RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 TTLL5Q6EMB2 1281 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 NBPF10Q6P3W6 841 aaKnown RBP10.08□□□□□ -0.8
PKP4-210ENST00000480171 TTLL7Q6ZT98 887 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 NBPF15Q8N660 670 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 FBXO18Q8NFZ0 1043 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 OSBP2Q969R2 916 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 ERO1AQ96HE7 468 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 ZNF594Q96JF6 807 aaPredicted RBP10.08□□□□□ -0.8
PKP4-210ENST00000480171 A0A0G2JLW4 131 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 PPFIA3O75145 1194 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 TUBB4AP04350 444 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 ATF3P18847 181 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 NLRP12P59046 1061 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 MYSM1Q5VVJ2 828 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 WDR19Q8NEZ3 1342 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 TRMT1Q9NXH9 659 aaKnown RBP10.08□□□□□ -0.8
PKP4-210ENST00000480171 CLIC4Q9Y696 253 aa10.08□□□□□ -0.8
PKP4-210ENST00000480171 PKD1L3Q7Z443 1732 aa10.07□□□□□ -0.8
PKP4-210ENST00000480171 USP27XA6NNY8 438 aa10.07□□□□□ -0.8
PKP4-210ENST00000480171 ZNF213O14771 459 aa10.07□□□□□ -0.8
PKP4-210ENST00000480171 POLR3DP05423 398 aaPredicted RBP10.07□□□□□ -0.8
PKP4-210ENST00000480171 HAND2P61296 217 aa10.07□□□□□ -0.8
PKP4-210ENST00000480171 ZNF397Q8NF99 534 aaPredicted RBP10.07□□□□□ -0.8
PKP4-210ENST00000480171 APPBP2Q92624 585 aa10.07□□□□□ -0.8
PKP4-210ENST00000480171 ZBTB3Q9H5J0 574 aa10.07□□□□□ -0.8
PKP4-210ENST00000480171 A0A087WWV3 80 aa10.07□□□□□ -0.8
PKP4-210ENST00000480171 KIF20AO95235 890 aa10.07□□□□□ -0.8
PKP4-210ENST00000480171 SLU7O95391 586 aaKnown RBP10.07□□□□□ -0.8
PKP4-210ENST00000480171 SFPQP23246 707 aaKnown RBP eCLIP10.07□□□□□ -0.8
PKP4-210ENST00000480171 TRDNQ13061 729 aa10.07□□□□□ -0.8
PKP4-210ENST00000480171 ANO1Q5XXA6 986 aa10.07□□□□□ -0.8
PKP4-210ENST00000480171 CPLX2Q6PUV4 134 aaKnown RBP10.07□□□□□ -0.8
PKP4-210ENST00000480171 ERCC4Q92889 916 aaPredicted RBP10.07□□□□□ -0.8
PKP4-210ENST00000480171 ABCC12Q96J65 1359 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 CCP110O43303 1012 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 CDKL5O76039 1030 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 ZNF202O95125 648 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 FGAP02671 866 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 CMA1P23946 247 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 CHRNA2Q15822 529 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 DPCR1Q3MIW9 517 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 OTUD7BQ6GQQ9 843 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 TMC6Q7Z403 805 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 MB21D2Q8IYB1 491 aaPredicted RBP10.06□□□□□ -0.8
PKP4-210ENST00000480171 JMYQ8N9B5 988 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 XAGE2Q96GT9 111 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 XPO4Q9C0E2 1151 aaKnown RBP10.06□□□□□ -0.8
PKP4-210ENST00000480171 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.06□□□□□ -0.86e-8■■■□□ 18.1
PKP4-210ENST00000480171 IFNKQ9P0W0 207 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 COL18A1P39060 1754 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 PSDA5PKW4 1024 aaPredicted RBP10.06□□□□□ -0.8
PKP4-210ENST00000480171 ERVV-2B6SEH9 535 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 A1BGP04217 495 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 KCNJ6P48051 423 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 HSPA2P54652 639 aa10.06□□□□□ -0.8
PKP4-210ENST00000480171 PUS3Q9BZE2 481 aaKnown RBP10.06□□□□□ -0.8
PKP4-210ENST00000480171 GPHNQ9NQX3 736 aaPredicted RBP10.06□□□□□ -0.8
PKP4-210ENST00000480171 DDX41Q9UJV9 622 aaKnown RBP10.06□□□□□ -0.8
PKP4-210ENST00000480171 ZNF215Q9UL58 517 aaPredicted RBP10.06□□□□□ -0.8
PKP4-210ENST00000480171 PCDH11XQ9BZA7 1347 aa10.05□□□□□ -0.8
PKP4-210ENST00000480171 PCDH11YQ9BZA8 1340 aa10.05□□□□□ -0.8
PKP4-210ENST00000480171 CBFA2T2O43439 604 aa10.05□□□□□ -0.8
PKP4-210ENST00000480171 GTF2E1P29083 439 aaPredicted RBP10.05□□□□□ -0.8
PKP4-210ENST00000480171 KIF23Q02241 960 aaPredicted RBP10.05□□□□□ -0.8
PKP4-210ENST00000480171 GABPB1Q06547 395 aaPredicted RBP10.05□□□□□ -0.8
PKP4-210ENST00000480171 GNL2Q13823 731 aaKnown RBP10.05□□□□□ -0.8
PKP4-210ENST00000480171 NBPF11Q86T75 865 aa10.05□□□□□ -0.8
PKP4-210ENST00000480171 SGSM3Q96HU1 749 aa10.05□□□□□ -0.8
PKP4-210ENST00000480171 TIGD1Q96MW7 591 aa10.05□□□□□ -0.8
PKP4-210ENST00000480171 PARP4Q9UKK3 1724 aaKnown RBP10.05□□□□□ -0.8
PKP4-210ENST00000480171 NUP188Q5SRE5 1749 aa10.05□□□□□ -0.8
PKP4-210ENST00000480171 IKBKBO14920 756 aa10.05□□□□□ -0.8
PKP4-210ENST00000480171 NAA30Q147X3 362 aaPredicted RBP10.05□□□□□ -0.8
PKP4-210ENST00000480171 ZHX1Q9UKY1 873 aaPredicted RBP10.05□□□□□ -0.8
PKP4-210ENST00000480171 HPS5Q9UPZ3 1129 aa10.05□□□□□ -0.8
PKP4-210ENST00000480171 MORC2Q9Y6X9 1032 aaPredicted RBP10.05□□□□□ -0.8
PKP4-210ENST00000480171 TJP1Q07157 1748 aa10.05□□□□□ -0.8
PKP4-210ENST00000480171 BIN1O00499 593 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 PFKFB1P16118 471 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 SLC39A14Q15043 492 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 PPP4R3CPQ6ZMV5 832 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 ZCRB1Q8TBF4 217 aaKnown RBP10.04□□□□□ -0.8
PKP4-210ENST00000480171 CABLES1Q8TDN4 633 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 GPAA1O43292 621 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 ADORA1P30542 326 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 ZAP70P43403 619 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 SYKP43405 635 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 IFNLR1Q8IU57 520 aaPredicted RBP10.04□□□□□ -0.8
PKP4-210ENST00000480171 GLI3P10071 1580 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 CPDO75976 1380 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 ADAMTSL3P82987 1691 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 ZMYM6O95789 1325 aa10.04□□□□□ -0.8
PKP4-210ENST00000480171 ANTXR2P58335 489 aa10.03□□□□□ -0.8
PKP4-210ENST00000480171 FAM193AP78312 1265 aa10.03□□□□□ -0.8
PKP4-210ENST00000480171 FANCCQ00597 558 aa10.03□□□□□ -0.8
PKP4-210ENST00000480171 IFIT5Q13325 482 aaKnown RBP10.03□□□□□ -0.8
PKP4-210ENST00000480171 TCIRG1Q13488 830 aa10.03□□□□□ -0.8
PKP4-210ENST00000480171 TRIM29Q14134 588 aa10.03□□□□□ -0.8
PKP4-210ENST00000480171 ALG1Q9BT22 464 aa10.03□□□□□ -0.8
PKP4-210ENST00000480171 ISCA1Q9BUE6 129 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms