RNA–Protein interactions for RNA: ENST00000479424.5

ITSN1-228, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-228ENST00000479424 ZNF521Q96K83 1311 aa10.86□□□□□ -0.67
ITSN1-228ENST00000479424 AK9Q5TCS8 1911 aa10.86□□□□□ -0.67
ITSN1-228ENST00000479424 POTEFA5A3E0 1075 aa10.86□□□□□ -0.67
ITSN1-228ENST00000479424 RBM5P52756 815 aaKnown RBP eCLIP10.86□□□□□ -0.67
ITSN1-228ENST00000479424 LRRC24Q50LG9 513 aa10.86□□□□□ -0.67
ITSN1-228ENST00000479424 SLC4A10Q6U841 1118 aa10.86□□□□□ -0.67
ITSN1-228ENST00000479424 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.86□□□□□ -0.67
ITSN1-228ENST00000479424 ANKRD13AQ8IZ07 590 aa10.86□□□□□ -0.67
ITSN1-228ENST00000479424 ANKRD44Q8N8A2 993 aa10.86□□□□□ -0.67
ITSN1-228ENST00000479424 VGLL2Q8N8G2 317 aa10.86□□□□□ -0.67
ITSN1-228ENST00000479424 SRCIN1Q9C0H9 1055 aa10.86□□□□□ -0.67
ITSN1-228ENST00000479424 BICC1Q9H694 974 aaKnown RBP10.86□□□□□ -0.67
ITSN1-228ENST00000479424 C9orf78Q9NZ63 289 aaPredicted RBP10.86□□□□□ -0.67
ITSN1-228ENST00000479424 CRKP46108 304 aa10.85□□□□□ -0.67
ITSN1-228ENST00000479424 IREB2P48200 963 aaKnown RBP10.85□□□□□ -0.67
ITSN1-228ENST00000479424 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.85□□□□□ -0.67
ITSN1-228ENST00000479424 CD99L2Q8TCZ2 262 aa10.85□□□□□ -0.67
ITSN1-228ENST00000479424 OPTNQ96CV9 577 aa10.85□□□□□ -0.67
ITSN1-228ENST00000479424 TMEM39BQ9GZU3 492 aa10.85□□□□□ -0.67
ITSN1-228ENST00000479424 ELP3Q9H9T3 547 aa10.85□□□□□ -0.67
ITSN1-228ENST00000479424 PTPN22Q9Y2R2 807 aa10.85□□□□□ -0.67
ITSN1-228ENST00000479424 TCP10L2B9ZVM9 353 aa10.84□□□□□ -0.67
ITSN1-228ENST00000479424 ANP32CO43423 234 aa10.84□□□□□ -0.67
ITSN1-228ENST00000479424 VGLL4Q14135 290 aa10.84□□□□□ -0.67
ITSN1-228ENST00000479424 MRPL50Q8N5N7 158 aaKnown RBP10.84□□□□□ -0.67
ITSN1-228ENST00000479424 PCDH10Q9P2E7 1040 aa10.84□□□□□ -0.67
ITSN1-228ENST00000479424 IQSEC3Q9UPP2 1182 aaPredicted RBP10.84□□□□□ -0.67
ITSN1-228ENST00000479424 MROH5Q6ZUA9 1318 aa10.84□□□□□ -0.67
ITSN1-228ENST00000479424 SZT2Q5T011 3432 aa10.83□□□□□ -0.68
ITSN1-228ENST00000479424 TNFAIP1Q13829 316 aa10.83□□□□□ -0.68
ITSN1-228ENST00000479424 KLHDC4Q8TBB5 520 aa10.83□□□□□ -0.68
ITSN1-228ENST00000479424 BRI3BPQ8WY22 251 aa10.83□□□□□ -0.68
ITSN1-228ENST00000479424 ARMC5Q96C12 935 aa10.83□□□□□ -0.68
ITSN1-228ENST00000479424 ERO1AQ96HE7 468 aa10.83□□□□□ -0.68
ITSN1-228ENST00000479424 CEP290O15078 2479 aa10.83□□□□□ -0.68
ITSN1-228ENST00000479424 MYH2Q9UKX2 1941 aa10.82□□□□□ -0.68
ITSN1-228ENST00000479424 PDE8BO95263 885 aa10.82□□□□□ -0.68
ITSN1-228ENST00000479424 FGFR2P21802 821 aa10.82□□□□□ -0.68
ITSN1-228ENST00000479424 BCAMP50895 628 aa10.82□□□□□ -0.68
ITSN1-228ENST00000479424 CACNB3P54284 484 aa10.82□□□□□ -0.68
ITSN1-228ENST00000479424 MAP3K9P80192 1104 aa10.82□□□□□ -0.68
ITSN1-228ENST00000479424 HDLBPQ00341 1268 aaKnown RBP10.82□□□□□ -0.68
ITSN1-228ENST00000479424 SP3Q02447 781 aa10.82□□□□□ -0.68
ITSN1-228ENST00000479424 APOBEC3HQ6NTF7 200 aaKnown RBP10.82□□□□□ -0.68
ITSN1-228ENST00000479424 FAM9BQ8IZU0 186 aa10.82□□□□□ -0.68
ITSN1-228ENST00000479424 FAM43AQ8N2R8 423 aa10.82□□□□□ -0.68
ITSN1-228ENST00000479424 USP44Q9H0E7 712 aa10.82□□□□□ -0.68
ITSN1-228ENST00000479424 MGAMO43451 1857 aa10.81□□□□□ -0.68
ITSN1-228ENST00000479424 RFX5P48382 616 aaPredicted RBP10.81□□□□□ -0.68
ITSN1-228ENST00000479424 CHAF1AQ13111 956 aaPredicted RBP10.81□□□□□ -0.68
ITSN1-228ENST00000479424 METTL24Q5JXM2 366 aa10.81□□□□□ -0.68
ITSN1-228ENST00000479424 INTS3Q68E01 1043 aaKnown RBP10.81□□□□□ -0.68
ITSN1-228ENST00000479424 OTUD7BQ6GQQ9 843 aa10.81□□□□□ -0.68
ITSN1-228ENST00000479424 ZDHHC15Q96MV8 337 aa10.81□□□□□ -0.68
ITSN1-228ENST00000479424 MRIQ9BWK5 157 aa10.81□□□□□ -0.68
ITSN1-228ENST00000479424 EFCC1Q9HA90 598 aa10.81□□□□□ -0.68
ITSN1-228ENST00000479424 SNCAIPQ9Y6H5 919 aa10.81□□□□□ -0.68
ITSN1-228ENST00000479424 RANBP2P49792 3224 aaKnown RBP10.81□□□□□ -0.68
ITSN1-228ENST00000479424 DOCK3Q8IZD9 2030 aa10.8□□□□□ -0.68
ITSN1-228ENST00000479424 PTPRFP10586 1907 aa10.8□□□□□ -0.68
ITSN1-228ENST00000479424 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
ITSN1-228ENST00000479424 EN2P19622 333 aaPredicted RBP10.8□□□□□ -0.68
ITSN1-228ENST00000479424 TBC1D22AQ8WUA7 517 aa10.8□□□□□ -0.68
ITSN1-228ENST00000479424 OTUD5Q96G74 571 aa10.8□□□□□ -0.68
ITSN1-228ENST00000479424 KIF16BQ96L93 1317 aa10.8□□□□□ -0.68
ITSN1-228ENST00000479424 CCL15-CCL14A0A0B4J2E2 113 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 SPDYE5A6NIY4 337 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 IRF6O14896 467 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 TNNI2P48788 182 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 GTF2A2P52657 109 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 CCL15Q16663 113 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 CAVIN4Q5BKX8 364 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 ATG9AQ7Z3C6 839 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 FAM83AQ86UY5 434 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 VPS37DQ86XT2 251 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 SSH1Q8WYL5 1049 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 ZKSCAN4Q969J2 545 aaPredicted RBP10.79□□□□□ -0.68
ITSN1-228ENST00000479424 TEKT1Q969V4 418 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 ZNF333Q96JL9 665 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 PTPRCP08575 1304 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 PHIPQ8WWQ0 1821 aa10.79□□□□□ -0.68
ITSN1-228ENST00000479424 BTBD19C9JJ37 291 aa10.78□□□□□ -0.68
ITSN1-228ENST00000479424 PUM3Q15397 648 aaKnown RBP10.78□□□□□ -0.68
ITSN1-228ENST00000479424 TAF1CQ15572 869 aaPredicted RBP10.78□□□□□ -0.68
ITSN1-228ENST00000479424 FKBP1CQ5VVH2 108 aa10.78□□□□□ -0.68
ITSN1-228ENST00000479424 HHIPL2Q6UWX4 724 aa10.78□□□□□ -0.68
ITSN1-228ENST00000479424 WRNIP1Q96S55 665 aa10.78□□□□□ -0.68
ITSN1-228ENST00000479424 ARHGAP39Q9C0H5 1083 aa10.78□□□□□ -0.68
ITSN1-228ENST00000479424 ZFYVE28Q9HCC9 887 aa10.78□□□□□ -0.68
ITSN1-228ENST00000479424 SUGT1Q9Y2Z0 365 aa10.78□□□□□ -0.68
ITSN1-228ENST00000479424 CSADQ9Y600 493 aa10.78□□□□□ -0.68
ITSN1-228ENST00000479424 PTCH2Q9Y6C5 1203 aa10.78□□□□□ -0.68
ITSN1-228ENST00000479424 DOCK2Q92608 1830 aa10.78□□□□□ -0.68
ITSN1-228ENST00000479424 RPAP1Q9BWH6 1393 aaPredicted RBP10.77□□□□□ -0.68
ITSN1-228ENST00000479424 EYA2O00167 538 aa10.77□□□□□ -0.69
ITSN1-228ENST00000479424 TLR2O60603 784 aa10.77□□□□□ -0.69
ITSN1-228ENST00000479424 FRAT2O75474 233 aaPredicted RBP10.77□□□□□ -0.69
ITSN1-228ENST00000479424 IFIT1P09914 478 aaKnown RBP10.77□□□□□ -0.69
ITSN1-228ENST00000479424 CTGFP29279 349 aa10.77□□□□□ -0.69
ITSN1-228ENST00000479424 INPP5BP32019 993 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms