RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 UBE3CQ15386 1083 aa15.18■□□□□ 0.02
TRAPPC12-218ENST00000479897 RILPL2Q969X0 211 aa15.18■□□□□ 0.02
TRAPPC12-218ENST00000479897 NSUN4Q96CB9 384 aaKnown RBP15.18■□□□□ 0.02
TRAPPC12-218ENST00000479897 LRP2BPQ9P2M1 347 aa15.18■□□□□ 0.02
TRAPPC12-218ENST00000479897 WDR90Q96KV7 1748 aa15.17■□□□□ 0.02
TRAPPC12-218ENST00000479897 IDH1O75874 414 aaKnown RBP15.17■□□□□ 0.02
TRAPPC12-218ENST00000479897 PDE6AP16499 860 aa15.17■□□□□ 0.02
TRAPPC12-218ENST00000479897 ADD2P35612 726 aa15.17■□□□□ 0.02
TRAPPC12-218ENST00000479897 HDLBPQ00341 1268 aaKnown RBP15.17■□□□□ 0.02
TRAPPC12-218ENST00000479897 GPC2Q8N158 579 aa15.17■□□□□ 0.02
TRAPPC12-218ENST00000479897 ZNF384Q8TF68 577 aa15.17■□□□□ 0.02
TRAPPC12-218ENST00000479897 DPF2Q92785 391 aa15.17■□□□□ 0.02
TRAPPC12-218ENST00000479897 FBXW7Q969H0 707 aa15.17■□□□□ 0.02
TRAPPC12-218ENST00000479897 MRIQ9BWK5 157 aa15.17■□□□□ 0.02
TRAPPC12-218ENST00000479897 SCN4AP35499 1836 aa15.17■□□□□ 0.02
TRAPPC12-218ENST00000479897 GAKO14976 1311 aa15.17■□□□□ 0.02
TRAPPC12-218ENST00000479897 CDK5RAP2Q96SN8 1893 aa15.16■□□□□ 0.02
TRAPPC12-218ENST00000479897 FOCADQ5VW36 1801 aa15.16■□□□□ 0.02
TRAPPC12-218ENST00000479897 TCRBV5S4A2TA0A5A2 114 aa15.16■□□□□ 0.02
TRAPPC12-218ENST00000479897 RNF113AO15541 343 aaKnown RBP15.16■□□□□ 0.02
TRAPPC12-218ENST00000479897 CDC45O75419 566 aa15.16■□□□□ 0.02
TRAPPC12-218ENST00000479897 MECOMQ03112 1051 aa15.16■□□□□ 0.02
TRAPPC12-218ENST00000479897 GRIK5Q16478 980 aa15.16■□□□□ 0.02
TRAPPC12-218ENST00000479897 DZIP1Q86YF9 867 aaKnown RBP15.16■□□□□ 0.02
TRAPPC12-218ENST00000479897 RAI14Q9P0K7 980 aa15.16■□□□□ 0.02
TRAPPC12-218ENST00000479897 RAD50Q92878 1312 aa15.16■□□□□ 0.02
TRAPPC12-218ENST00000479897 CHMLP26374 656 aa15.15■□□□□ 0.02
TRAPPC12-218ENST00000479897 GSTO1P78417 241 aa15.15■□□□□ 0.02
TRAPPC12-218ENST00000479897 ZMYM1Q5SVZ6 1142 aa15.15■□□□□ 0.02
TRAPPC12-218ENST00000479897 SLC9C2Q5TAH2 1124 aa15.15■□□□□ 0.02
TRAPPC12-218ENST00000479897 SLF2Q8IX21 1173 aa15.15■□□□□ 0.02
TRAPPC12-218ENST00000479897 APPBP2Q92624 585 aa15.15■□□□□ 0.02
TRAPPC12-218ENST00000479897 FAM163AQ96GL9 167 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC12-218ENST00000479897 MXD3Q9BW11 206 aa15.15■□□□□ 0.02
TRAPPC12-218ENST00000479897 MROH7-TTC4A0A0A0MT08 1334 aa15.15■□□□□ 0.02
TRAPPC12-218ENST00000479897 ZNF532Q9HCE3 1301 aa15.15■□□□□ 0.02
TRAPPC12-218ENST00000479897 LDHCP07864 332 aa15.14■□□□□ 0.01
TRAPPC12-218ENST00000479897 NAA16Q6N069 864 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC12-218ENST00000479897 HHIPL2Q6UWX4 724 aa15.14■□□□□ 0.01
TRAPPC12-218ENST00000479897 MAGEB6Q8N7X4 407 aa15.14■□□□□ 0.01
TRAPPC12-218ENST00000479897 L3MBTL3Q96JM7 780 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC12-218ENST00000479897 DIAPH3Q9NSV4 1193 aa15.14■□□□□ 0.01
TRAPPC12-218ENST00000479897 SERPINA10Q9UK55 444 aa15.14■□□□□ 0.01
TRAPPC12-218ENST00000479897 TTF2Q9UNY4 1162 aaKnown RBP15.14■□□□□ 0.01
TRAPPC12-218ENST00000479897 ZNF280AP59817 542 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC12-218ENST00000479897 DDX60LQ5H9U9 1706 aaKnown RBP15.13■□□□□ 0.01
TRAPPC12-218ENST00000479897 CERS3Q8IU89 383 aa15.13■□□□□ 0.01
TRAPPC12-218ENST00000479897 KIAA0825Q8IV33 1275 aa15.13■□□□□ 0.01
TRAPPC12-218ENST00000479897 MTMR14Q8NCE2 650 aa15.13■□□□□ 0.01
TRAPPC12-218ENST00000479897 HELLSQ9NRZ9 838 aa15.13■□□□□ 0.01
TRAPPC12-218ENST00000479897 A0A0D9SFI3 127 aa15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 USP17L8P0C7I0 530 aa15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 CYP7A1P22680 504 aa15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 GMPSP49915 693 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 SCNN1DP51172 638 aa15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 NMIQ13287 307 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 DIXDC1Q155Q3 683 aa15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 DPY19L2Q6NUT2 758 aa15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 CASC1Q6TDU7 716 aa15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 ADGRA1Q86SQ6 560 aa15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 RUFY2Q8WXA3 655 aa15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 TEKT1Q969V4 418 aa15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 HDAC9Q9UKV0 1011 aa15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 ZBTB12Q9Y330 459 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 DAGLAQ9Y4D2 1042 aa15.12■□□□□ 0.01
TRAPPC12-218ENST00000479897 GPR75-ASB3A0A0A6YYF3 556 aa15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 GLTPD2A6NH11 291 aa15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 CHGBP05060 677 aa15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 CRKP46108 304 aa15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 PPP4CP60510 307 aa15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 OGFOD1Q8N543 542 aa15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 OSBP2Q969R2 916 aa15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 ZBED3Q96IU2 234 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 FAM227BQ96M60 508 aa15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 ZDHHC15Q96MV8 337 aa15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 RIOK1Q9BRS2 568 aaKnown RBP15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 GPRC5DQ9NZD1 345 aa15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 GJA3Q9Y6H8 435 aa15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 NAV1Q8NEY1 1877 aa15.11■□□□□ 0.01
TRAPPC12-218ENST00000479897 F8W031 263 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC12-218ENST00000479897 SGSM2O43147 1006 aa15.1■□□□□ 0.01
TRAPPC12-218ENST00000479897 DDNO94850 711 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC12-218ENST00000479897 C8orf34Q49A92 452 aa15.1■□□□□ 0.01
TRAPPC12-218ENST00000479897 MCMDC2Q4G0Z9 681 aa15.1■□□□□ 0.01
TRAPPC12-218ENST00000479897 ESYT1Q9BSJ8 1104 aa15.1■□□□□ 0.01
TRAPPC12-218ENST00000479897 PUS7LQ9H0K6 701 aaKnown RBP15.1■□□□□ 0.01
TRAPPC12-218ENST00000479897 LAMA4Q16363 1823 aa15.09■□□□□ 0.01
TRAPPC12-218ENST00000479897 M0R2C6 588 aa15.09■□□□□ 0.01
TRAPPC12-218ENST00000479897 BAG3O95817 575 aa15.09■□□□□ 0.01
TRAPPC12-218ENST00000479897 MFAP1P55081 439 aaKnown RBP15.09■□□□□ 0.01
TRAPPC12-218ENST00000479897 SLFNL1Q499Z3 407 aa15.09■□□□□ 0.01
TRAPPC12-218ENST00000479897 CWC27Q6UX04 472 aaKnown RBP15.09■□□□□ 0.01
TRAPPC12-218ENST00000479897 MICALL2Q8IY33 904 aa15.09■□□□□ 0.01
TRAPPC12-218ENST00000479897 CCDC171Q6TFL3 1326 aa15.09■□□□□ 0.01
TRAPPC12-218ENST00000479897 LAMB1P07942 1786 aa15.08■□□□□ 0.01
TRAPPC12-218ENST00000479897 MAGEB6P1A0A0J9YX57 407 aa15.08■□□□□ 0
TRAPPC12-218ENST00000479897 SPDYE2BA6NHP3 402 aa15.08■□□□□ 0
TRAPPC12-218ENST00000479897 GPAA1O43292 621 aa15.08■□□□□ 0
TRAPPC12-218ENST00000479897 EIF5BO60841 1220 aaKnown RBP15.08■□□□□ 0
TRAPPC12-218ENST00000479897 SPDYE6P0CI01 402 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms