RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 COL17A1Q9UMD9 1497 aaPredicted RBP8.43□□□□□ -1.06
LMBR1-216ENST00000477983 WDR64B1ANS9 1081 aa8.42□□□□□ -1.06
LMBR1-216ENST00000477983 DRD2P14416 443 aa8.42□□□□□ -1.06
LMBR1-216ENST00000477983 C2CD4AQ8NCU7 369 aaPredicted RBP8.42□□□□□ -1.06
LMBR1-216ENST00000477983 EZH1Q92800 747 aaPredicted RBP8.42□□□□□ -1.06
LMBR1-216ENST00000477983 CPNE3O75131 537 aaKnown RBP8.41□□□□□ -1.06
LMBR1-216ENST00000477983 ADAMTS4O75173 837 aa8.41□□□□□ -1.06
LMBR1-216ENST00000477983 CYP11A1P05108 521 aa8.41□□□□□ -1.06
LMBR1-216ENST00000477983 ITPKAP23677 461 aa8.41□□□□□ -1.06
LMBR1-216ENST00000477983 MCTP1Q6DN14 999 aa8.41□□□□□ -1.06
LMBR1-216ENST00000477983 CDPF1Q6NVV7 123 aa8.41□□□□□ -1.06
LMBR1-216ENST00000477983 KRTAP19-1Q8IUB9 90 aa8.41□□□□□ -1.06
LMBR1-216ENST00000477983 MFSD14AQ96MC6 490 aa8.41□□□□□ -1.06
LMBR1-216ENST00000477983 DNAJC25Q9H1X3 360 aa8.41□□□□□ -1.06
LMBR1-216ENST00000477983 ZFYVE1Q9HBF4 777 aa8.41□□□□□ -1.06
LMBR1-216ENST00000477983 FAM95CA0A1B0GW59 222 aa8.4□□□□□ -1.06
LMBR1-216ENST00000477983 SUPT5HO00267 1087 aaKnown RBP8.4□□□□□ -1.06
LMBR1-216ENST00000477983 B3GALT4O96024 378 aa8.4□□□□□ -1.06
LMBR1-216ENST00000477983 F13BP05160 661 aa8.4□□□□□ -1.06
LMBR1-216ENST00000477983 MAOBP27338 520 aa8.4□□□□□ -1.06
LMBR1-216ENST00000477983 GP2P55259 537 aaKnown RBP8.4□□□□□ -1.06
LMBR1-216ENST00000477983 PTPN12Q05209 780 aaKnown RBP8.4□□□□□ -1.06
LMBR1-216ENST00000477983 PDE4CQ08493 712 aa8.4□□□□□ -1.06
LMBR1-216ENST00000477983 ORC1Q13415 861 aa8.4□□□□□ -1.06
LMBR1-216ENST00000477983 POU4F3Q15319 338 aa8.4□□□□□ -1.06
LMBR1-216ENST00000477983 CPSF6Q16630 551 aaKnown RBP eCLIP8.4□□□□□ -1.06
LMBR1-216ENST00000477983 GIMAP7Q8NHV1 300 aa8.4□□□□□ -1.06
LMBR1-216ENST00000477983 ARID3AQ99856 593 aa8.4□□□□□ -1.06
LMBR1-216ENST00000477983 OAS3Q9Y6K5 1087 aaKnown RBP8.4□□□□□ -1.06
LMBR1-216ENST00000477983 CTSBP07858 339 aa8.39□□□□□ -1.07
LMBR1-216ENST00000477983 RXRBP28702 533 aa8.39□□□□□ -1.07
LMBR1-216ENST00000477983 USP11P51784 963 aa8.39□□□□□ -1.07
LMBR1-216ENST00000477983 HP1BP3Q5SSJ5 553 aaPredicted RBP8.39□□□□□ -1.07
LMBR1-216ENST00000477983 FBLIM1Q8WUP2 373 aa8.39□□□□□ -1.07
LMBR1-216ENST00000477983 ZNF576Q9H609 170 aa8.39□□□□□ -1.07
LMBR1-216ENST00000477983 PIM2Q9P1W9 311 aa8.39□□□□□ -1.07
LMBR1-216ENST00000477983 BTBD11A6QL63 1104 aa8.38□□□□□ -1.07
LMBR1-216ENST00000477983 ADH5P11766 374 aa8.38□□□□□ -1.07
LMBR1-216ENST00000477983 NFKBIBQ15653 356 aa8.38□□□□□ -1.07
LMBR1-216ENST00000477983 PAOXQ6QHF9 649 aa8.38□□□□□ -1.07
LMBR1-216ENST00000477983 DDX54Q8TDD1 881 aaKnown RBP8.38□□□□□ -1.07
LMBR1-216ENST00000477983 TRIM56Q9BRZ2 755 aaKnown RBP8.38□□□□□ -1.07
LMBR1-216ENST00000477983 EHD4Q9H223 541 aa8.38□□□□□ -1.07
LMBR1-216ENST00000477983 NPHS2Q9NP85 383 aa8.38□□□□□ -1.07
LMBR1-216ENST00000477983 ATG3Q9NT62 314 aa8.38□□□□□ -1.07
LMBR1-216ENST00000477983 SYNGAP1Q96PV0 1343 aa8.37□□□□□ -1.07
LMBR1-216ENST00000477983 GPR182O15218 404 aa8.37□□□□□ -1.07
LMBR1-216ENST00000477983 WNT11O96014 354 aa8.37□□□□□ -1.07
LMBR1-216ENST00000477983 HOXA10P31260 410 aaPredicted RBP8.37□□□□□ -1.07
LMBR1-216ENST00000477983 PRPF40BQ6NWY9 871 aaKnown RBP8.37□□□□□ -1.07
LMBR1-216ENST00000477983 CCDC74AQ96AQ1 378 aa8.37□□□□□ -1.07
LMBR1-216ENST00000477983 YIPF2Q9BWQ6 316 aa8.37□□□□□ -1.07
LMBR1-216ENST00000477983 RBCK1Q9BYM8 510 aa8.37□□□□□ -1.07
LMBR1-216ENST00000477983 GSX1Q9H4S2 264 aaPredicted RBP8.37□□□□□ -1.07
LMBR1-216ENST00000477983 LEMD3Q9Y2U8 911 aa8.37□□□□□ -1.07
LMBR1-216ENST00000477983 EIF1AYO14602 144 aaKnown RBP8.36□□□□□ -1.07
LMBR1-216ENST00000477983 IRAK1P51617 712 aa8.36□□□□□ -1.07
LMBR1-216ENST00000477983 RPS26P11Q5JNZ5 115 aaPredicted RBP8.36□□□□□ -1.07
LMBR1-216ENST00000477983 SHISA5Q8N114 240 aa8.36□□□□□ -1.07
LMBR1-216ENST00000477983 RETREG2Q8NC44 543 aa8.36□□□□□ -1.07
LMBR1-216ENST00000477983 CCER1Q8TC90 406 aaPredicted RBP8.36□□□□□ -1.07
LMBR1-216ENST00000477983 ALKBH8Q96BT7 664 aaKnown RBP8.36□□□□□ -1.07
LMBR1-216ENST00000477983 OSBPL1AQ9BXW6 950 aa8.36□□□□□ -1.07
LMBR1-216ENST00000477983 NIF3L1Q9GZT8 377 aa8.36□□□□□ -1.07
LMBR1-216ENST00000477983 ABCB6Q9NP58 842 aa8.36□□□□□ -1.07
LMBR1-216ENST00000477983 PRKAG2Q9UGJ0 569 aa8.36□□□□□ -1.07
LMBR1-216ENST00000477983 FOSL1P15407 271 aa8.35□□□□□ -1.07
LMBR1-216ENST00000477983 MSMPQ1L6U9 139 aa8.35□□□□□ -1.07
LMBR1-216ENST00000477983 ZAR1Q86SH2 424 aa8.35□□□□□ -1.07
LMBR1-216ENST00000477983 FBXL6Q8N531 539 aa8.35□□□□□ -1.07
LMBR1-216ENST00000477983 GATA6Q92908 595 aa8.35□□□□□ -1.07
LMBR1-216ENST00000477983 DMRTB1Q96MA1 342 aa8.35□□□□□ -1.07
LMBR1-216ENST00000477983 METTL22Q9BUU2 404 aaPredicted RBP8.35□□□□□ -1.07
LMBR1-216ENST00000477983 ACTL7BQ9Y614 415 aa8.35□□□□□ -1.07
LMBR1-216ENST00000477983 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.34□□□□□ -1.07
LMBR1-216ENST00000477983 ECEL1O95672 775 aa8.34□□□□□ -1.07
LMBR1-216ENST00000477983 ADMP35318 185 aa8.34□□□□□ -1.07
LMBR1-216ENST00000477983 GLIS3Q8NEA6 775 aa8.34□□□□□ -1.07
LMBR1-216ENST00000477983 CORO1BQ9BR76 489 aa8.34□□□□□ -1.07
LMBR1-216ENST00000477983 ACSS3Q9H6R3 686 aa8.34□□□□□ -1.07
LMBR1-216ENST00000477983 TMEM238LA0A1B0GVL6 79 aa8.33□□□□□ -1.08
LMBR1-216ENST00000477983 AP3B2Q13367 1082 aa8.33□□□□□ -1.08
LMBR1-216ENST00000477983 MAP7Q14244 749 aa8.33□□□□□ -1.08
LMBR1-216ENST00000477983 CSRNP1Q96S65 589 aa8.33□□□□□ -1.08
LMBR1-216ENST00000477983 TRAK1Q9UPV9 953 aa8.33□□□□□ -1.08
LMBR1-216ENST00000477983 PRNPP04156 253 aa8.32□□□□□ -1.08
LMBR1-216ENST00000477983 NFICP08651 508 aa8.32□□□□□ -1.08
LMBR1-216ENST00000477983 TAL1P17542 331 aaPredicted RBP8.32□□□□□ -1.08
LMBR1-216ENST00000477983 SEZ6L2Q6UXD5 910 aa8.32□□□□□ -1.08
LMBR1-216ENST00000477983 TMC1Q8TDI8 760 aa8.32□□□□□ -1.08
LMBR1-216ENST00000477983 TBC1D32Q96NH3 1257 aa8.32□□□□□ -1.08
LMBR1-216ENST00000477983 SEMA6CQ9H3T2 930 aa8.32□□□□□ -1.08
LMBR1-216ENST00000477983 GOLGA2P5Q9HBQ8 144 aa8.32□□□□□ -1.08
LMBR1-216ENST00000477983 RAD18Q9NS91 495 aa8.32□□□□□ -1.08
LMBR1-216ENST00000477983 TIMELESSQ9UNS1 1208 aa8.32□□□□□ -1.08
LMBR1-216ENST00000477983 KRTAP4-8A0A0G2JLE6 195 aa8.31□□□□□ -1.08
LMBR1-216ENST00000477983 SOWAHDA6NJG2 315 aa8.31□□□□□ -1.08
LMBR1-216ENST00000477983 AOC2O75106 756 aa8.31□□□□□ -1.08
LMBR1-216ENST00000477983 GRM2Q14416 872 aa8.31□□□□□ -1.08
LMBR1-216ENST00000477983 AKAP4Q5JQC9 854 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 213.8 ms