RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 C2CD2LO14523 706 aa8.66□□□□□ -1.02
HOXB3-209ENST00000478644 TATP17735 454 aaPredicted RBP8.66□□□□□ -1.02
HOXB3-209ENST00000478644 FGFR3P22607 806 aa8.66□□□□□ -1.02
HOXB3-209ENST00000478644 SAMD5Q5TGI4 173 aa8.66□□□□□ -1.02
HOXB3-209ENST00000478644 OGFOD1Q8N543 542 aa8.66□□□□□ -1.02
HOXB3-209ENST00000478644 ZDHHC1Q8WTX9 485 aa8.66□□□□□ -1.02
HOXB3-209ENST00000478644 ABHD17AQ96GS6 310 aa8.66□□□□□ -1.02
HOXB3-209ENST00000478644 GDF2Q9UK05 429 aaPredicted RBP8.66□□□□□ -1.02
HOXB3-209ENST00000478644 GPC6Q9Y625 555 aaPredicted RBP8.66□□□□□ -1.02
HOXB3-209ENST00000478644 SBF2Q86WG5 1849 aa8.66□□□□□ -1.02
HOXB3-209ENST00000478644 NUP188Q5SRE5 1749 aa8.66□□□□□ -1.02
HOXB3-209ENST00000478644 USP47Q96K76 1375 aa8.65□□□□□ -1.02
HOXB3-209ENST00000478644 PLEKHG2Q9H7P9 1386 aa8.65□□□□□ -1.02
HOXB3-209ENST00000478644 GDF11O95390 407 aa8.65□□□□□ -1.02
HOXB3-209ENST00000478644 HOXC9P31274 260 aa8.65□□□□□ -1.02
HOXB3-209ENST00000478644 NOS2P35228 1153 aa8.65□□□□□ -1.02
HOXB3-209ENST00000478644 TNP2Q05952 138 aa8.65□□□□□ -1.02
HOXB3-209ENST00000478644 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.02
HOXB3-209ENST00000478644 ZCRB1Q8TBF4 217 aaKnown RBP8.65□□□□□ -1.02
HOXB3-209ENST00000478644 MTFR1LQ9H019 292 aa8.65□□□□□ -1.02
HOXB3-209ENST00000478644 TFIP11Q9UBB9 837 aaKnown RBP8.65□□□□□ -1.02
HOXB3-209ENST00000478644 MAFBQ9Y5Q3 323 aaPredicted RBP8.65□□□□□ -1.02
HOXB3-209ENST00000478644 EML1O00423 815 aa8.64□□□□□ -1.03
HOXB3-209ENST00000478644 FYB1O15117 783 aa8.64□□□□□ -1.03
HOXB3-209ENST00000478644 ATXN7O15265 892 aaPredicted RBP8.64□□□□□ -1.03
HOXB3-209ENST00000478644 CTBSQ01459 385 aa8.64□□□□□ -1.03
HOXB3-209ENST00000478644 SLC9A9Q8IVB4 645 aa8.64□□□□□ -1.03
HOXB3-209ENST00000478644 TNS4Q8IZW8 715 aa8.64□□□□□ -1.03
HOXB3-209ENST00000478644 RAPGEF4Q8WZA2 1011 aa8.64□□□□□ -1.03
HOXB3-209ENST00000478644 HCN2Q9UL51 889 aa8.64□□□□□ -1.03
HOXB3-209ENST00000478644 LTN1O94822 1766 aa8.63□□□□□ -1.03
HOXB3-209ENST00000478644 FAM157BP0CG42 384 aa8.63□□□□□ -1.03
HOXB3-209ENST00000478644 HIRAP54198 1017 aaPredicted RBP8.63□□□□□ -1.03
HOXB3-209ENST00000478644 ARSJQ5FYB0 599 aaPredicted RBP8.63□□□□□ -1.03
HOXB3-209ENST00000478644 C1orf229Q6ZS94 237 aaPredicted RBP8.63□□□□□ -1.03
HOXB3-209ENST00000478644 GOLGA6L1Q8N7Z2 621 aa8.63□□□□□ -1.03
HOXB3-209ENST00000478644 FLAD1Q8NFF5 587 aa8.63□□□□□ -1.03
HOXB3-209ENST00000478644 RGPD5Q99666 1765 aa8.63□□□□□ -1.03
HOXB3-209ENST00000478644 NHSQ6T4R5 1651 aa8.62□□□□□ -1.03
HOXB3-209ENST00000478644 INSRP06213 1382 aa8.62□□□□□ -1.03
HOXB3-209ENST00000478644 FLT4P35916 1363 aa8.62□□□□□ -1.03
HOXB3-209ENST00000478644 MAP3K19Q56UN5 1328 aa8.62□□□□□ -1.03
HOXB3-209ENST00000478644 ARAFP10398 606 aa8.62□□□□□ -1.03
HOXB3-209ENST00000478644 MAPTP10636 758 aaKnown RBP8.62□□□□□ -1.03
HOXB3-209ENST00000478644 BMP4P12644 408 aa8.62□□□□□ -1.03
HOXB3-209ENST00000478644 IRS1P35568 1242 aa8.62□□□□□ -1.03
HOXB3-209ENST00000478644 TXLNAP40222 546 aa8.62□□□□□ -1.03
HOXB3-209ENST00000478644 LAMC2Q13753 1193 aa8.62□□□□□ -1.03
HOXB3-209ENST00000478644 BEND7Q8N7W2 519 aaPredicted RBP8.62□□□□□ -1.03
HOXB3-209ENST00000478644 DDX54Q8TDD1 881 aaKnown RBP8.62□□□□□ -1.03
HOXB3-209ENST00000478644 PPP1R12CQ9BZL4 782 aa8.62□□□□□ -1.03
HOXB3-209ENST00000478644 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
HOXB3-209ENST00000478644 NSD2O96028 1365 aa8.61□□□□□ -1.03
HOXB3-209ENST00000478644 PCDH11XQ9BZA7 1347 aa8.61□□□□□ -1.03
HOXB3-209ENST00000478644 PCDH11YQ9BZA8 1340 aa8.61□□□□□ -1.03
HOXB3-209ENST00000478644 POLD1P28340 1107 aa8.61□□□□□ -1.03
HOXB3-209ENST00000478644 C1orf53Q5VUE5 145 aa8.61□□□□□ -1.03
HOXB3-209ENST00000478644 SLCO4C1Q6ZQN7 724 aa8.61□□□□□ -1.03
HOXB3-209ENST00000478644 GALNT6Q8NCL4 622 aa8.61□□□□□ -1.03
HOXB3-209ENST00000478644 NEDD1Q8NHV4 660 aa8.61□□□□□ -1.03
HOXB3-209ENST00000478644 AVENQ9NQS1 362 aaPredicted RBP8.61□□□□□ -1.03
HOXB3-209ENST00000478644 MAP3K5Q99683 1374 aa8.61□□□□□ -1.03
HOXB3-209ENST00000478644 CNTNAP5Q8WYK1 1306 aa8.6□□□□□ -1.03
HOXB3-209ENST00000478644 SERTM1A2A2V5 107 aa8.6□□□□□ -1.03
HOXB3-209ENST00000478644 PHF20L1A8MW92 1017 aa8.6□□□□□ -1.03
HOXB3-209ENST00000478644 EFSO43281 561 aa8.6□□□□□ -1.03
HOXB3-209ENST00000478644 PSMA6P60900 246 aaKnown RBP8.6□□□□□ -1.03
HOXB3-209ENST00000478644 STAG2Q8N3U4 1231 aa8.6□□□□□ -1.03
HOXB3-209ENST00000478644 EDARADDQ8WWZ3 215 aa8.6□□□□□ -1.03
HOXB3-209ENST00000478644 SMARCC1Q92922 1105 aaPredicted RBP8.6□□□□□ -1.03
HOXB3-209ENST00000478644 LTV1Q96GA3 475 aaPredicted RBP8.6□□□□□ -1.03
HOXB3-209ENST00000478644 CALR3Q96L12 384 aaKnown RBP8.6□□□□□ -1.03
HOXB3-209ENST00000478644 SPG7Q9UQ90 795 aa8.6□□□□□ -1.03
HOXB3-209ENST00000478644 DNMT3AQ9Y6K1 912 aaPredicted RBP8.6□□□□□ -1.03
HOXB3-209ENST00000478644 SHISA8B8ZZ34 492 aa8.59□□□□□ -1.03
HOXB3-209ENST00000478644 YY1P25490 414 aa8.59□□□□□ -1.03
HOXB3-209ENST00000478644 KCTD17Q8N5Z5 321 aa8.59□□□□□ -1.03
HOXB3-209ENST00000478644 GAS2L2Q8NHY3 880 aa8.59□□□□□ -1.03
HOXB3-209ENST00000478644 ACSBG1Q96GR2 724 aa8.59□□□□□ -1.03
HOXB3-209ENST00000478644 ARID3AQ99856 593 aa8.59□□□□□ -1.03
HOXB3-209ENST00000478644 TSPAN10Q9H1Z9 355 aaPredicted RBP8.59□□□□□ -1.03
HOXB3-209ENST00000478644 TFCP2L1Q9NZI6 479 aa8.59□□□□□ -1.03
HOXB3-209ENST00000478644 WASHC2AQ641Q2 1341 aa8.58□□□□□ -1.04
HOXB3-209ENST00000478644 NSD3Q9BZ95 1437 aa8.58□□□□□ -1.04
HOXB3-209ENST00000478644 HSPA5P11021 654 aaKnown RBP8.58□□□□□ -1.04
HOXB3-209ENST00000478644 RASA1P20936 1047 aa8.58□□□□□ -1.04
HOXB3-209ENST00000478644 TBCELQ5QJ74 424 aa8.58□□□□□ -1.04
HOXB3-209ENST00000478644 NBPF6Q5VWK0 638 aa8.58□□□□□ -1.04
HOXB3-209ENST00000478644 BICDL1Q6ZP65 573 aa8.58□□□□□ -1.04
HOXB3-209ENST00000478644 SYTL4Q96C24 671 aaPredicted RBP8.58□□□□□ -1.04
HOXB3-209ENST00000478644 NBPF4Q96M43 638 aa8.58□□□□□ -1.04
HOXB3-209ENST00000478644 GGNBP2Q9H3C7 697 aa8.58□□□□□ -1.04
HOXB3-209ENST00000478644 GGA1Q9UJY5 639 aa8.58□□□□□ -1.04
HOXB3-209ENST00000478644 CASZ1Q86V15 1759 aa8.58□□□□□ -1.04
HOXB3-209ENST00000478644 SFI1A8K8P3 1242 aa8.57□□□□□ -1.04
HOXB3-209ENST00000478644 C21orf2O43822 256 aa8.57□□□□□ -1.04
HOXB3-209ENST00000478644 ZBTB7AO95365 584 aa8.57□□□□□ -1.04
HOXB3-209ENST00000478644 HSP90AB1P08238 724 aaKnown RBP8.57□□□□□ -1.04
HOXB3-209ENST00000478644 EPXP11678 715 aa8.57□□□□□ -1.04
HOXB3-209ENST00000478644 PDIA4P13667 645 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms