RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 NBPF12Q5TAG4 269 aaPredicted RBP17.16■□□□□ 0.34
RCC1-211ENST00000478232 DIEXFQ68CQ4 756 aaKnown RBP17.16■□□□□ 0.34
RCC1-211ENST00000478232 MEIS3Q99687 375 aa17.16■□□□□ 0.34
RCC1-211ENST00000478232 AOX1Q06278 1338 aa17.16■□□□□ 0.34
RCC1-211ENST00000478232 IL15P40933 162 aaPredicted RBP17.15■□□□□ 0.34
RCC1-211ENST00000478232 GRIK5Q16478 980 aa17.15■□□□□ 0.34
RCC1-211ENST00000478232 WDR66Q8TBY9 1149 aa17.15■□□□□ 0.34
RCC1-211ENST00000478232 TEKT1Q969V4 418 aa17.15■□□□□ 0.34
RCC1-211ENST00000478232 SIL1Q9H173 461 aa17.15■□□□□ 0.34
RCC1-211ENST00000478232 COPRSQ9NQ92 184 aa17.15■□□□□ 0.34
RCC1-211ENST00000478232 USP2O75604 605 aaPredicted RBP17.14■□□□□ 0.33
RCC1-211ENST00000478232 TNNI2P48788 182 aa17.14■□□□□ 0.33
RCC1-211ENST00000478232 INHBEP58166 350 aa17.14■□□□□ 0.33
RCC1-211ENST00000478232 SREBF2Q12772 1141 aa17.14■□□□□ 0.33
RCC1-211ENST00000478232 DGKZQ13574 1117 aa17.14■□□□□ 0.33
RCC1-211ENST00000478232 SPRYD7Q5W111 196 aa17.14■□□□□ 0.33
RCC1-211ENST00000478232 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
RCC1-211ENST00000478232 MCOLN1Q9GZU1 580 aa17.14■□□□□ 0.33
RCC1-211ENST00000478232 GNL3LQ9NVN8 582 aaKnown RBP17.14■□□□□ 0.33
RCC1-211ENST00000478232 BCAR3O75815 825 aa17.13■□□□□ 0.33
RCC1-211ENST00000478232 IREB2P48200 963 aaKnown RBP17.13■□□□□ 0.33
RCC1-211ENST00000478232 ATP2B3Q16720 1220 aa17.13■□□□□ 0.33
RCC1-211ENST00000478232 FRAT1Q92837 279 aaPredicted RBP17.13■□□□□ 0.33
RCC1-211ENST00000478232 ZDHHC15Q96MV8 337 aa17.13■□□□□ 0.33
RCC1-211ENST00000478232 FZD1Q9UP38 647 aa17.13■□□□□ 0.33
RCC1-211ENST00000478232 MAST3O60307 1309 aa17.13■□□□□ 0.33
RCC1-211ENST00000478232 TRIM27P14373 513 aa17.12■□□□□ 0.33
RCC1-211ENST00000478232 HNRNPUQ00839 825 aaKnown RBP eCLIP17.12■□□□□ 0.33
RCC1-211ENST00000478232 MKRN3Q13064 507 aaKnown RBP17.12■□□□□ 0.33
RCC1-211ENST00000478232 HHIPL2Q6UWX4 724 aa17.12■□□□□ 0.33
RCC1-211ENST00000478232 MANSC4A6NHS7 340 aaPredicted RBP17.11■□□□□ 0.33
RCC1-211ENST00000478232 CCDC85CA6NKD9 419 aa17.11■□□□□ 0.33
RCC1-211ENST00000478232 TCP10L2B9ZVM9 353 aa17.11■□□□□ 0.33
RCC1-211ENST00000478232 ZBTB48P10074 688 aaPredicted RBP17.11■□□□□ 0.33
RCC1-211ENST00000478232 MTX1Q13505 466 aa17.11■□□□□ 0.33
RCC1-211ENST00000478232 FKBP1CQ5VVH2 108 aa17.11■□□□□ 0.33
RCC1-211ENST00000478232 ANKRD13AQ8IZ07 590 aa17.11■□□□□ 0.33
RCC1-211ENST00000478232 CLMNQ96JQ2 1002 aa17.11■□□□□ 0.33
RCC1-211ENST00000478232 TEPSINQ96N21 525 aa17.11■□□□□ 0.33
RCC1-211ENST00000478232 PA2G4Q9UQ80 394 aaKnown RBP17.11■□□□□ 0.33
RCC1-211ENST00000478232 CASP8AP2Q9UKL3 1982 aa17.11■□□□□ 0.33
RCC1-211ENST00000478232 SEMA3EO15041 775 aa17.1■□□□□ 0.33
RCC1-211ENST00000478232 ZBTB22O15209 634 aa17.1■□□□□ 0.33
RCC1-211ENST00000478232 SRGAP3O43295 1099 aa17.1■□□□□ 0.33
RCC1-211ENST00000478232 TBC1D8O95759 1140 aa17.1■□□□□ 0.33
RCC1-211ENST00000478232 ALDH1A1P00352 501 aa17.1■□□□□ 0.33
RCC1-211ENST00000478232 NOM1Q5C9Z4 860 aaKnown RBP17.1■□□□□ 0.33
RCC1-211ENST00000478232 APOBEC3HQ6NTF7 200 aaKnown RBP17.1■□□□□ 0.33
RCC1-211ENST00000478232 TMOD2Q9NZR1 351 aa17.1■□□□□ 0.33
RCC1-211ENST00000478232 AKAP11Q9UKA4 1901 aa17.09■□□□□ 0.33
RCC1-211ENST00000478232 GNAI2P04899 355 aa17.09■□□□□ 0.33
RCC1-211ENST00000478232 ZKSCAN2Q63HK3 967 aa17.09■□□□□ 0.33
RCC1-211ENST00000478232 FAM83AQ86UY5 434 aa17.09■□□□□ 0.33
RCC1-211ENST00000478232 WNK4Q96J92 1243 aa17.09■□□□□ 0.33
RCC1-211ENST00000478232 CFHR5Q9BXR6 569 aa17.09■□□□□ 0.33
RCC1-211ENST00000478232 TMEM39BQ9GZU3 492 aa17.09■□□□□ 0.33
RCC1-211ENST00000478232 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.09■□□□□ 0.33
RCC1-211ENST00000478232 DENND2AQ9ULE3 1009 aa17.09■□□□□ 0.33
RCC1-211ENST00000478232 AKAP2Q9Y2D5 859 aa17.09■□□□□ 0.33
RCC1-211ENST00000478232 SSC5DA1L4H1 1573 aa17.09■□□□□ 0.33
RCC1-211ENST00000478232 ECM29Q5VYK3 1845 aa17.08■□□□□ 0.33
RCC1-211ENST00000478232 TIMM10P62072 90 aa17.08■□□□□ 0.32
RCC1-211ENST00000478232 CTU1Q7Z7A3 348 aaKnown RBP17.08■□□□□ 0.32
RCC1-211ENST00000478232 POTEDQ86YR6 584 aa17.08■□□□□ 0.32
RCC1-211ENST00000478232 CLUAP1Q96AJ1 413 aa17.08■□□□□ 0.32
RCC1-211ENST00000478232 HOOK2Q96ED9 719 aa17.08■□□□□ 0.32
RCC1-211ENST00000478232 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
RCC1-211ENST00000478232 GPR25O00155 361 aa17.07■□□□□ 0.32
RCC1-211ENST00000478232 LDHBP07195 334 aaKnown RBP17.07■□□□□ 0.32
RCC1-211ENST00000478232 PHKA1P46020 1223 aa17.07■□□□□ 0.32
RCC1-211ENST00000478232 MAP3K9P80192 1104 aa17.07■□□□□ 0.32
RCC1-211ENST00000478232 CCDC102BQ68D86 513 aa17.07■□□□□ 0.32
RCC1-211ENST00000478232 TNNQ9UQP3 1299 aa17.07■□□□□ 0.32
RCC1-211ENST00000478232 CACNB3P54284 484 aa17.06■□□□□ 0.32
RCC1-211ENST00000478232 OTUD7BQ6GQQ9 843 aa17.06■□□□□ 0.32
RCC1-211ENST00000478232 IFNL1Q8IU54 200 aa17.06■□□□□ 0.32
RCC1-211ENST00000478232 ZGPATQ8N5A5 531 aaKnown RBP17.06■□□□□ 0.32
RCC1-211ENST00000478232 ZNF296Q8WUU4 475 aaPredicted RBP17.06■□□□□ 0.32
RCC1-211ENST00000478232 ADORA1P30542 326 aa17.05■□□□□ 0.32
RCC1-211ENST00000478232 TFCP2Q12800 502 aa17.05■□□□□ 0.32
RCC1-211ENST00000478232 PKN2Q16513 984 aaKnown RBP17.05■□□□□ 0.32
RCC1-211ENST00000478232 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.05■□□□□ 0.32
RCC1-211ENST00000478232 CDAN1Q8IWY9 1227 aa17.05■□□□□ 0.32
RCC1-211ENST00000478232 A0A1B0GUL7 405 aa17.04■□□□□ 0.32
RCC1-211ENST00000478232 PRDX5P30044 214 aa17.04■□□□□ 0.32
RCC1-211ENST00000478232 RGS19P49795 217 aa17.04■□□□□ 0.32
RCC1-211ENST00000478232 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
RCC1-211ENST00000478232 MVPQ14764 893 aaKnown RBP17.04■□□□□ 0.32
RCC1-211ENST00000478232 TMEM57Q8N5G2 664 aa17.04■□□□□ 0.32
RCC1-211ENST00000478232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.04■□□□□ 0.32
RCC1-211ENST00000478232 XAGE2Q96GT9 111 aa17.04■□□□□ 0.32
RCC1-211ENST00000478232 ELP3Q9H9T3 547 aa17.04■□□□□ 0.32
RCC1-211ENST00000478232 DAGLAQ9Y4D2 1042 aa17.04■□□□□ 0.32
RCC1-211ENST00000478232 CSADQ9Y600 493 aa17.04■□□□□ 0.32
RCC1-211ENST00000478232 TESPA1A2RU30 521 aaPredicted RBP17.03■□□□□ 0.32
RCC1-211ENST00000478232 FKTNO75072 461 aa17.03■□□□□ 0.32
RCC1-211ENST00000478232 GJA5P36382 358 aa17.03■□□□□ 0.32
RCC1-211ENST00000478232 DIXDC1Q155Q3 683 aa17.03■□□□□ 0.32
RCC1-211ENST00000478232 SPTY2D1Q68D10 685 aaPredicted RBP17.03■□□□□ 0.32
RCC1-211ENST00000478232 CDC42EP5Q6NZY7 148 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms