RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 ARMC5Q96C12 935 aa16.19■□□□□ 0.18
TDP2-204ENST00000478507 OPTNQ96CV9 577 aa16.19■□□□□ 0.18
TDP2-204ENST00000478507 SUCLG2Q96I99 432 aa16.19■□□□□ 0.18
TDP2-204ENST00000478507 TDRD3Q9H7E2 651 aaKnown RBP16.19■□□□□ 0.18
TDP2-204ENST00000478507 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.19■□□□□ 0.18
TDP2-204ENST00000478507 SALL2Q9Y467 1007 aaPredicted RBP16.19■□□□□ 0.18
TDP2-204ENST00000478507 GRIK5Q16478 980 aa16.18■□□□□ 0.18
TDP2-204ENST00000478507 OTUD7BQ6GQQ9 843 aa16.18■□□□□ 0.18
TDP2-204ENST00000478507 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.18■□□□□ 0.18
TDP2-204ENST00000478507 CNKSR2Q8WXI2 1034 aa16.18■□□□□ 0.18
TDP2-204ENST00000478507 ELP3Q9H9T3 547 aa16.18■□□□□ 0.18
TDP2-204ENST00000478507 C9orf78Q9NZ63 289 aaPredicted RBP16.18■□□□□ 0.18
TDP2-204ENST00000478507 NBPF7P0C2Y1 421 aaPredicted RBP16.17■□□□□ 0.18
TDP2-204ENST00000478507 CRKP46108 304 aa16.17■□□□□ 0.18
TDP2-204ENST00000478507 SP3Q02447 781 aa16.17■□□□□ 0.18
TDP2-204ENST00000478507 VGLL4Q14135 290 aa16.17■□□□□ 0.18
TDP2-204ENST00000478507 RABL6Q3YEC7 729 aaPredicted RBP16.17■□□□□ 0.18
TDP2-204ENST00000478507 FBXO33Q7Z6M2 555 aa16.17■□□□□ 0.18
TDP2-204ENST00000478507 VGLL2Q8N8G2 317 aa16.17■□□□□ 0.18
TDP2-204ENST00000478507 BRI3BPQ8WY22 251 aa16.17■□□□□ 0.18
TDP2-204ENST00000478507 SRCIN1Q9C0H9 1055 aa16.17■□□□□ 0.18
TDP2-204ENST00000478507 TMEM39BQ9GZU3 492 aa16.17■□□□□ 0.18
TDP2-204ENST00000478507 EFCC1Q9HA90 598 aa16.16■□□□□ 0.18
TDP2-204ENST00000478507 MROH5Q6ZUA9 1318 aa16.16■□□□□ 0.18
TDP2-204ENST00000478507 TCP10L2B9ZVM9 353 aa16.15■□□□□ 0.18
TDP2-204ENST00000478507 HDLBPQ00341 1268 aaKnown RBP16.15■□□□□ 0.18
TDP2-204ENST00000478507 SLC4A10Q6U841 1118 aa16.15■□□□□ 0.18
TDP2-204ENST00000478507 ANKRD44Q8N8A2 993 aa16.15■□□□□ 0.18
TDP2-204ENST00000478507 MAP3K9P80192 1104 aa16.14■□□□□ 0.17
TDP2-204ENST00000478507 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.17
TDP2-204ENST00000478507 ZNF333Q96JL9 665 aa16.14■□□□□ 0.17
TDP2-204ENST00000478507 BICC1Q9H694 974 aaKnown RBP16.14■□□□□ 0.17
TDP2-204ENST00000478507 ZNF521Q96K83 1311 aa16.14■□□□□ 0.17
TDP2-204ENST00000478507 ZSWIM8A7E2V4 1837 aa16.13■□□□□ 0.17
TDP2-204ENST00000478507 SPDYE5A6NIY4 337 aa16.13■□□□□ 0.17
TDP2-204ENST00000478507 GTF2A2P52657 109 aa16.13■□□□□ 0.17
TDP2-204ENST00000478507 LRRC24Q50LG9 513 aa16.13■□□□□ 0.17
TDP2-204ENST00000478507 GCC1Q96CN9 775 aa16.13■□□□□ 0.17
TDP2-204ENST00000478507 ZDHHC15Q96MV8 337 aa16.13■□□□□ 0.17
TDP2-204ENST00000478507 MRIQ9BWK5 157 aa16.13■□□□□ 0.17
TDP2-204ENST00000478507 IQSEC3Q9UPP2 1182 aaPredicted RBP16.13■□□□□ 0.17
TDP2-204ENST00000478507 SNCAIPQ9Y6H5 919 aa16.13■□□□□ 0.17
TDP2-204ENST00000478507 CCL15-CCL14A0A0B4J2E2 113 aa16.12■□□□□ 0.17
TDP2-204ENST00000478507 PDE8BO95263 885 aa16.12■□□□□ 0.17
TDP2-204ENST00000478507 EN2P19622 333 aaPredicted RBP16.12■□□□□ 0.17
TDP2-204ENST00000478507 TNNI2P48788 182 aa16.12■□□□□ 0.17
TDP2-204ENST00000478507 CCL15Q16663 113 aa16.12■□□□□ 0.17
TDP2-204ENST00000478507 TBC1D22AQ8WUA7 517 aa16.12■□□□□ 0.17
TDP2-204ENST00000478507 OTUD5Q96G74 571 aa16.12■□□□□ 0.17
TDP2-204ENST00000478507 KIF16BQ96L93 1317 aa16.12■□□□□ 0.17
TDP2-204ENST00000478507 FGFR2P21802 821 aa16.11■□□□□ 0.17
TDP2-204ENST00000478507 CACNB3P54284 484 aa16.11■□□□□ 0.17
TDP2-204ENST00000478507 TAF1CQ15572 869 aaPredicted RBP16.11■□□□□ 0.17
TDP2-204ENST00000478507 HABP4Q5JVS0 413 aaKnown RBP16.11■□□□□ 0.17
TDP2-204ENST00000478507 FKBP1CQ5VVH2 108 aa16.11■□□□□ 0.17
TDP2-204ENST00000478507 APOBEC3HQ6NTF7 200 aaKnown RBP16.11■□□□□ 0.17
TDP2-204ENST00000478507 FAM83AQ86UY5 434 aa16.11■□□□□ 0.17
TDP2-204ENST00000478507 TEKT1Q969V4 418 aa16.11■□□□□ 0.17
TDP2-204ENST00000478507 ZFYVE28Q9HCC9 887 aa16.11■□□□□ 0.17
TDP2-204ENST00000478507 CSADQ9Y600 493 aa16.11■□□□□ 0.17
TDP2-204ENST00000478507 PTCH2Q9Y6C5 1203 aa16.11■□□□□ 0.17
TDP2-204ENST00000478507 RPAP1Q9BWH6 1393 aaPredicted RBP16.11■□□□□ 0.17
TDP2-204ENST00000478507 BCAMP50895 628 aa16.1■□□□□ 0.17
TDP2-204ENST00000478507 CHAF1AQ13111 956 aaPredicted RBP16.1■□□□□ 0.17
TDP2-204ENST00000478507 CAVIN4Q5BKX8 364 aa16.1■□□□□ 0.17
TDP2-204ENST00000478507 METTL24Q5JXM2 366 aa16.1■□□□□ 0.17
TDP2-204ENST00000478507 VPS37DQ86XT2 251 aa16.1■□□□□ 0.17
TDP2-204ENST00000478507 ZCCHC17Q9NP64 241 aaKnown RBP16.1■□□□□ 0.17
TDP2-204ENST00000478507 SUGT1Q9Y2Z0 365 aa16.1■□□□□ 0.17
TDP2-204ENST00000478507 MYH13Q9UKX3 1938 aa16.09■□□□□ 0.17
TDP2-204ENST00000478507 CEP290O15078 2479 aa16.09■□□□□ 0.17
TDP2-204ENST00000478507 IRF6O14896 467 aa16.09■□□□□ 0.17
TDP2-204ENST00000478507 TLR2O60603 784 aa16.09■□□□□ 0.17
TDP2-204ENST00000478507 ERO1BQ86YB8 467 aa16.09■□□□□ 0.17
TDP2-204ENST00000478507 MRPL50Q8N5N7 158 aaKnown RBP16.09■□□□□ 0.17
TDP2-204ENST00000478507 KLHDC4Q8TBB5 520 aa16.09■□□□□ 0.17
TDP2-204ENST00000478507 WRNIP1Q96S55 665 aa16.09■□□□□ 0.17
TDP2-204ENST00000478507 BTBD19C9JJ37 291 aa16.08■□□□□ 0.16
TDP2-204ENST00000478507 ANP32CO43423 234 aa16.08■□□□□ 0.16
TDP2-204ENST00000478507 CETPP11597 493 aa16.08■□□□□ 0.16
TDP2-204ENST00000478507 HHIPL2Q6UWX4 724 aa16.08■□□□□ 0.16
TDP2-204ENST00000478507 ZKSCAN4Q969J2 545 aaPredicted RBP16.08■□□□□ 0.16
TDP2-204ENST00000478507 ARHGAP39Q9C0H5 1083 aa16.08■□□□□ 0.16
TDP2-204ENST00000478507 USP44Q9H0E7 712 aa16.08■□□□□ 0.16
TDP2-204ENST00000478507 RFX5P48382 616 aaPredicted RBP16.07■□□□□ 0.16
TDP2-204ENST00000478507 LACTBP83111 547 aaPredicted RBP16.07■□□□□ 0.16
TDP2-204ENST00000478507 PPIL2Q13356 520 aa16.07■□□□□ 0.16
TDP2-204ENST00000478507 ARHGEF6Q15052 776 aa16.07■□□□□ 0.16
TDP2-204ENST00000478507 PUM3Q15397 648 aaKnown RBP16.07■□□□□ 0.16
TDP2-204ENST00000478507 SLC9C1Q4G0N8 1177 aa16.07■□□□□ 0.16
TDP2-204ENST00000478507 MAST3O60307 1309 aa16.07■□□□□ 0.16
TDP2-204ENST00000478507 RANBP2P49792 3224 aaKnown RBP16.06■□□□□ 0.16
TDP2-204ENST00000478507 PTPRCP08575 1304 aa16.06■□□□□ 0.16
TDP2-204ENST00000478507 FRAT2O75474 233 aaPredicted RBP16.06■□□□□ 0.16
TDP2-204ENST00000478507 SNAPC2Q13487 334 aa16.06■□□□□ 0.16
TDP2-204ENST00000478507 ADGRA2Q96PE1 1338 aa16.05■□□□□ 0.16
TDP2-204ENST00000478507 NBPF11Q86T75 865 aa16.05■□□□□ 0.16
TDP2-204ENST00000478507 HOOK2Q96ED9 719 aa16.05■□□□□ 0.16
TDP2-204ENST00000478507 TMEM106CQ9BVX2 250 aa16.05■□□□□ 0.16
TDP2-204ENST00000478507 TMOD2Q9NZR1 351 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms