HCE3 1301 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 DOCK2Q92608 1830 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 TCRBV5S4A2TA0A5A2 114 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 ZNF213O14771 459 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 ZBTB22O15209 634 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 ATP2B4P23634 1241 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 POLD1P28340 1107 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 HIBADHP31937 336 aaKnown RBP18.6■□□□□ 0.57
RXRA-202ENST00000481739 ZNF445P59923 1031 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 ALX1Q15699 326 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 LARP1BQ659C4 914 aaKnown RBP18.6■□□□□ 0.57
RXRA-202ENST00000481739 BRF1Q92994 677 aa18.6■□□□□ 0.57
RXRA-202ENST00000481739 SYAP1Q96A49 352 aaPredicted RBP18.6■□□□□ 0.57
RXRA-202ENST00000481739 ZNF274Q96GC6 653 aaPredicted RBP18.6■□□□□ 0.57
RXRA-202ENST00000481739 PSDA5PKW4 1024 aaPredicted RBP18.59■□□□□ 0.57
RXRA-202ENST00000481739 GNAT2P19087 354 aa18.59■□□□□ 0.57
RXRA-202ENST00000481739 EVCP57679 992 aa18.59■□□□□ 0.57
RXRA-202ENST00000481739 HMGN5P82970 282 aaKnown RBP18.59■□□□□ 0.57
RXRA-202ENST00000481739 NCOA7Q8NI08 942 aa18.59■□□□□ 0.57
RXRA-202ENST00000481739 AIDAQ96BJ3 306 aa18.59■□□□□ 0.57
RXRA-202ENST00000481739 MTFR1LQ9H019 292 aa18.59■□□□□ 0.57
RXRA-202ENST00000481739 C6orf229H3BNL8 230 aa18.58■□□□□ 0.57
RXRA-202ENST00000481739 SEMA3EO15041 775 aa18.58■□□□□ 0.57
RXRA-202ENST00000481739 COL9A3Q14050 684 aaPredicted RBP18.58■□□□□ 0.57
RXRA-202ENST00000481739 TMED8Q6PL24 325 aaPredicted RBP18.58■□□□□ 0.57
RXRA-202ENST00000481739 FBXO33Q7Z6M2 555 aa18.58■□□□□ 0.57
RXRA-202ENST00000481739 KLHL34Q8N239 644 aa18.58■□□□□ 0.57
RXRA-202ENST00000481739 GPR101Q96P66 508 aaPredicted RBP18.58■□□□□ 0.57
RXRA-202ENST00000481739 MCM5P33992 734 aa18.58■□□□□ 0.56
RXRA-202ENST00000481739 RALYLQ86SE5 291 aaKnown RBP18.58■□□□□ 0.56
RXRA-202ENST00000481739 TXNRD3Q86VQ6 643 aa18.58■□□□□ 0.56
RXRA-202ENST00000481739 CNKSR1Q969H4 720 aa18.58■□□□□ 0.56
RXRA-202ENST00000481739 ZNF219Q9P2Y4 722 aaPredicted RBP18.58■□□□□ 0.56
RXRA-202ENST00000481739 PDS5AQ29RF7 1337 aaKnown RBP18.57■□□□□ 0.56
RXRA-202ENST00000481739 C10orf71Q711Q0 1435 aa18.57■□□□□ 0.56
RXRA-202ENST00000481739 TRDNQ13061 729 aa18.57■□□□□ 0.56
RXRA-202ENST00000481739 CAVIN1Q6NZI2 390 aaKnown RBP18.57■□□□□ 0.56
RXRA-202ENST00000481739 OLFM4Q6UX06 510 aa18.57■□□□□ 0.56
RXRA-202ENST00000481739 GPT2Q8TD30 523 aa18.57■□□□□ 0.56
RXRA-202ENST00000481739 PODXL2Q9NZ53 605 aa18.57■□□□□ 0.56
RXRA-202ENST00000481739 WWC3Q9ULE0 1092 aa18.57■□□□□ 0.56
RXRA-202ENST00000481739 DENND2AQ9ULE3 1009 aa18.57■□□□□ 0.56
RXRA-202ENST00000481739 LAMA4Q16363 1823 aa18.57■□□□□ 0.56
RXRA-202ENST00000481739 IGSF3O75054 1194 aa18.56■□□□□ 0.56
RXRA-202ENST00000481739 TTLL5Q6EMB2 1281 aa18.56■□□□□ 0.56
RXRA-202ENST00000481739 MPNDQ8N594 471 aa18.56■□□□□ 0.56
RXRA-202ENST00000481739 SMARCC2Q8TAQ2 1214 aa18.56■□□□□ 0.56
RXRA-202ENST00000481739 TBC1D16Q8TBP0 767 aa18.56■□□□□ 0.56
RXRA-202ENST00000481739 STRBPQ96SI9 672 aaKnown RBP18.56■□□□□ 0.56
RXRA-202ENST00000481739 MYO5AQ9Y4I1 1855 aaKnown RBP18.56■□□□□ 0.56
RXRA-202ENST00000481739 LRRC37AA6NMS7 1700 aa18.56■□□□□ 0.56
RXRA-202ENST00000481739 VPS37CA5D8V6 355 aaPredicted RBP18.56■□□□□ 0.56
RXRA-202ENST00000481739 ZNF804AQ7Z570 1209 aa18.56■□□□□ 0.56
RXRA-202ENST00000481739 MB21D2Q8IYB1 491 aaPredicted RBP18.56■□□□□ 0.56
RXRA-202ENST00000481739 GRPEL1Q9HAV7 217 aa18.56■□□□□ 0.56
RXRA-202ENST00000481739 POLLQ9UGP5 575 aa18.56■□□□□ 0.56
RXRA-202ENST00000481739 MYH13Q9UKX3 1938 aa18.56■□□□□ 0.56
RXRA-202ENST00000481739 CHAF1AQ13111 956 aaPredicted RBP18.55■□□□□ 0.56
RXRA-202ENST00000481739 STK3Q13188 491 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms