RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 TUBB4AP04350 444 aa23.9■■□□□ 1.42
COL13A1-208ENST00000479733 CASQ1P31415 396 aa23.9■■□□□ 1.42
COL13A1-208ENST00000479733 CC2D1AQ6P1N0 951 aaPredicted RBP23.9■■□□□ 1.42
COL13A1-208ENST00000479733 MAST3O60307 1309 aa23.9■■□□□ 1.42
COL13A1-208ENST00000479733 MYL5Q02045 173 aa23.9■■□□□ 1.42
COL13A1-208ENST00000479733 PSME1Q06323 249 aa23.9■■□□□ 1.42
COL13A1-208ENST00000479733 HELLSQ9NRZ9 838 aa23.9■■□□□ 1.42
COL13A1-208ENST00000479733 HEG1Q9ULI3 1381 aa23.89■■□□□ 1.42
COL13A1-208ENST00000479733 SRRTQ9BXP5 876 aaKnown RBP23.89■■□□□ 1.42
COL13A1-208ENST00000479733 TBX22Q9Y458 520 aa23.89■■□□□ 1.42
COL13A1-208ENST00000479733 M0R2C6 588 aa23.89■■□□□ 1.41
COL13A1-208ENST00000479733 CMA1P23946 247 aa23.89■■□□□ 1.41
COL13A1-208ENST00000479733 CCDC158Q5M9N0 1113 aa23.89■■□□□ 1.41
COL13A1-208ENST00000479733 ZNF790Q6PG37 636 aa23.89■■□□□ 1.41
COL13A1-208ENST00000479733 CLIC6Q96NY7 704 aa23.89■■□□□ 1.41
COL13A1-208ENST00000479733 IKBKBO14920 756 aa23.88■■□□□ 1.41
COL13A1-208ENST00000479733 ZSCAN12O43309 604 aa23.88■■□□□ 1.41
COL13A1-208ENST00000479733 ADKP55263 362 aaKnown RBP23.88■■□□□ 1.41
COL13A1-208ENST00000479733 FKBP4Q02790 459 aaKnown RBP eCLIP23.88■■□□□ 1.41
COL13A1-208ENST00000479733 ZMYM1Q5SVZ6 1142 aa23.88■■□□□ 1.41
COL13A1-208ENST00000479733 ANKARQ7Z5J8 1434 aa23.88■■□□□ 1.41
COL13A1-208ENST00000479733 PPP2R3AQ06190 1150 aa23.88■■□□□ 1.41
COL13A1-208ENST00000479733 KARSQ15046 597 aaKnown RBP23.87■■□□□ 1.41
COL13A1-208ENST00000479733 WASHC4Q2M389 1173 aa23.87■■□□□ 1.41
COL13A1-208ENST00000479733 VSTM4Q8IW00 320 aa23.87■■□□□ 1.41
COL13A1-208ENST00000479733 DESI2Q9BSY9 194 aa23.87■■□□□ 1.41
COL13A1-208ENST00000479733 UBR1Q8IWV7 1749 aa23.87■■□□□ 1.41
COL13A1-208ENST00000479733 CBFA2T2O43439 604 aa23.87■■□□□ 1.41
COL13A1-208ENST00000479733 PRC1O43663 620 aa23.87■■□□□ 1.41
COL13A1-208ENST00000479733 RXRAP19793 462 aa23.87■■□□□ 1.41
COL13A1-208ENST00000479733 TOGARAM2Q6ZUX3 1019 aa23.87■■□□□ 1.41
COL13A1-208ENST00000479733 NFATC2IPQ8NCF5 419 aa23.87■■□□□ 1.41
COL13A1-208ENST00000479733 PARD6BQ9BYG5 372 aa23.87■■□□□ 1.41
COL13A1-208ENST00000479733 SLIT1O75093 1534 aa23.87■■□□□ 1.41
COL13A1-208ENST00000479733 ARFGAP3Q9NP61 516 aa23.87■■□□□ 1.41
COL13A1-208ENST00000479733 FEZ2Q9UHY8 353 aaPredicted RBP23.87■■□□□ 1.41
COL13A1-208ENST00000479733 IFIT1P09914 478 aaKnown RBP23.86■■□□□ 1.41
COL13A1-208ENST00000479733 KIF23Q02241 960 aaPredicted RBP23.86■■□□□ 1.41
COL13A1-208ENST00000479733 OSBP2Q969R2 916 aa23.86■■□□□ 1.41
COL13A1-208ENST00000479733 SPECC1Q5M775 1068 aa23.86■■□□□ 1.41
COL13A1-208ENST00000479733 TXLNBQ8N3L3 684 aa23.86■■□□□ 1.41
COL13A1-208ENST00000479733 ANKRD24Q8TF21 1146 aa23.86■■□□□ 1.41
COL13A1-208ENST00000479733 BAG1Q99933 345 aaPredicted RBP23.86■■□□□ 1.41
COL13A1-208ENST00000479733 DHX8Q14562 1220 aaKnown RBP23.85■■□□□ 1.41
COL13A1-208ENST00000479733 OLFM4Q6UX06 510 aa23.85■■□□□ 1.41
COL13A1-208ENST00000479733 BRAPQ7Z569 592 aa23.85■■□□□ 1.41
COL13A1-208ENST00000479733 STK11IPQ8N1F8 1099 aa23.85■■□□□ 1.41
COL13A1-208ENST00000479733 IRX2Q9BZI1 471 aaPredicted RBP23.85■■□□□ 1.41
COL13A1-208ENST00000479733 HPS5Q9UPZ3 1129 aa23.85■■□□□ 1.41
COL13A1-208ENST00000479733 MYH15Q9Y2K3 1946 aa23.85■■□□□ 1.41
COL13A1-208ENST00000479733 TPM1P09493 284 aa23.85■■□□□ 1.41
COL13A1-208ENST00000479733 ESCO1Q5FWF5 840 aa23.85■■□□□ 1.41
COL13A1-208ENST00000479733 ZNF496Q96IT1 587 aaPredicted RBP23.85■■□□□ 1.41
COL13A1-208ENST00000479733 ZNF594Q96JF6 807 aaPredicted RBP23.85■■□□□ 1.41
COL13A1-208ENST00000479733 RNF113AO15541 343 aaKnown RBP23.84■■□□□ 1.41
COL13A1-208ENST00000479733 SHC4Q6S5L8 630 aa23.84■■□□□ 1.41
COL13A1-208ENST00000479733 INTS13Q9NVM9 706 aa23.84■■□□□ 1.41
COL13A1-208ENST00000479733 FOXN1O15353 648 aa23.84■■□□□ 1.41
COL13A1-208ENST00000479733 ARHGAP6O43182 974 aa23.84■■□□□ 1.41
COL13A1-208ENST00000479733 LMAN1P49257 510 aa23.84■■□□□ 1.41
COL13A1-208ENST00000479733 PDE4BQ07343 736 aa23.84■■□□□ 1.41
COL13A1-208ENST00000479733 GPS2Q13227 327 aa23.84■■□□□ 1.41
COL13A1-208ENST00000479733 DHX58Q96C10 678 aa23.84■■□□□ 1.41
COL13A1-208ENST00000479733 CDC27P30260 824 aa23.83■■□□□ 1.41
COL13A1-208ENST00000479733 ZSCAN26Q16670 478 aa23.83■■□□□ 1.41
COL13A1-208ENST00000479733 TMEM139Q8IV31 216 aa23.83■■□□□ 1.41
COL13A1-208ENST00000479733 GPR161Q8N6U8 529 aaKnown RBP23.83■■□□□ 1.41
COL13A1-208ENST00000479733 ABCC6O95255 1503 aa23.83■■□□□ 1.41
COL13A1-208ENST00000479733 RFX7Q2KHR2 1363 aa23.83■■□□□ 1.41
COL13A1-208ENST00000479733 DHX16O60231 1041 aaKnown RBP23.83■■□□□ 1.41
COL13A1-208ENST00000479733 MAP3K9P80192 1104 aa23.83■■□□□ 1.41
COL13A1-208ENST00000479733 SLC39A14Q15043 492 aa23.83■■□□□ 1.41
COL13A1-208ENST00000479733 LONRF3Q496Y0 759 aa23.83■■□□□ 1.41
COL13A1-208ENST00000479733 FOXP4Q8IVH2 680 aaPredicted RBP23.83■■□□□ 1.41
COL13A1-208ENST00000479733 CCDC191Q8NCU4 936 aa23.83■■□□□ 1.41
COL13A1-208ENST00000479733 LAMA4Q16363 1823 aa23.83■■□□□ 1.4
COL13A1-208ENST00000479733 MPHOSPH8Q99549 860 aa23.83■■□□□ 1.4
COL13A1-208ENST00000479733 PCDHA5Q9Y5H7 936 aa23.83■■□□□ 1.4
COL13A1-208ENST00000479733 RABL6Q3YEC7 729 aaPredicted RBP23.82■■□□□ 1.4
COL13A1-208ENST00000479733 LRRC24Q50LG9 513 aa23.82■■□□□ 1.4
COL13A1-208ENST00000479733 TUBE1Q9UJT0 475 aa23.82■■□□□ 1.4
COL13A1-208ENST00000479733 PALLDQ8WX93 1383 aa23.82■■□□□ 1.4
COL13A1-208ENST00000479733 RGPD2P0DJD1 1756 aa23.82■■□□□ 1.4
COL13A1-208ENST00000479733 CCDC12Q8WUD4 166 aaPredicted RBP23.82■■□□□ 1.4
COL13A1-208ENST00000479733 TRMT44Q8IYL2 757 aaKnown RBP23.81■■□□□ 1.4
COL13A1-208ENST00000479733 CNNM3Q8NE01 707 aa23.81■■□□□ 1.4
COL13A1-208ENST00000479733 UBXN6Q9BZV1 441 aa23.81■■□□□ 1.4
COL13A1-208ENST00000479733 LCMT1Q9UIC8 334 aa23.81■■□□□ 1.4
COL13A1-208ENST00000479733 DENND2AQ9ULE3 1009 aa23.81■■□□□ 1.4
COL13A1-208ENST00000479733 AXIN2Q9Y2T1 843 aa23.81■■□□□ 1.4
COL13A1-208ENST00000479733 MRFAP1Q9Y605 127 aa23.81■■□□□ 1.4
COL13A1-208ENST00000479733 MRC1P22897 1456 aa23.81■■□□□ 1.4
COL13A1-208ENST00000479733 MARF1Q9Y4F3 1742 aaKnown RBP23.81■■□□□ 1.4
COL13A1-208ENST00000479733 TRIM66O15016 1216 aa23.81■■□□□ 1.4
COL13A1-208ENST00000479733 IMMTQ16891 758 aaKnown RBP23.81■■□□□ 1.4
COL13A1-208ENST00000479733 ATG9AQ7Z3C6 839 aa23.81■■□□□ 1.4
COL13A1-208ENST00000479733 C10orf67Q8IYJ2 551 aa23.81■■□□□ 1.4
COL13A1-208ENST00000479733 FUT8Q9BYC5 575 aa23.81■■□□□ 1.4
COL13A1-208ENST00000479733 FGAP02671 866 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 MCM6Q14566 821 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms