RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 LTBP3Q9NS15 1303 aa21.13■□□□□ 0.97
UPF3A-206ENST00000480362 IGSF3O75054 1194 aa21.13■□□□□ 0.97
UPF3A-206ENST00000480362 NAA16Q6N069 864 aaPredicted RBP21.13■□□□□ 0.97
UPF3A-206ENST00000480362 PTH1RQ03431 593 aa21.12■□□□□ 0.97
UPF3A-206ENST00000480362 STRIP1Q5VSL9 837 aa21.12■□□□□ 0.97
UPF3A-206ENST00000480362 DZIP1Q86YF9 867 aaKnown RBP21.12■□□□□ 0.97
UPF3A-206ENST00000480362 ZNF384Q8TF68 577 aa21.12■□□□□ 0.97
UPF3A-206ENST00000480362 TBC1D32Q96NH3 1257 aa21.12■□□□□ 0.97
UPF3A-206ENST00000480362 RBM19Q9Y4C8 960 aaKnown RBP21.12■□□□□ 0.97
UPF3A-206ENST00000480362 USP17L3A6NCW0 530 aa21.11■□□□□ 0.97
UPF3A-206ENST00000480362 USP17L4A6NCW7 530 aa21.11■□□□□ 0.97
UPF3A-206ENST00000480362 YDJCA8MPS7 323 aa21.11■□□□□ 0.97
UPF3A-206ENST00000480362 EPB41L2O43491 1005 aaKnown RBP21.11■□□□□ 0.97
UPF3A-206ENST00000480362 RASSF7Q02833 373 aa21.11■□□□□ 0.97
UPF3A-206ENST00000480362 USP17L1Q7RTZ2 530 aa21.11■□□□□ 0.97
UPF3A-206ENST00000480362 NIM1KQ8IY84 436 aa21.11■□□□□ 0.97
UPF3A-206ENST00000480362 MXD3Q9BW11 206 aa21.11■□□□□ 0.97
UPF3A-206ENST00000480362 TMED8Q6PL24 325 aaPredicted RBP21.1■□□□□ 0.97
UPF3A-206ENST00000480362 ARHGAP27Q6ZUM4 889 aa21.1■□□□□ 0.97
UPF3A-206ENST00000480362 ADGRA1Q86SQ6 560 aa21.1■□□□□ 0.97
UPF3A-206ENST00000480362 CERS5Q8N5B7 392 aa21.1■□□□□ 0.97
UPF3A-206ENST00000480362 CCDC88AQ3V6T2 1871 aa21.09■□□□□ 0.97
UPF3A-206ENST00000480362 COL4A5P29400 1685 aa21.09■□□□□ 0.97
UPF3A-206ENST00000480362 GPAA1O43292 621 aa21.09■□□□□ 0.97
UPF3A-206ENST00000480362 RBM25P49756 843 aaKnown RBP21.09■□□□□ 0.97
UPF3A-206ENST00000480362 GSTO1P78417 241 aa21.09■□□□□ 0.97
UPF3A-206ENST00000480362 DACT2Q5SW24 774 aa21.09■□□□□ 0.97
UPF3A-206ENST00000480362 MAP4K1Q92918 833 aa21.09■□□□□ 0.97
UPF3A-206ENST00000480362 AIDAQ96BJ3 306 aa21.09■□□□□ 0.97
UPF3A-206ENST00000480362 ZNRF3Q9ULT6 936 aa21.09■□□□□ 0.97
UPF3A-206ENST00000480362 SUGT1Q9Y2Z0 365 aa21.09■□□□□ 0.97
UPF3A-206ENST00000480362 SCN9AQ15858 1988 aa21.08■□□□□ 0.97
UPF3A-206ENST00000480362 FKBP1AP62942 108 aaKnown RBP21.08■□□□□ 0.97
UPF3A-206ENST00000480362 MIGA1Q8NAN2 632 aa21.08■□□□□ 0.97
UPF3A-206ENST00000480362 JDP2Q8WYK2 163 aa21.08■□□□□ 0.97
UPF3A-206ENST00000480362 MAST2Q6P0Q8 1798 aa21.08■□□□□ 0.96
UPF3A-206ENST00000480362 MAGEB6P1A0A0J9YX57 407 aa21.07■□□□□ 0.96
UPF3A-206ENST00000480362 MBD4O95243 580 aa21.07■□□□□ 0.96
UPF3A-206ENST00000480362 LDHCP07864 332 aa21.07■□□□□ 0.96
UPF3A-206ENST00000480362 VPS53Q5VIR6 699 aa21.07■□□□□ 0.96
UPF3A-206ENST00000480362 STRBPQ96SI9 672 aaKnown RBP21.07■□□□□ 0.96
UPF3A-206ENST00000480362 ARMT1Q9H993 441 aa21.07■□□□□ 0.96
UPF3A-206ENST00000480362 F8W031 263 aaPredicted RBP21.06■□□□□ 0.96
UPF3A-206ENST00000480362 RAD17O75943 681 aa21.06■□□□□ 0.96
UPF3A-206ENST00000480362 HSPD1P10809 573 aaKnown RBP21.06■□□□□ 0.96
UPF3A-206ENST00000480362 YBX3P16989 372 aaKnown RBP eCLIP21.06■□□□□ 0.96
UPF3A-206ENST00000480362 MCCP23508 829 aa21.06■□□□□ 0.96
UPF3A-206ENST00000480362 PRELPP51888 382 aa21.06■□□□□ 0.96
UPF3A-206ENST00000480362 DIXDC1Q155Q3 683 aa21.06■□□□□ 0.96
UPF3A-206ENST00000480362 LCORLQ8N3X6 602 aa21.06■□□□□ 0.96
UPF3A-206ENST00000480362 DSCC1Q9BVC3 393 aa21.06■□□□□ 0.96
UPF3A-206ENST00000480362 RBM8AQ9Y5S9 174 aaKnown RBP21.06■□□□□ 0.96
UPF3A-206ENST00000480362 HSPA4P34932 840 aa21.05■□□□□ 0.96
UPF3A-206ENST00000480362 DYNLL1P63167 89 aaKnown RBP21.05■□□□□ 0.96
UPF3A-206ENST00000480362 SLF2Q8IX21 1173 aa21.05■□□□□ 0.96
UPF3A-206ENST00000480362 RIOK1Q9BRS2 568 aaKnown RBP21.05■□□□□ 0.96
UPF3A-206ENST00000480362 TTF2Q9UNY4 1162 aaKnown RBP21.05■□□□□ 0.96
UPF3A-206ENST00000480362 ZNF646O15015 1829 aaPredicted RBP21.04■□□□□ 0.96
UPF3A-206ENST00000480362 U3KPZ7 1027 aaPredicted RBP21.04■□□□□ 0.96
UPF3A-206ENST00000480362 MROH7-TTC4A0A0A0MT08 1334 aa21.04■□□□□ 0.96
UPF3A-206ENST00000480362 PSMD14O00487 310 aa21.03■□□□□ 0.96
UPF3A-206ENST00000480362 FOXP2O15409 715 aa21.03■□□□□ 0.96
UPF3A-206ENST00000480362 VIL1P09327 827 aaKnown RBP21.03■□□□□ 0.96
UPF3A-206ENST00000480362 CXCL9Q07325 125 aa21.03■□□□□ 0.96
UPF3A-206ENST00000480362 NECTIN1Q15223 517 aa21.03■□□□□ 0.96
UPF3A-206ENST00000480362 KIAA0825Q8IV33 1275 aa21.03■□□□□ 0.96
UPF3A-206ENST00000480362 FAM163AQ96GL9 167 aaPredicted RBP21.03■□□□□ 0.96
UPF3A-206ENST00000480362 AATFQ9NY61 560 aaKnown RBP eCLIP21.03■□□□□ 0.96
UPF3A-206ENST00000480362 PSME4Q14997 1843 aa21.02■□□□□ 0.96
UPF3A-206ENST00000480362 PATL2C9JE40 543 aaKnown RBP21.02■□□□□ 0.96
UPF3A-206ENST00000480362 PRKAB2O43741 272 aa21.02■□□□□ 0.96
UPF3A-206ENST00000480362 BAG3O95817 575 aa21.02■□□□□ 0.96
UPF3A-206ENST00000480362 APPP05067 770 aa21.02■□□□□ 0.96
UPF3A-206ENST00000480362 GNAT2P19087 354 aa21.02■□□□□ 0.96
UPF3A-206ENST00000480362 SCNN1DP51172 638 aa21.02■□□□□ 0.96
UPF3A-206ENST00000480362 RSBN1LQ6PCB5 846 aaPredicted RBP21.02■□□□□ 0.96
UPF3A-206ENST00000480362 NOL10Q9BSC4 688 aaKnown RBP21.02■□□□□ 0.96
UPF3A-206ENST00000480362 SLC4A4Q9Y6R1 1079 aa21.02■□□□□ 0.96
UPF3A-206ENST00000480362 MYH2Q9UKX2 1941 aa21.02■□□□□ 0.95
UPF3A-206ENST00000480362 GPR75-ASB3A0A0A6YYF3 556 aa21.01■□□□□ 0.95
UPF3A-206ENST00000480362 PPP4CP60510 307 aa21.01■□□□□ 0.95
UPF3A-206ENST00000480362 CREB3L3Q68CJ9 461 aa21.01■□□□□ 0.95
UPF3A-206ENST00000480362 CIAPIN1Q6FI81 312 aa21.01■□□□□ 0.95
UPF3A-206ENST00000480362 KIF2CQ99661 725 aa21.01■□□□□ 0.95
UPF3A-206ENST00000480362 PALD1Q9ULE6 856 aa21.01■□□□□ 0.95
UPF3A-206ENST00000480362 GAKO14976 1311 aa21.01■□□□□ 0.95
UPF3A-206ENST00000480362 MYO3BQ8WXR4 1341 aa21.01■□□□□ 0.95
UPF3A-206ENST00000480362 GSG1L2A8MUP6 293 aa21■□□□□ 0.95
UPF3A-206ENST00000480362 FZD9O00144 591 aa21■□□□□ 0.95
UPF3A-206ENST00000480362 SLC27A2O14975 620 aa21■□□□□ 0.95
UPF3A-206ENST00000480362 FGAP02671 866 aa21■□□□□ 0.95
UPF3A-206ENST00000480362 LMNB1P20700 586 aa21■□□□□ 0.95
UPF3A-206ENST00000480362 BTDP43251 543 aa21■□□□□ 0.95
UPF3A-206ENST00000480362 TNIP1Q15025 636 aa21■□□□□ 0.95
UPF3A-206ENST00000480362 MRIQ9BWK5 157 aa21■□□□□ 0.95
UPF3A-206ENST00000480362 CTNNA3Q9UI47 895 aa21■□□□□ 0.95
UPF3A-206ENST00000480362 DAGLAQ9Y4D2 1042 aa21■□□□□ 0.95
UPF3A-206ENST00000480362 ANAPC15P60006 121 aa20.99■□□□□ 0.95
UPF3A-206ENST00000480362 HDLBPQ00341 1268 aaKnown RBP20.99■□□□□ 0.95
UPF3A-206ENST00000480362 GPR162Q16538 588 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms