RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 ZNF804BA4D1E1 1349 aa12.56□□□□□ -0.4
LINC00173-203ENST00000480237 CAVIN4Q5BKX8 364 aa12.56□□□□□ -0.4
LINC00173-203ENST00000480237 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC00173-203ENST00000480237 C10orf71Q711Q0 1435 aa12.55□□□□□ -0.4
LINC00173-203ENST00000480237 MYH15Q9Y2K3 1946 aa12.55□□□□□ -0.4
LINC00173-203ENST00000480237 KLRG2A4D1S0 409 aaPredicted RBP12.55□□□□□ -0.4
LINC00173-203ENST00000480237 PPEF1O14829 653 aaPredicted RBP12.55□□□□□ -0.4
LINC00173-203ENST00000480237 ZFYP08048 801 aaPredicted RBP12.55□□□□□ -0.4
LINC00173-203ENST00000480237 NPR1P16066 1061 aa12.55□□□□□ -0.4
LINC00173-203ENST00000480237 GYG1P46976 350 aa12.55□□□□□ -0.4
LINC00173-203ENST00000480237 BCAMP50895 628 aa12.55□□□□□ -0.4
LINC00173-203ENST00000480237 RASGRF1Q13972 1273 aa12.55□□□□□ -0.4
LINC00173-203ENST00000480237 ZSCAN25Q6NSZ9 544 aa12.55□□□□□ -0.4
LINC00173-203ENST00000480237 TMC4Q7Z404 712 aa12.55□□□□□ -0.4
LINC00173-203ENST00000480237 SPATA5Q8NB90 893 aa12.55□□□□□ -0.4
LINC00173-203ENST00000480237 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
LINC00173-203ENST00000480237 HMG20BQ9P0W2 317 aa12.55□□□□□ -0.4
LINC00173-203ENST00000480237 RNF113AO15541 343 aaKnown RBP12.54□□□□□ -0.4
LINC00173-203ENST00000480237 BBOX1O75936 387 aa12.54□□□□□ -0.4
LINC00173-203ENST00000480237 RABEP1Q15276 862 aa12.54□□□□□ -0.4
LINC00173-203ENST00000480237 TIAM2Q8IVF5 1701 aa12.54□□□□□ -0.4
LINC00173-203ENST00000480237 IDH1O75874 414 aaKnown RBP12.53□□□□□ -0.4
LINC00173-203ENST00000480237 CYP2E1P05181 493 aaPredicted RBP12.53□□□□□ -0.4
LINC00173-203ENST00000480237 SRGNP10124 158 aa12.53□□□□□ -0.4
LINC00173-203ENST00000480237 DSG2Q14126 1118 aa12.53□□□□□ -0.4
LINC00173-203ENST00000480237 MCMDC2Q4G0Z9 681 aa12.53□□□□□ -0.4
LINC00173-203ENST00000480237 ZMYM1Q5SVZ6 1142 aa12.53□□□□□ -0.4
LINC00173-203ENST00000480237 ZNF589Q86UQ0 364 aaPredicted RBP12.53□□□□□ -0.4
LINC00173-203ENST00000480237 C2CD5Q86YS7 1000 aa12.53□□□□□ -0.4
LINC00173-203ENST00000480237 HSCBQ8IWL3 235 aa12.53□□□□□ -0.4
LINC00173-203ENST00000480237 MASTLQ96GX5 879 aa12.53□□□□□ -0.4
LINC00173-203ENST00000480237 KIF2CQ99661 725 aa12.53□□□□□ -0.4
LINC00173-203ENST00000480237 PDGFDQ9GZP0 370 aaPredicted RBP12.53□□□□□ -0.4
LINC00173-203ENST00000480237 PIH1D3Q9NQM4 214 aaKnown RBP12.53□□□□□ -0.4
LINC00173-203ENST00000480237 HELLSQ9NRZ9 838 aa12.53□□□□□ -0.4
LINC00173-203ENST00000480237 WDR70Q9NW82 654 aa12.53□□□□□ -0.4
LINC00173-203ENST00000480237 IQSEC3Q9UPP2 1182 aaPredicted RBP12.53□□□□□ -0.4
LINC00173-203ENST00000480237 LEMD3Q9Y2U8 911 aa12.53□□□□□ -0.4
LINC00173-203ENST00000480237 MAST3O60307 1309 aa12.53□□□□□ -0.4
LINC00173-203ENST00000480237 WTIPA6NIX2 430 aaPredicted RBP12.52□□□□□ -0.4
LINC00173-203ENST00000480237 FRAT2O75474 233 aaPredicted RBP12.52□□□□□ -0.4
LINC00173-203ENST00000480237 UFL1O94874 794 aa12.52□□□□□ -0.4
LINC00173-203ENST00000480237 CHGBP05060 677 aa12.52□□□□□ -0.4
LINC00173-203ENST00000480237 KLRK1P26718 216 aa12.52□□□□□ -0.4
LINC00173-203ENST00000480237 HSPA4P34932 840 aa12.52□□□□□ -0.4
LINC00173-203ENST00000480237 ANAPC15P60006 121 aa12.52□□□□□ -0.4
LINC00173-203ENST00000480237 PTH1RQ03431 593 aa12.52□□□□□ -0.4
LINC00173-203ENST00000480237 WASHC4Q2M389 1173 aa12.52□□□□□ -0.4
LINC00173-203ENST00000480237 CCDC129Q6ZRS4 1044 aa12.52□□□□□ -0.4
LINC00173-203ENST00000480237 SLC51AQ86UW1 340 aa12.52□□□□□ -0.4
LINC00173-203ENST00000480237 SLC16A10Q8TF71 515 aa12.52□□□□□ -0.4
LINC00173-203ENST00000480237 DDX27Q96GQ7 796 aaKnown RBP12.52□□□□□ -0.4
LINC00173-203ENST00000480237 GGA1Q9UJY5 639 aa12.52□□□□□ -0.4
LINC00173-203ENST00000480237 H0YIN7 160 aa12.52□□□□□ -0.41
LINC00173-203ENST00000480237 ALDH1B1P30837 517 aa12.52□□□□□ -0.41
LINC00173-203ENST00000480237 GPSM2P81274 684 aa12.52□□□□□ -0.41
LINC00173-203ENST00000480237 ZNF622Q969S3 477 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC00173-203ENST00000480237 SEC62Q99442 399 aaKnown RBP12.52□□□□□ -0.41
LINC00173-203ENST00000480237 DENND2AQ9ULE3 1009 aa12.52□□□□□ -0.41
LINC00173-203ENST00000480237 PALD1Q9ULE6 856 aa12.52□□□□□ -0.41
LINC00173-203ENST00000480237 NSFL1CQ9UNZ2 370 aaKnown RBP12.52□□□□□ -0.41
LINC00173-203ENST00000480237 DDX60LQ5H9U9 1706 aaKnown RBP12.51□□□□□ -0.41
LINC00173-203ENST00000480237 SEMA3EO15041 775 aa12.51□□□□□ -0.41
LINC00173-203ENST00000480237 ATP2B4P23634 1241 aa12.51□□□□□ -0.41
LINC00173-203ENST00000480237 HIBADHP31937 336 aaKnown RBP12.51□□□□□ -0.41
LINC00173-203ENST00000480237 FOXK1P85037 733 aa12.51□□□□□ -0.41
LINC00173-203ENST00000480237 MAP3K12Q12852 859 aa12.51□□□□□ -0.41
LINC00173-203ENST00000480237 SLFNL1Q499Z3 407 aa12.51□□□□□ -0.41
LINC00173-203ENST00000480237 ERICH6Q7L0X2 663 aa12.51□□□□□ -0.41
LINC00173-203ENST00000480237 ZNF804AQ7Z570 1209 aa12.51□□□□□ -0.41
LINC00173-203ENST00000480237 FBXO33Q7Z6M2 555 aa12.51□□□□□ -0.41
LINC00173-203ENST00000480237 APPBP2Q92624 585 aa12.51□□□□□ -0.41
LINC00173-203ENST00000480237 FAM84BQ96KN1 310 aaPredicted RBP12.51□□□□□ -0.41
LINC00173-203ENST00000480237 TMX4Q9H1E5 349 aaPredicted RBP12.51□□□□□ -0.41
LINC00173-203ENST00000480237 RBM8AQ9Y5S9 174 aaKnown RBP12.51□□□□□ -0.41
LINC00173-203ENST00000480237 SBF1O95248 1867 aa12.51□□□□□ -0.41
LINC00173-203ENST00000480237 M0R2C6 588 aa12.5□□□□□ -0.41
LINC00173-203ENST00000480237 PDE6AP16499 860 aa12.5□□□□□ -0.41
LINC00173-203ENST00000480237 ADD2P35612 726 aa12.5□□□□□ -0.41
LINC00173-203ENST00000480237 SLC4A3P48751 1232 aa12.5□□□□□ -0.41
LINC00173-203ENST00000480237 PPP1R15BQ5SWA1 713 aa12.5□□□□□ -0.41
LINC00173-203ENST00000480237 SLC9C2Q5TAH2 1124 aa12.5□□□□□ -0.41
LINC00173-203ENST00000480237 STYK1Q6J9G0 422 aa12.5□□□□□ -0.41
LINC00173-203ENST00000480237 PRPF40BQ6NWY9 871 aaKnown RBP12.5□□□□□ -0.41
LINC00173-203ENST00000480237 SP8Q8IXZ3 490 aa12.5□□□□□ -0.41
LINC00173-203ENST00000480237 TBC1D2Q9BYX2 928 aa12.5□□□□□ -0.41
LINC00173-203ENST00000480237 WWC3Q9ULE0 1092 aa12.5□□□□□ -0.41
LINC00173-203ENST00000480237 ATP6V0A2Q9Y487 856 aa12.5□□□□□ -0.41
LINC00173-203ENST00000480237 PDS5AQ29RF7 1337 aaKnown RBP12.49□□□□□ -0.41
LINC00173-203ENST00000480237 IRS2Q9Y4H2 1338 aa12.49□□□□□ -0.41
LINC00173-203ENST00000480237 ST18O60284 1047 aa12.49□□□□□ -0.41
LINC00173-203ENST00000480237 MFSD10Q14728 455 aa12.49□□□□□ -0.41
LINC00173-203ENST00000480237 RNF20Q5VTR2 975 aa12.49□□□□□ -0.41
LINC00173-203ENST00000480237 PLPP6Q8IY26 295 aa12.49□□□□□ -0.41
LINC00173-203ENST00000480237 MAGEB6Q8N7X4 407 aa12.49□□□□□ -0.41
LINC00173-203ENST00000480237 MAP4K1Q92918 833 aa12.49□□□□□ -0.41
LINC00173-203ENST00000480237 GPR101Q96P66 508 aaPredicted RBP12.49□□□□□ -0.41
LINC00173-203ENST00000480237 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
LINC00173-203ENST00000480237 LRP2BPQ9P2M1 347 aa12.49□□□□□ -0.41
LINC00173-203ENST00000480237 ABCF2Q9UG63 623 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms