RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 RHBDD1Q8TEB9 315 aa9.32□□□□□ -0.92
USP33-208ENST00000477949 EDARADDQ8WWZ3 215 aa9.32□□□□□ -0.92
USP33-208ENST00000477949 ABHD8Q96I13 439 aa9.32□□□□□ -0.92
USP33-208ENST00000477949 MKL2Q9ULH7 1088 aa9.32□□□□□ -0.92
USP33-208ENST00000477949 ATXN7L1Q9ULK2 861 aaPredicted RBP9.32□□□□□ -0.92
USP33-208ENST00000477949 DOLKQ9UPQ8 538 aa9.32□□□□□ -0.92
USP33-208ENST00000477949 VIRMAQ69YN4 1812 aaKnown RBP9.32□□□□□ -0.92
USP33-208ENST00000477949 SHISA8B8ZZ34 492 aa9.31□□□□□ -0.92
USP33-208ENST00000477949 C1orf229Q6ZS94 237 aaPredicted RBP9.31□□□□□ -0.92
USP33-208ENST00000477949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.31□□□□□ -0.92
USP33-208ENST00000477949 GOLGA6L1Q8N7Z2 621 aa9.31□□□□□ -0.92
USP33-208ENST00000477949 TBC1D2BQ9UPU7 963 aa9.31□□□□□ -0.92
USP33-208ENST00000477949 RAB3GAP2Q9H2M9 1393 aa9.31□□□□□ -0.92
USP33-208ENST00000477949 TIAM2Q8IVF5 1701 aa9.31□□□□□ -0.92
USP33-208ENST00000477949 CUL9Q8IWT3 2517 aa9.3□□□□□ -0.92
USP33-208ENST00000477949 CNTNAP1P78357 1384 aa9.3□□□□□ -0.92
USP33-208ENST00000477949 BMP4P12644 408 aa9.3□□□□□ -0.92
USP33-208ENST00000477949 ITPK1Q13572 414 aa9.3□□□□□ -0.92
USP33-208ENST00000477949 RNF135Q8IUD6 432 aa9.3□□□□□ -0.92
USP33-208ENST00000477949 ETNK1Q9HBU6 452 aa9.3□□□□□ -0.92
USP33-208ENST00000477949 EDC4Q6P2E9 1401 aaKnown RBP9.3□□□□□ -0.92
USP33-208ENST00000477949 MAP3K19Q56UN5 1328 aa9.3□□□□□ -0.92
USP33-208ENST00000477949 CYP27B1O15528 508 aa9.29□□□□□ -0.92
USP33-208ENST00000477949 ADAM23O75077 832 aa9.29□□□□□ -0.92
USP33-208ENST00000477949 HMGB2P26583 209 aaKnown RBP9.29□□□□□ -0.92
USP33-208ENST00000477949 ALYREFQ86V81 257 aaKnown RBP9.29□□□□□ -0.92
USP33-208ENST00000477949 LTV1Q96GA3 475 aaPredicted RBP9.29□□□□□ -0.92
USP33-208ENST00000477949 CRISPLD1Q9H336 500 aa9.29□□□□□ -0.92
USP33-208ENST00000477949 NDFIP2Q9NV92 336 aa9.29□□□□□ -0.92
USP33-208ENST00000477949 MKRN1Q9UHC7 482 aaKnown RBP9.29□□□□□ -0.92
USP33-208ENST00000477949 CGNL1Q0VF96 1302 aa9.29□□□□□ -0.92
USP33-208ENST00000477949 KDRP35968 1356 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 LOC102724428A0A0B4J2F2 783 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 GLTPD2A6NH11 291 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 C2CD2LO14523 706 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 BNIP3LO60238 219 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 PROCP04070 461 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 VEGFAP15692 232 aaPredicted RBP9.28□□□□□ -0.92
USP33-208ENST00000477949 HOXC9P31274 260 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 CTCFP49711 727 aaPredicted RBP9.28□□□□□ -0.92
USP33-208ENST00000477949 SIK1P57059 783 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 CTBSQ01459 385 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 IRF5Q13568 498 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 TLR1Q15399 786 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 NBPF6Q5VWK0 638 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 MPRIPQ6WCQ1 1025 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 PIGBQ92521 554 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 SMARCC1Q92922 1105 aaPredicted RBP9.28□□□□□ -0.92
USP33-208ENST00000477949 ABHD17AQ96GS6 310 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 NBPF4Q96M43 638 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 ZNF831Q5JPB2 1677 aa9.28□□□□□ -0.92
USP33-208ENST00000477949 COL5A3P25940 1745 aaPredicted RBP9.28□□□□□ -0.92
USP33-208ENST00000477949 KRBA1A5PL33 1030 aa9.27□□□□□ -0.93
USP33-208ENST00000477949 STAU1O95793 577 aaKnown RBP9.27□□□□□ -0.93
USP33-208ENST00000477949 GYS1P13807 737 aa9.27□□□□□ -0.93
USP33-208ENST00000477949 FGFR3P22607 806 aa9.27□□□□□ -0.93
USP33-208ENST00000477949 LBX1P52954 281 aa9.27□□□□□ -0.93
USP33-208ENST00000477949 OXLD1Q5BKU9 147 aa9.27□□□□□ -0.93
USP33-208ENST00000477949 PCDH11XQ9BZA7 1347 aa9.27□□□□□ -0.93
USP33-208ENST00000477949 PCDH11YQ9BZA8 1340 aa9.27□□□□□ -0.93
USP33-208ENST00000477949 SLC24A1O60721 1099 aa9.26□□□□□ -0.93
USP33-208ENST00000477949 HSPA8P11142 646 aaKnown RBP9.26□□□□□ -0.93
USP33-208ENST00000477949 FBLN1P23142 703 aa9.26□□□□□ -0.93
USP33-208ENST00000477949 FIGNL1Q6PIW4 674 aa9.26□□□□□ -0.93
USP33-208ENST00000477949 TBC1D9Q6ZT07 1266 aa9.26□□□□□ -0.93
USP33-208ENST00000477949 NLGN1Q8N2Q7 840 aa9.26□□□□□ -0.93
USP33-208ENST00000477949 USHBP1Q8N6Y0 703 aa9.26□□□□□ -0.93
USP33-208ENST00000477949 CCDC87Q9NVE4 849 aa9.26□□□□□ -0.93
USP33-208ENST00000477949 PIM2Q9P1W9 311 aa9.26□□□□□ -0.93
USP33-208ENST00000477949 MYH14Q7Z406 1995 aaKnown RBP9.26□□□□□ -0.93
USP33-208ENST00000477949 ADAMTS7Q9UKP4 1686 aa9.26□□□□□ -0.93
USP33-208ENST00000477949 CCDC88AQ3V6T2 1871 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 A0A1W2PP64 1363 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 RTL1A6NKG5 1358 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 DLEC1Q9Y238 1755 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 NCAPD2Q15021 1401 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 THSD7BQ9C0I4 1608 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 INHAP05111 366 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 TMF1P82094 1093 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 MAP7D1Q3KQU3 841 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 DALRD3Q5D0E6 543 aaKnown RBP9.25□□□□□ -0.93
USP33-208ENST00000477949 C1orf216Q8TAB5 229 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 SLC4A9Q96Q91 983 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 ZCCHC2Q9C0B9 1178 aaKnown RBP9.25□□□□□ -0.93
USP33-208ENST00000477949 GGA1Q9UJY5 639 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 PCDHGC4Q9Y5F7 938 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 PASKQ96RG2 1323 aa9.25□□□□□ -0.93
USP33-208ENST00000477949 PIK3R2O00459 728 aa9.24□□□□□ -0.93
USP33-208ENST00000477949 AMPD1P23109 780 aa9.24□□□□□ -0.93
USP33-208ENST00000477949 COL8A1P27658 744 aa9.24□□□□□ -0.93
USP33-208ENST00000477949 CHRNA5P30532 468 aa9.24□□□□□ -0.93
USP33-208ENST00000477949 PLA2G4AP47712 749 aa9.24□□□□□ -0.93
USP33-208ENST00000477949 GDF10P55107 478 aa9.24□□□□□ -0.93
USP33-208ENST00000477949 LINC00114Q6XXX2 140 aa9.24□□□□□ -0.93
USP33-208ENST00000477949 SLCO4C1Q6ZQN7 724 aa9.24□□□□□ -0.93
USP33-208ENST00000477949 NLRP8Q86W28 1048 aa9.24□□□□□ -0.93
USP33-208ENST00000477949 BTBD6Q96KE9 485 aa9.24□□□□□ -0.93
USP33-208ENST00000477949 NIFKQ9BYG3 293 aaKnown RBP9.24□□□□□ -0.93
USP33-208ENST00000477949 NFKBIEO00221 500 aa9.23□□□□□ -0.93
USP33-208ENST00000477949 SCNN1DP51172 638 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms