RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 MANSC4A6NHS7 340 aaPredicted RBP8.36□□□□□ -1.07
FN1-220ENST00000480024 GPR25O00155 361 aa8.36□□□□□ -1.07
FN1-220ENST00000480024 IFIT1P09914 478 aaKnown RBP8.36□□□□□ -1.07
FN1-220ENST00000480024 UBTFL1P0CB47 393 aaPredicted RBP8.36□□□□□ -1.07
FN1-220ENST00000480024 ZBTB48P10074 688 aaPredicted RBP8.36□□□□□ -1.07
FN1-220ENST00000480024 RGS19P49795 217 aa8.36□□□□□ -1.07
FN1-220ENST00000480024 CACNB3P54284 484 aa8.36□□□□□ -1.07
FN1-220ENST00000480024 FBXO33Q7Z6M2 555 aa8.36□□□□□ -1.07
FN1-220ENST00000480024 TBC1D22AQ8WUA7 517 aa8.36□□□□□ -1.07
FN1-220ENST00000480024 TMEM39BQ9GZU3 492 aa8.36□□□□□ -1.07
FN1-220ENST00000480024 SIL1Q9H173 461 aa8.36□□□□□ -1.07
FN1-220ENST00000480024 R3HDMLQ9H3Y0 253 aa8.36□□□□□ -1.07
FN1-220ENST00000480024 ELP3Q9H9T3 547 aa8.36□□□□□ -1.07
FN1-220ENST00000480024 HPS5Q9UPZ3 1129 aa8.36□□□□□ -1.07
FN1-220ENST00000480024 KIF16BQ96L93 1317 aa8.35□□□□□ -1.07
FN1-220ENST00000480024 EYA2O00167 538 aa8.35□□□□□ -1.07
FN1-220ENST00000480024 IGF2BP3O00425 579 aaKnown RBP eCLIP8.35□□□□□ -1.071e-13■■□□□ 12.3
FN1-220ENST00000480024 FKTNO75072 461 aa8.35□□□□□ -1.07
FN1-220ENST00000480024 USP2O75604 605 aaPredicted RBP8.35□□□□□ -1.07
FN1-220ENST00000480024 SLC5A1P13866 664 aa8.35□□□□□ -1.07
FN1-220ENST00000480024 FGFR2P21802 821 aa8.35□□□□□ -1.07
FN1-220ENST00000480024 GJA5P36382 358 aa8.35□□□□□ -1.07
FN1-220ENST00000480024 RFX5P48382 616 aaPredicted RBP8.35□□□□□ -1.07
FN1-220ENST00000480024 TNNI2P48788 182 aa8.35□□□□□ -1.07
FN1-220ENST00000480024 IFNL1Q8IU54 200 aa8.35□□□□□ -1.07
FN1-220ENST00000480024 ANKRD13AQ8IZ07 590 aa8.35□□□□□ -1.07
FN1-220ENST00000480024 TEKT1Q969V4 418 aa8.35□□□□□ -1.07
FN1-220ENST00000480024 TEPSINQ96N21 525 aa8.35□□□□□ -1.07
FN1-220ENST00000480024 NOB1Q9ULX3 412 aaKnown RBP8.35□□□□□ -1.07
FN1-220ENST00000480024 AK9Q5TCS8 1911 aa8.35□□□□□ -1.07
FN1-220ENST00000480024 HTTP42858 3142 aa8.34□□□□□ -1.07
FN1-220ENST00000480024 MAST3O60307 1309 aa8.34□□□□□ -1.07
FN1-220ENST00000480024 UNCXA6NJT0 531 aa8.34□□□□□ -1.07
FN1-220ENST00000480024 ALDH1A1P00352 501 aa8.34□□□□□ -1.07
FN1-220ENST00000480024 PKN2Q16513 984 aaKnown RBP8.34□□□□□ -1.07
FN1-220ENST00000480024 ATP2B3Q16720 1220 aa8.34□□□□□ -1.07
FN1-220ENST00000480024 ATG9AQ7Z3C6 839 aa8.34□□□□□ -1.07
FN1-220ENST00000480024 TRMT2AQ8IZ69 625 aaKnown RBP8.34□□□□□ -1.07
FN1-220ENST00000480024 CNKSR2Q8WXI2 1034 aa8.34□□□□□ -1.07
FN1-220ENST00000480024 OPTNQ96CV9 577 aa8.34□□□□□ -1.07
FN1-220ENST00000480024 CFHR5Q9BXR6 569 aa8.34□□□□□ -1.07
FN1-220ENST00000480024 API5Q9BZZ5 524 aaKnown RBP8.34□□□□□ -1.07
FN1-220ENST00000480024 TMOD2Q9NZR1 351 aa8.34□□□□□ -1.07
FN1-220ENST00000480024 LRRFIP2Q9Y608 721 aaKnown RBP8.34□□□□□ -1.07
FN1-220ENST00000480024 CCER2I3L3R5 266 aa8.33□□□□□ -1.08
FN1-220ENST00000480024 CT47B1P0C2W7 299 aaPredicted RBP8.33□□□□□ -1.08
FN1-220ENST00000480024 INHBEP58166 350 aa8.33□□□□□ -1.08
FN1-220ENST00000480024 HDLBPQ00341 1268 aaKnown RBP8.33□□□□□ -1.08
FN1-220ENST00000480024 VGLL4Q14135 290 aa8.33□□□□□ -1.08
FN1-220ENST00000480024 NOM1Q5C9Z4 860 aaKnown RBP8.33□□□□□ -1.08
FN1-220ENST00000480024 LPIN2Q92539 896 aa8.33□□□□□ -1.08
FN1-220ENST00000480024 OTUD5Q96G74 571 aa8.33□□□□□ -1.08
FN1-220ENST00000480024 ZDHHC15Q96MV8 337 aa8.33□□□□□ -1.08
FN1-220ENST00000480024 MEIS3Q99687 375 aa8.33□□□□□ -1.08
FN1-220ENST00000480024 PA2G4Q9UQ80 394 aaKnown RBP8.33□□□□□ -1.08
FN1-220ENST00000480024 RPAP1Q9BWH6 1393 aaPredicted RBP8.33□□□□□ -1.08
FN1-220ENST00000480024 MYH2Q9UKX2 1941 aa8.33□□□□□ -1.08
FN1-220ENST00000480024 DOCK2Q92608 1830 aa8.32□□□□□ -1.08
FN1-220ENST00000480024 KIAA0100Q14667 2235 aaKnown RBP8.32□□□□□ -1.08
FN1-220ENST00000480024 CIAO1O76071 339 aa8.32□□□□□ -1.08
FN1-220ENST00000480024 PRDX5P30044 214 aa8.32□□□□□ -1.08
FN1-220ENST00000480024 RARSP54136 660 aaKnown RBP8.32□□□□□ -1.08
FN1-220ENST00000480024 CRHR2Q13324 411 aa8.32□□□□□ -1.08
FN1-220ENST00000480024 DIXDC1Q155Q3 683 aa8.32□□□□□ -1.08
FN1-220ENST00000480024 OTUD7BQ6GQQ9 843 aa8.32□□□□□ -1.08
FN1-220ENST00000480024 APOBEC3HQ6NTF7 200 aaKnown RBP8.32□□□□□ -1.08
FN1-220ENST00000480024 FBXO46Q6PJ61 603 aaPredicted RBP8.32□□□□□ -1.08
FN1-220ENST00000480024 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.32□□□□□ -1.08
FN1-220ENST00000480024 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.32□□□□□ -1.08
FN1-220ENST00000480024 WDR66Q8TBY9 1149 aa8.32□□□□□ -1.08
FN1-220ENST00000480024 WRNIP1Q96S55 665 aa8.32□□□□□ -1.08
FN1-220ENST00000480024 CEP126Q9P2H0 1117 aa8.32□□□□□ -1.08
FN1-220ENST00000480024 SUGT1Q9Y2Z0 365 aa8.32□□□□□ -1.08
FN1-220ENST00000480024 TRIM17Q9Y577 477 aa8.32□□□□□ -1.08
FN1-220ENST00000480024 CSADQ9Y600 493 aa8.32□□□□□ -1.08
FN1-220ENST00000480024 ZSWIM8A7E2V4 1837 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 CCL15-CCL14A0A0B4J2E2 113 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 ADORA1P30542 326 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 IL15P40933 162 aaPredicted RBP8.31□□□□□ -1.08
FN1-220ENST00000480024 PHKA1P46020 1223 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 MAP3K9P80192 1104 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 CCL15Q16663 113 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 HHIPL2Q6UWX4 724 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 OTOP1Q7RTM1 612 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 FAM83AQ86UY5 434 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 CD99L2Q8TCZ2 262 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 BRI3BPQ8WY22 251 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 ZKSCAN4Q969J2 545 aaPredicted RBP8.31□□□□□ -1.08
FN1-220ENST00000480024 PTPN18Q99952 460 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 GNL3LQ9NVN8 582 aaKnown RBP8.31□□□□□ -1.08
FN1-220ENST00000480024 FBXO3Q9UK99 471 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 HDAC5Q9UQL6 1122 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 DAGLAQ9Y4D2 1042 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 SNCAIPQ9Y6H5 919 aa8.31□□□□□ -1.08
FN1-220ENST00000480024 TESPA1A2RU30 521 aaPredicted RBP8.3□□□□□ -1.08
FN1-220ENST00000480024 SPDYE5A6NIY4 337 aa8.3□□□□□ -1.08
FN1-220ENST00000480024 LDHBP07195 334 aaKnown RBP8.3□□□□□ -1.08
FN1-220ENST00000480024 GTF2A2P52657 109 aa8.3□□□□□ -1.08
FN1-220ENST00000480024 TCP10Q12799 353 aa8.3□□□□□ -1.08
FN1-220ENST00000480024 NFIAQ12857 509 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms