RNA–Protein interactions for RNA: ENST00000478089.1

FBXO42-204, Transcript of F-box protein 42, humanhuman

TSL 1 (best)

Gene FBXO42, Length 2,920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-204ENST00000478089 NAP1L4Q99733 375 aaKnown RBP9.23□□□□□ -0.93
FBXO42-204ENST00000478089 APBA2Q99767 749 aa9.23□□□□□ -0.93
FBXO42-204ENST00000478089 ZHX3Q9H4I2 956 aa9.23□□□□□ -0.93
FBXO42-204ENST00000478089 TMCC3Q9ULS5 477 aa9.23□□□□□ -0.93
FBXO42-204ENST00000478089 POLR3AO14802 1390 aaPredicted RBP9.23□□□□□ -0.93
FBXO42-204ENST00000478089 NSD3Q9BZ95 1437 aa9.22□□□□□ -0.93
FBXO42-204ENST00000478089 IFRD1O00458 451 aaPredicted RBP9.22□□□□□ -0.93
FBXO42-204ENST00000478089 RIPK4P57078 832 aa9.22□□□□□ -0.93
FBXO42-204ENST00000478089 MECOMQ03112 1051 aa9.22□□□□□ -0.93
FBXO42-204ENST00000478089 OTUD6AQ7L8S5 288 aa9.22□□□□□ -0.93
FBXO42-204ENST00000478089 UHMK1Q8TAS1 419 aaKnown RBP9.22□□□□□ -0.93
FBXO42-204ENST00000478089 RNF39Q9H2S5 420 aa9.22□□□□□ -0.93
FBXO42-204ENST00000478089 ZBTB3Q9H5J0 574 aa9.22□□□□□ -0.93
FBXO42-204ENST00000478089 PCDHGA4Q9Y5G9 962 aa9.22□□□□□ -0.93
FBXO42-204ENST00000478089 ZNF521Q96K83 1311 aa9.22□□□□□ -0.93
FBXO42-204ENST00000478089 CLDN10P78369 228 aa9.22□□□□□ -0.93
FBXO42-204ENST00000478089 TDRD7Q8NHU6 1098 aaKnown RBP9.22□□□□□ -0.93
FBXO42-204ENST00000478089 FAM126AQ9BYI3 521 aaPredicted RBP9.22□□□□□ -0.93
FBXO42-204ENST00000478089 RABL2AQ9UBK7 228 aaPredicted RBP9.22□□□□□ -0.93
FBXO42-204ENST00000478089 NINLQ9Y2I6 1382 aa9.22□□□□□ -0.93
FBXO42-204ENST00000478089 CCDC66A2RUB6 948 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 NOP2P46087 812 aaKnown RBP9.21□□□□□ -0.93
FBXO42-204ENST00000478089 KIAA1958Q8N8K9 716 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 C17orf50Q8WW18 174 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 CDCA7LQ96GN5 454 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 MKNK1Q9BUB5 465 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 FANCLQ9NW38 375 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 USP25Q9UHP3 1055 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 STRCQ7RTU9 1775 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 GOLGA6L6A8MZA4 724 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 RGS20O76081 388 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 GUCY2CP25092 1073 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 STIP1P31948 543 aaKnown RBP9.21□□□□□ -0.93
FBXO42-204ENST00000478089 MAPK8P45983 427 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 NEK9Q8TD19 979 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 SLC26A8Q96RN1 970 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 CD248Q9HCU0 757 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 IP6K2Q9UHH9 426 aa9.21□□□□□ -0.93
FBXO42-204ENST00000478089 ALKQ9UM73 1620 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 NSD2O96028 1365 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 ANKRD36BQ8N2N9 1353 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 SHTN1A0MZ66 631 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 TNNT1P13805 278 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 TRDNQ13061 729 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 LRRC41Q15345 812 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 C10orf62Q5T681 223 aaPredicted RBP9.21□□□□□ -0.94
FBXO42-204ENST00000478089 TRIM74Q86UV6 250 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 TRIM73Q86UV7 250 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 TNPO1Q92973 898 aaKnown RBP9.21□□□□□ -0.94
FBXO42-204ENST00000478089 TEKT1Q969V4 418 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 KIF12Q96FN5 646 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 KIF2CQ99661 725 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 KIF3AQ9Y496 699 aa9.21□□□□□ -0.94
FBXO42-204ENST00000478089 PLEKHH1Q9ULM0 1364 aa9.2□□□□□ -0.94
FBXO42-204ENST00000478089 CCDC196A0A1B0GTZ2 297 aa9.2□□□□□ -0.94
FBXO42-204ENST00000478089 PRPF40AO75400 957 aaKnown RBP9.2□□□□□ -0.94
FBXO42-204ENST00000478089 CDKN1CP49918 316 aaPredicted RBP9.2□□□□□ -0.94
FBXO42-204ENST00000478089 FKBP4Q02790 459 aaKnown RBP eCLIP9.2□□□□□ -0.94
FBXO42-204ENST00000478089 FXNQ16595 210 aa9.2□□□□□ -0.94
FBXO42-204ENST00000478089 TAX1BP1Q86VP1 789 aa9.2□□□□□ -0.94
FBXO42-204ENST00000478089 CCDC34Q96HJ3 373 aa9.2□□□□□ -0.94
FBXO42-204ENST00000478089 SLC12A5Q9H2X9 1139 aa9.2□□□□□ -0.94
FBXO42-204ENST00000478089 PCDHGC3Q9UN70 934 aa9.2□□□□□ -0.94
FBXO42-204ENST00000478089 A2ML1A8K2U0 1454 aa9.2□□□□□ -0.94
FBXO42-204ENST00000478089 LCA5Q86VQ0 697 aa9.2□□□□□ -0.94
FBXO42-204ENST00000478089 SRA1Q9HD15 236 aaKnown RBP9.2□□□□□ -0.94
FBXO42-204ENST00000478089 MKS1Q9NXB0 559 aa9.2□□□□□ -0.94
FBXO42-204ENST00000478089 ITM2BQ9Y287 266 aa9.2□□□□□ -0.94
FBXO42-204ENST00000478089 YTHDC2Q9H6S0 1430 aaKnown RBP9.2□□□□□ -0.94
FBXO42-204ENST00000478089 SHPRHQ149N8 1683 aa9.19□□□□□ -0.94
FBXO42-204ENST00000478089 PABPN1LA6NDY0 278 aaKnown RBP9.19□□□□□ -0.94
FBXO42-204ENST00000478089 ATF4P18848 351 aaPredicted RBP9.19□□□□□ -0.94
FBXO42-204ENST00000478089 FAM160A1Q05DH4 1040 aa9.19□□□□□ -0.94
FBXO42-204ENST00000478089 SRPK1Q96SB4 655 aaKnown RBP9.19□□□□□ -0.94
FBXO42-204ENST00000478089 CASS4Q9NQ75 786 aa9.19□□□□□ -0.94
FBXO42-204ENST00000478089 IRAK4Q9NWZ3 460 aa9.19□□□□□ -0.94
FBXO42-204ENST00000478089 DLC1Q96QB1 1528 aa9.19□□□□□ -0.94
FBXO42-204ENST00000478089 TNNT3P45378 269 aaPredicted RBP9.19□□□□□ -0.94
FBXO42-204ENST00000478089 JAMLQ86YT9 394 aa9.19□□□□□ -0.94
FBXO42-204ENST00000478089 NDUFAF2Q8N183 169 aa9.19□□□□□ -0.94
FBXO42-204ENST00000478089 GINM1Q9NU53 330 aa9.19□□□□□ -0.94
FBXO42-204ENST00000478089 TMOD4Q9NZQ9 345 aa9.19□□□□□ -0.94
FBXO42-204ENST00000478089 CGNL1Q0VF96 1302 aa9.19□□□□□ -0.94
FBXO42-204ENST00000478089 SETD1AO15047 1707 aaKnown RBP9.19□□□□□ -0.94
FBXO42-204ENST00000478089 BOLA2-SMG1P6H3BVE0 249 aa9.18□□□□□ -0.94
FBXO42-204ENST00000478089 FBXO45P0C2W1 286 aa9.18□□□□□ -0.94
FBXO42-204ENST00000478089 MSL1Q68DK7 614 aa9.18□□□□□ -0.94
FBXO42-204ENST00000478089 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.18□□□□□ -0.94
FBXO42-204ENST00000478089 FAM221BA6H8Z2 402 aa9.18□□□□□ -0.94
FBXO42-204ENST00000478089 FOSP01100 380 aaPredicted RBP9.18□□□□□ -0.94
FBXO42-204ENST00000478089 HCLS1P14317 486 aaPredicted RBP9.18□□□□□ -0.94
FBXO42-204ENST00000478089 POU5F1BQ06416 359 aa9.18□□□□□ -0.94
FBXO42-204ENST00000478089 CCDC93Q567U6 631 aa9.18□□□□□ -0.94
FBXO42-204ENST00000478089 ARHGEF25Q86VW2 580 aa9.18□□□□□ -0.94
FBXO42-204ENST00000478089 GOLGA1Q92805 767 aa9.18□□□□□ -0.94
FBXO42-204ENST00000478089 HLA-CQ95604 372 aa9.18□□□□□ -0.94
FBXO42-204ENST00000478089 VMP1Q96GC9 406 aa9.18□□□□□ -0.94
FBXO42-204ENST00000478089 ARNT2Q9HBZ2 717 aa9.18□□□□□ -0.94
FBXO42-204ENST00000478089 ACAD8Q9UKU7 415 aa9.18□□□□□ -0.94
FBXO42-204ENST00000478089 GJA3Q9Y6H8 435 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms