RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 DHX16O60231 1041 aaKnown RBP14.35□□□□□ -0.11
PTPRF-212ENST00000477970 ADD1P35611 737 aaKnown RBP14.35□□□□□ -0.11
PTPRF-212ENST00000477970 CCDC152Q4G0S7 254 aa14.35□□□□□ -0.11
PTPRF-212ENST00000477970 TTLL5Q6EMB2 1281 aa14.35□□□□□ -0.11
PTPRF-212ENST00000477970 ZNF213O14771 459 aa14.35□□□□□ -0.11
PTPRF-212ENST00000477970 PIH1D3Q9NQM4 214 aaKnown RBP14.35□□□□□ -0.11
PTPRF-212ENST00000477970 ITPK1Q13572 414 aa14.35□□□□□ -0.11
PTPRF-212ENST00000477970 FERMT3Q86UX7 667 aa14.35□□□□□ -0.11
PTPRF-212ENST00000477970 LRRC2Q9BYS8 371 aa14.35□□□□□ -0.11
PTPRF-212ENST00000477970 RCOR1Q9UKL0 485 aa14.35□□□□□ -0.11
PTPRF-212ENST00000477970 ZNF652Q9Y2D9 606 aa14.34□□□□□ -0.11
PTPRF-212ENST00000477970 CCDC192P0DO97 292 aa14.34□□□□□ -0.11
PTPRF-212ENST00000477970 PDE6AP16499 860 aa14.34□□□□□ -0.11
PTPRF-212ENST00000477970 NUP62CLQ9H1M0 184 aa14.34□□□□□ -0.11
PTPRF-212ENST00000477970 CLSTN2Q9H4D0 955 aa14.34□□□□□ -0.11
PTPRF-212ENST00000477970 ZKSCAN5Q9Y2L8 839 aa14.34□□□□□ -0.11
PTPRF-212ENST00000477970 NID2Q14112 1375 aa14.34□□□□□ -0.11
PTPRF-212ENST00000477970 ZBTB22O15209 634 aa14.33□□□□□ -0.11
PTPRF-212ENST00000477970 PRC1O43663 620 aa14.33□□□□□ -0.11
PTPRF-212ENST00000477970 PHKA1P46020 1223 aa14.33□□□□□ -0.11
PTPRF-212ENST00000477970 ANTXR2P58335 489 aa14.33□□□□□ -0.11
PTPRF-212ENST00000477970 MAP3K11Q16584 847 aa14.33□□□□□ -0.11
PTPRF-212ENST00000477970 SLC9C2Q5TAH2 1124 aa14.33□□□□□ -0.11
PTPRF-212ENST00000477970 PI16Q6UXB8 463 aa14.33□□□□□ -0.11
PTPRF-212ENST00000477970 MSNP26038 577 aaKnown RBP14.33□□□□□ -0.12
PTPRF-212ENST00000477970 ZNF396Q96N95 335 aaPredicted RBP14.33□□□□□ -0.12
PTPRF-212ENST00000477970 NBPF3Q9H094 633 aa14.33□□□□□ -0.12
PTPRF-212ENST00000477970 ECM29Q5VYK3 1845 aa14.33□□□□□ -0.12
PTPRF-212ENST00000477970 SPATA5Q8NB90 893 aa14.33□□□□□ -0.12
PTPRF-212ENST00000477970 RNF214Q8ND24 703 aa14.33□□□□□ -0.12
PTPRF-212ENST00000477970 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.33□□□□□ -0.12
PTPRF-212ENST00000477970 CNTNAP4Q9C0A0 1308 aa14.32□□□□□ -0.12
PTPRF-212ENST00000477970 ZNF532Q9HCE3 1301 aa14.32□□□□□ -0.12
PTPRF-212ENST00000477970 RALYLQ86SE5 291 aaKnown RBP14.32□□□□□ -0.12
PTPRF-212ENST00000477970 AKT1S1Q96B36 256 aa14.32□□□□□ -0.12
PTPRF-212ENST00000477970 HPS5Q9UPZ3 1129 aa14.32□□□□□ -0.12
PTPRF-212ENST00000477970 PNPLA7Q6ZV29 1317 aa14.32□□□□□ -0.12
PTPRF-212ENST00000477970 CAVIN2O95810 425 aa14.32□□□□□ -0.12
PTPRF-212ENST00000477970 LIG1P18858 919 aa14.32□□□□□ -0.12
PTPRF-212ENST00000477970 PGBD1Q96JS3 809 aa14.32□□□□□ -0.12
PTPRF-212ENST00000477970 STRBPQ96SI9 672 aaKnown RBP14.32□□□□□ -0.12
PTPRF-212ENST00000477970 CDC5LQ99459 802 aaKnown RBP14.32□□□□□ -0.12
PTPRF-212ENST00000477970 MTA3Q9BTC8 594 aa14.32□□□□□ -0.12
PTPRF-212ENST00000477970 KDM4AO75164 1064 aa14.31□□□□□ -0.12
PTPRF-212ENST00000477970 FDPSP14324 419 aaKnown RBP14.31□□□□□ -0.12
PTPRF-212ENST00000477970 FAM173BQ6P4H8 233 aa14.31□□□□□ -0.12
PTPRF-212ENST00000477970 GIMAP6Q6P9H5 292 aa14.31□□□□□ -0.12
PTPRF-212ENST00000477970 DDX11Q96FC9 970 aa14.31□□□□□ -0.12
PTPRF-212ENST00000477970 GOLGA6L4A6NEF3 574 aa14.31□□□□□ -0.12
PTPRF-212ENST00000477970 GNAT2P19087 354 aa14.31□□□□□ -0.12
PTPRF-212ENST00000477970 IGHMBP2P38935 993 aaKnown RBP14.31□□□□□ -0.12
PTPRF-212ENST00000477970 TMEM87BQ96K49 555 aa14.31□□□□□ -0.12
PTPRF-212ENST00000477970 MPHOSPH8Q99549 860 aa14.31□□□□□ -0.12
PTPRF-212ENST00000477970 LRRC4BQ9NT99 713 aa14.31□□□□□ -0.12
PTPRF-212ENST00000477970 HCLS1P14317 486 aaPredicted RBP14.31□□□□□ -0.12
PTPRF-212ENST00000477970 MAP3K12Q12852 859 aa14.31□□□□□ -0.12
PTPRF-212ENST00000477970 PATL2C9JE40 543 aaKnown RBP14.3□□□□□ -0.12
PTPRF-212ENST00000477970 SF3B3Q15393 1217 aaKnown RBP14.3□□□□□ -0.12
PTPRF-212ENST00000477970 ZNF804BA4D1E1 1349 aa14.3□□□□□ -0.12
PTPRF-212ENST00000477970 CTAGE5O15320 804 aa14.3□□□□□ -0.12
PTPRF-212ENST00000477970 DTNBO60941 627 aa14.3□□□□□ -0.12
PTPRF-212ENST00000477970 CCT2P78371 535 aaKnown RBP14.3□□□□□ -0.12
PTPRF-212ENST00000477970 TRDNQ13061 729 aa14.3□□□□□ -0.12
PTPRF-212ENST00000477970 SLC15A2Q16348 729 aa14.3□□□□□ -0.12
PTPRF-212ENST00000477970 ANO8Q9HCE9 1232 aaPredicted RBP14.3□□□□□ -0.12
PTPRF-212ENST00000477970 STK32BQ9NY57 414 aa14.3□□□□□ -0.12
PTPRF-212ENST00000477970 KIAA1551Q9HCM1 1747 aa14.3□□□□□ -0.12
PTPRF-212ENST00000477970 SH2B2O14492 632 aaPredicted RBP14.3□□□□□ -0.12
PTPRF-212ENST00000477970 RASGRF1Q13972 1273 aa14.3□□□□□ -0.12
PTPRF-212ENST00000477970 FAM200AQ8TCP9 573 aa14.3□□□□□ -0.12
PTPRF-212ENST00000477970 DACT1Q9NYF0 836 aa14.3□□□□□ -0.12
PTPRF-212ENST00000477970 TFIP11Q9UBB9 837 aaKnown RBP14.3□□□□□ -0.12
PTPRF-212ENST00000477970 WWC3Q9ULE0 1092 aa14.3□□□□□ -0.12
PTPRF-212ENST00000477970 ANGEL1Q9UNK9 670 aaKnown RBP14.3□□□□□ -0.12
PTPRF-212ENST00000477970 KLF18A0A0U1RQI7 1052 aa14.29□□□□□ -0.12
PTPRF-212ENST00000477970 TERF1P54274 439 aa14.29□□□□□ -0.12
PTPRF-212ENST00000477970 BRAPQ7Z569 592 aa14.29□□□□□ -0.12
PTPRF-212ENST00000477970 SGMS1Q86VZ5 419 aa14.29□□□□□ -0.12
PTPRF-212ENST00000477970 TNMDQ9H2S6 317 aa14.29□□□□□ -0.12
PTPRF-212ENST00000477970 RTEL1Q9NZ71 1219 aa14.29□□□□□ -0.12
PTPRF-212ENST00000477970 NIP7Q9Y221 180 aaKnown RBP eCLIP14.29□□□□□ -0.129e-8■□□□□ 8.2
PTPRF-212ENST00000477970 MAST2Q6P0Q8 1798 aa14.29□□□□□ -0.12
PTPRF-212ENST00000477970 IDH1O75874 414 aaKnown RBP14.29□□□□□ -0.12
PTPRF-212ENST00000477970 HAND2P61296 217 aa14.29□□□□□ -0.12
PTPRF-212ENST00000477970 SLC10A5Q5PT55 438 aa14.29□□□□□ -0.12
PTPRF-212ENST00000477970 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
PTPRF-212ENST00000477970 NCOA5Q9HCD5 579 aaKnown RBP14.29□□□□□ -0.12
PTPRF-212ENST00000477970 USP25Q9UHP3 1055 aa14.29□□□□□ -0.12
PTPRF-212ENST00000477970 MRVI1Q9Y6F6 885 aa14.29□□□□□ -0.12
PTPRF-212ENST00000477970 OFD1O75665 1012 aa14.28□□□□□ -0.12
PTPRF-212ENST00000477970 TYRO3Q06418 890 aa14.28□□□□□ -0.12
PTPRF-212ENST00000477970 RC3H1Q5TC82 1133 aaKnown RBP14.28□□□□□ -0.12
PTPRF-212ENST00000477970 AIDAQ96BJ3 306 aa14.28□□□□□ -0.12
PTPRF-212ENST00000477970 CNNM2Q9H8M5 875 aa14.28□□□□□ -0.12
PTPRF-212ENST00000477970 COL4A1P02462 1669 aa14.28□□□□□ -0.12
PTPRF-212ENST00000477970 GOLGA8BA8MQT2 603 aa14.28□□□□□ -0.12
PTPRF-212ENST00000477970 CDKL5O76039 1030 aa14.28□□□□□ -0.12
PTPRF-212ENST00000477970 LIFRP42702 1097 aa14.28□□□□□ -0.12
PTPRF-212ENST00000477970 CHST3Q7LGC8 479 aa14.28□□□□□ -0.12
PTPRF-212ENST00000477970 CCNL1Q9UK58 526 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms