RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 RBBP6Q7Z6E9 1792 aaKnown RBP11.49□□□□□ -0.57
CLIP4-210ENST00000481628 PDE8BO95263 885 aa11.48□□□□□ -0.57
CLIP4-210ENST00000481628 CRKP46108 304 aa11.48□□□□□ -0.57
CLIP4-210ENST00000481628 RBM5P52756 815 aaKnown RBP eCLIP11.48□□□□□ -0.57
CLIP4-210ENST00000481628 PRPF38BQ5VTL8 546 aaKnown RBP11.48□□□□□ -0.57
CLIP4-210ENST00000481628 TBC1D22AQ8WUA7 517 aa11.48□□□□□ -0.57
CLIP4-210ENST00000481628 MS4A4AQ96JQ5 239 aa11.48□□□□□ -0.57
CLIP4-210ENST00000481628 MRIQ9BWK5 157 aa11.48□□□□□ -0.57
CLIP4-210ENST00000481628 TDRD3Q9H7E2 651 aaKnown RBP11.48□□□□□ -0.57
CLIP4-210ENST00000481628 SUGT1Q9Y2Z0 365 aa11.48□□□□□ -0.57
CLIP4-210ENST00000481628 FGFR2P21802 821 aa11.47□□□□□ -0.57
CLIP4-210ENST00000481628 GRIK5Q16478 980 aa11.47□□□□□ -0.57
CLIP4-210ENST00000481628 LRRC24Q50LG9 513 aa11.47□□□□□ -0.57
CLIP4-210ENST00000481628 OTUD7BQ6GQQ9 843 aa11.47□□□□□ -0.57
CLIP4-210ENST00000481628 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.47□□□□□ -0.57
CLIP4-210ENST00000481628 OTOP1Q7RTM1 612 aa11.47□□□□□ -0.57
CLIP4-210ENST00000481628 CDAN1Q8IWY9 1227 aa11.47□□□□□ -0.57
CLIP4-210ENST00000481628 FAM9BQ8IZU0 186 aa11.47□□□□□ -0.57
CLIP4-210ENST00000481628 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLIP4-210ENST00000481628 PTPN18Q99952 460 aa11.47□□□□□ -0.57
CLIP4-210ENST00000481628 E9PSI1 815 aa11.46□□□□□ -0.57
CLIP4-210ENST00000481628 ZBTB22O15209 634 aa11.46□□□□□ -0.57
CLIP4-210ENST00000481628 TNNI2P48788 182 aa11.46□□□□□ -0.57
CLIP4-210ENST00000481628 CRHR2Q13324 411 aa11.46□□□□□ -0.57
CLIP4-210ENST00000481628 CAVIN4Q5BKX8 364 aa11.46□□□□□ -0.57
CLIP4-210ENST00000481628 METTL24Q5JXM2 366 aa11.46□□□□□ -0.57
CLIP4-210ENST00000481628 FKBP1CQ5VVH2 108 aa11.46□□□□□ -0.57
CLIP4-210ENST00000481628 OPTNQ96CV9 577 aa11.46□□□□□ -0.57
CLIP4-210ENST00000481628 ERO1AQ96HE7 468 aa11.46□□□□□ -0.57
CLIP4-210ENST00000481628 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.57
CLIP4-210ENST00000481628 USP44Q9H0E7 712 aa11.46□□□□□ -0.57
CLIP4-210ENST00000481628 MAST3O60307 1309 aa11.45□□□□□ -0.58
CLIP4-210ENST00000481628 RFX5P48382 616 aaPredicted RBP11.45□□□□□ -0.58
CLIP4-210ENST00000481628 VGLL4Q14135 290 aa11.45□□□□□ -0.58
CLIP4-210ENST00000481628 PUM3Q15397 648 aaKnown RBP11.45□□□□□ -0.58
CLIP4-210ENST00000481628 ALDH1L2Q3SY69 923 aa11.45□□□□□ -0.58
CLIP4-210ENST00000481628 INTS3Q68E01 1043 aaKnown RBP11.45□□□□□ -0.58
CLIP4-210ENST00000481628 FAM83AQ86UY5 434 aa11.45□□□□□ -0.58
CLIP4-210ENST00000481628 SSH1Q8WYL5 1049 aa11.45□□□□□ -0.58
CLIP4-210ENST00000481628 TEKT1Q969V4 418 aa11.45□□□□□ -0.58
CLIP4-210ENST00000481628 TMEM39BQ9GZU3 492 aa11.45□□□□□ -0.58
CLIP4-210ENST00000481628 ELP3Q9H9T3 547 aa11.45□□□□□ -0.58
CLIP4-210ENST00000481628 TRIM17Q9Y577 477 aa11.45□□□□□ -0.58
CLIP4-210ENST00000481628 SPDYE5A6NIY4 337 aa11.44□□□□□ -0.58
CLIP4-210ENST00000481628 TCP10L2B9ZVM9 353 aa11.44□□□□□ -0.58
CLIP4-210ENST00000481628 GTF2A2P52657 109 aa11.44□□□□□ -0.58
CLIP4-210ENST00000481628 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
CLIP4-210ENST00000481628 SLFN5Q08AF3 891 aa11.44□□□□□ -0.58
CLIP4-210ENST00000481628 APOBEC3HQ6NTF7 200 aaKnown RBP11.44□□□□□ -0.58
CLIP4-210ENST00000481628 HHIPL2Q6UWX4 724 aa11.44□□□□□ -0.58
CLIP4-210ENST00000481628 VPS37DQ86XT2 251 aa11.44□□□□□ -0.58
CLIP4-210ENST00000481628 BRI3BPQ8WY22 251 aa11.44□□□□□ -0.58
CLIP4-210ENST00000481628 ARMC5Q96C12 935 aa11.44□□□□□ -0.58
CLIP4-210ENST00000481628 ZCCHC17Q9NP64 241 aaKnown RBP11.44□□□□□ -0.58
CLIP4-210ENST00000481628 FBXO3Q9UK99 471 aa11.44□□□□□ -0.58
CLIP4-210ENST00000481628 PTPN22Q9Y2R2 807 aa11.44□□□□□ -0.58
CLIP4-210ENST00000481628 EYA2O00167 538 aa11.43□□□□□ -0.58
CLIP4-210ENST00000481628 IFIT1P09914 478 aaKnown RBP11.43□□□□□ -0.58
CLIP4-210ENST00000481628 BCAMP50895 628 aa11.43□□□□□ -0.58
CLIP4-210ENST00000481628 CAP1Q01518 475 aa11.43□□□□□ -0.58
CLIP4-210ENST00000481628 SP3Q02447 781 aa11.43□□□□□ -0.58
CLIP4-210ENST00000481628 CHAF1AQ13111 956 aaPredicted RBP11.43□□□□□ -0.58
CLIP4-210ENST00000481628 KLHDC4Q8TBB5 520 aa11.43□□□□□ -0.58
CLIP4-210ENST00000481628 CD99L2Q8TCZ2 262 aa11.43□□□□□ -0.58
CLIP4-210ENST00000481628 CNKSR2Q8WXI2 1034 aa11.43□□□□□ -0.58
CLIP4-210ENST00000481628 PCDH10Q9P2E7 1040 aa11.43□□□□□ -0.58
CLIP4-210ENST00000481628 IQSEC3Q9UPP2 1182 aaPredicted RBP11.43□□□□□ -0.58
CLIP4-210ENST00000481628 SNCAIPQ9Y6H5 919 aa11.43□□□□□ -0.58
CLIP4-210ENST00000481628 MYH13Q9UKX3 1938 aa11.43□□□□□ -0.58
CLIP4-210ENST00000481628 ATG9AQ7Z3C6 839 aa11.42□□□□□ -0.58
CLIP4-210ENST00000481628 TRMT2AQ8IZ69 625 aaKnown RBP11.42□□□□□ -0.58
CLIP4-210ENST00000481628 LPIN2Q92539 896 aa11.42□□□□□ -0.58
CLIP4-210ENST00000481628 HOOK2Q96ED9 719 aa11.42□□□□□ -0.58
CLIP4-210ENST00000481628 EFCC1Q9HA90 598 aa11.42□□□□□ -0.58
CLIP4-210ENST00000481628 TMOD2Q9NZR1 351 aa11.42□□□□□ -0.58
CLIP4-210ENST00000481628 CSADQ9Y600 493 aa11.42□□□□□ -0.58
CLIP4-210ENST00000481628 SALL1Q9NSC2 1324 aa11.41□□□□□ -0.58
CLIP4-210ENST00000481628 CCL15-CCL14A0A0B4J2E2 113 aa11.41□□□□□ -0.58
CLIP4-210ENST00000481628 FRAT2O75474 233 aaPredicted RBP11.41□□□□□ -0.58
CLIP4-210ENST00000481628 CIAO1O76071 339 aa11.41□□□□□ -0.58
CLIP4-210ENST00000481628 CT47B1P0C2W7 299 aaPredicted RBP11.41□□□□□ -0.58
CLIP4-210ENST00000481628 SLC5A1P13866 664 aa11.41□□□□□ -0.58
CLIP4-210ENST00000481628 CACNB3P54284 484 aa11.41□□□□□ -0.58
CLIP4-210ENST00000481628 CCL15Q16663 113 aa11.41□□□□□ -0.58
CLIP4-210ENST00000481628 ERO1BQ86YB8 467 aa11.41□□□□□ -0.58
CLIP4-210ENST00000481628 FAM43AQ8N2R8 423 aa11.41□□□□□ -0.58
CLIP4-210ENST00000481628 WDR66Q8TBY9 1149 aa11.41□□□□□ -0.58
CLIP4-210ENST00000481628 ZFYVE28Q9HCC9 887 aa11.41□□□□□ -0.58
CLIP4-210ENST00000481628 POTEFA5A3E0 1075 aa11.4□□□□□ -0.58
CLIP4-210ENST00000481628 CETPP11597 493 aa11.4□□□□□ -0.58
CLIP4-210ENST00000481628 PPIL2Q13356 520 aa11.4□□□□□ -0.58
CLIP4-210ENST00000481628 TAF1CQ15572 869 aaPredicted RBP11.4□□□□□ -0.58
CLIP4-210ENST00000481628 DCAF15Q66K64 600 aa11.4□□□□□ -0.58
CLIP4-210ENST00000481628 OTUD5Q96G74 571 aa11.4□□□□□ -0.58
CLIP4-210ENST00000481628 WRNIP1Q96S55 665 aa11.4□□□□□ -0.58
CLIP4-210ENST00000481628 ZNF112Q9UJU3 913 aa11.4□□□□□ -0.58
CLIP4-210ENST00000481628 RFX7Q2KHR2 1363 aa11.4□□□□□ -0.59
CLIP4-210ENST00000481628 SEMA3EO15041 775 aa11.39□□□□□ -0.59
CLIP4-210ENST00000481628 TLR2O60603 784 aa11.39□□□□□ -0.59
CLIP4-210ENST00000481628 ARHGEF6Q15052 776 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms