RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 OTUD7BQ6GQQ9 843 aa14.79□□□□□ -0.04
CPSF7-211ENST00000477890 MRPL50Q8N5N7 158 aaKnown RBP14.79□□□□□ -0.04
CPSF7-211ENST00000477890 ZNF521Q96K83 1311 aa14.79□□□□□ -0.04
CPSF7-211ENST00000477890 ELP3Q9H9T3 547 aa14.79□□□□□ -0.04
CPSF7-211ENST00000477890 TRIM17Q9Y577 477 aa14.79□□□□□ -0.04
CPSF7-211ENST00000477890 TNNI2P48788 182 aa14.78□□□□□ -0.04
CPSF7-211ENST00000477890 GRIK5Q16478 980 aa14.78□□□□□ -0.04
CPSF7-211ENST00000477890 CAVIN4Q5BKX8 364 aa14.78□□□□□ -0.04
CPSF7-211ENST00000477890 FBXO33Q7Z6M2 555 aa14.78□□□□□ -0.04
CPSF7-211ENST00000477890 CDAN1Q8IWY9 1227 aa14.78□□□□□ -0.04
CPSF7-211ENST00000477890 ANKRD44Q8N8A2 993 aa14.78□□□□□ -0.04
CPSF7-211ENST00000477890 OPTNQ96CV9 577 aa14.78□□□□□ -0.04
CPSF7-211ENST00000477890 PTPRCP08575 1304 aa14.77□□□□□ -0.04
CPSF7-211ENST00000477890 PDE8BO95263 885 aa14.77□□□□□ -0.05
CPSF7-211ENST00000477890 CRHR2Q13324 411 aa14.77□□□□□ -0.05
CPSF7-211ENST00000477890 OTOP1Q7RTM1 612 aa14.77□□□□□ -0.05
CPSF7-211ENST00000477890 KLHDC4Q8TBB5 520 aa14.77□□□□□ -0.05
CPSF7-211ENST00000477890 TBC1D22AQ8WUA7 517 aa14.77□□□□□ -0.05
CPSF7-211ENST00000477890 ERO1AQ96HE7 468 aa14.77□□□□□ -0.05
CPSF7-211ENST00000477890 TEPSINQ96N21 525 aa14.77□□□□□ -0.05
CPSF7-211ENST00000477890 TMEM39BQ9GZU3 492 aa14.77□□□□□ -0.05
CPSF7-211ENST00000477890 VGLL2Q8N8G2 317 aa14.76□□□□□ -0.05
CPSF7-211ENST00000477890 CD99L2Q8TCZ2 262 aa14.76□□□□□ -0.05
CPSF7-211ENST00000477890 PTPN18Q99952 460 aa14.76□□□□□ -0.05
CPSF7-211ENST00000477890 TESPA1A2RU30 521 aaPredicted RBP14.75□□□□□ -0.05
CPSF7-211ENST00000477890 BCAMP50895 628 aa14.75□□□□□ -0.05
CPSF7-211ENST00000477890 CACNB3P54284 484 aa14.75□□□□□ -0.05
CPSF7-211ENST00000477890 MAP3K9P80192 1104 aa14.75□□□□□ -0.05
CPSF7-211ENST00000477890 HDLBPQ00341 1268 aaKnown RBP14.75□□□□□ -0.05
CPSF7-211ENST00000477890 PRPF38BQ5VTL8 546 aaKnown RBP14.75□□□□□ -0.05
CPSF7-211ENST00000477890 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.75□□□□□ -0.05
CPSF7-211ENST00000477890 CNKSR2Q8WXI2 1034 aa14.75□□□□□ -0.05
CPSF7-211ENST00000477890 SSH1Q8WYL5 1049 aa14.75□□□□□ -0.05
CPSF7-211ENST00000477890 TEKT1Q969V4 418 aa14.75□□□□□ -0.05
CPSF7-211ENST00000477890 MYH13Q9UKX3 1938 aa14.74□□□□□ -0.05
CPSF7-211ENST00000477890 E9PSI1 815 aa14.74□□□□□ -0.05
CPSF7-211ENST00000477890 VGLL4Q14135 290 aa14.74□□□□□ -0.05
CPSF7-211ENST00000477890 MS4A4AQ96JQ5 239 aa14.74□□□□□ -0.05
CPSF7-211ENST00000477890 USP44Q9H0E7 712 aa14.74□□□□□ -0.05
CPSF7-211ENST00000477890 CSADQ9Y600 493 aa14.74□□□□□ -0.05
CPSF7-211ENST00000477890 CCL15-CCL14A0A0B4J2E2 113 aa14.73□□□□□ -0.05
CPSF7-211ENST00000477890 IFIT1P09914 478 aaKnown RBP14.73□□□□□ -0.05
CPSF7-211ENST00000477890 GTF2A2P52657 109 aa14.73□□□□□ -0.05
CPSF7-211ENST00000477890 SP3Q02447 781 aa14.73□□□□□ -0.05
CPSF7-211ENST00000477890 PUM3Q15397 648 aaKnown RBP14.73□□□□□ -0.05
CPSF7-211ENST00000477890 CCL15Q16663 113 aa14.73□□□□□ -0.05
CPSF7-211ENST00000477890 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.73□□□□□ -0.05
CPSF7-211ENST00000477890 OTUD5Q96G74 571 aa14.73□□□□□ -0.05
CPSF7-211ENST00000477890 EFCC1Q9HA90 598 aa14.73□□□□□ -0.05
CPSF7-211ENST00000477890 TMOD2Q9NZR1 351 aa14.73□□□□□ -0.05
CPSF7-211ENST00000477890 PTPN22Q9Y2R2 807 aa14.73□□□□□ -0.05
CPSF7-211ENST00000477890 MAST3O60307 1309 aa14.72□□□□□ -0.05
CPSF7-211ENST00000477890 TAF1CQ15572 869 aaPredicted RBP14.72□□□□□ -0.05
CPSF7-211ENST00000477890 INTS3Q68E01 1043 aaKnown RBP14.72□□□□□ -0.05
CPSF7-211ENST00000477890 BRI3BPQ8WY22 251 aa14.72□□□□□ -0.05
CPSF7-211ENST00000477890 ZDHHC15Q96MV8 337 aa14.72□□□□□ -0.05
CPSF7-211ENST00000477890 KIF16BQ96L93 1317 aa14.71□□□□□ -0.05
CPSF7-211ENST00000477890 EYA2O00167 538 aa14.71□□□□□ -0.05
CPSF7-211ENST00000477890 FGFR2P21802 821 aa14.71□□□□□ -0.05
CPSF7-211ENST00000477890 SLFN5Q08AF3 891 aa14.71□□□□□ -0.05
CPSF7-211ENST00000477890 APOBEC3HQ6NTF7 200 aaKnown RBP14.71□□□□□ -0.05
CPSF7-211ENST00000477890 MRIQ9BWK5 157 aa14.71□□□□□ -0.05
CPSF7-211ENST00000477890 ZFYVE28Q9HCC9 887 aa14.71□□□□□ -0.05
CPSF7-211ENST00000477890 SUGT1Q9Y2Z0 365 aa14.71□□□□□ -0.05
CPSF7-211ENST00000477890 POTEFA5A3E0 1075 aa14.7□□□□□ -0.06
CPSF7-211ENST00000477890 SPDYE5A6NIY4 337 aa14.7□□□□□ -0.06
CPSF7-211ENST00000477890 SLC5A1P13866 664 aa14.7□□□□□ -0.06
CPSF7-211ENST00000477890 RFX5P48382 616 aaPredicted RBP14.7□□□□□ -0.06
CPSF7-211ENST00000477890 CAP1Q01518 475 aa14.7□□□□□ -0.06
CPSF7-211ENST00000477890 FAM83AQ86UY5 434 aa14.7□□□□□ -0.06
CPSF7-211ENST00000477890 FAM43AQ8N2R8 423 aa14.7□□□□□ -0.06
CPSF7-211ENST00000477890 WRNIP1Q96S55 665 aa14.7□□□□□ -0.06
CPSF7-211ENST00000477890 SNCAIPQ9Y6H5 919 aa14.7□□□□□ -0.06
CPSF7-211ENST00000477890 RBBP6Q7Z6E9 1792 aaKnown RBP14.7□□□□□ -0.06
CPSF7-211ENST00000477890 AK9Q5TCS8 1911 aa14.69□□□□□ -0.06
CPSF7-211ENST00000477890 ALDH1L2Q3SY69 923 aa14.69□□□□□ -0.06
CPSF7-211ENST00000477890 FKBP1CQ5VVH2 108 aa14.69□□□□□ -0.06
CPSF7-211ENST00000477890 HHIPL2Q6UWX4 724 aa14.69□□□□□ -0.06
CPSF7-211ENST00000477890 ERO1BQ86YB8 467 aa14.69□□□□□ -0.06
CPSF7-211ENST00000477890 WDR66Q8TBY9 1149 aa14.69□□□□□ -0.06
CPSF7-211ENST00000477890 LPIN2Q92539 896 aa14.69□□□□□ -0.06
CPSF7-211ENST00000477890 ZKSCAN4Q969J2 545 aaPredicted RBP14.69□□□□□ -0.06
CPSF7-211ENST00000477890 HOOK2Q96ED9 719 aa14.69□□□□□ -0.06
CPSF7-211ENST00000477890 SMC4Q9NTJ3 1288 aa14.69□□□□□ -0.06
CPSF7-211ENST00000477890 KIAA0100Q14667 2235 aaKnown RBP14.68□□□□□ -0.06
CPSF7-211ENST00000477890 CETPP11597 493 aa14.68□□□□□ -0.06
CPSF7-211ENST00000477890 ARHGEF6Q15052 776 aa14.68□□□□□ -0.06
CPSF7-211ENST00000477890 DCAF15Q66K64 600 aa14.68□□□□□ -0.06
CPSF7-211ENST00000477890 ATG9AQ7Z3C6 839 aa14.68□□□□□ -0.06
CPSF7-211ENST00000477890 ARMC5Q96C12 935 aa14.68□□□□□ -0.06
CPSF7-211ENST00000477890 CDCA7LQ96GN5 454 aa14.68□□□□□ -0.06
CPSF7-211ENST00000477890 SIL1Q9H173 461 aa14.68□□□□□ -0.06
CPSF7-211ENST00000477890 HTTP42858 3142 aa14.67□□□□□ -0.06
CPSF7-211ENST00000477890 IRF6O14896 467 aa14.67□□□□□ -0.06
CPSF7-211ENST00000477890 WDHD1O75717 1129 aaPredicted RBP14.67□□□□□ -0.06
CPSF7-211ENST00000477890 UBTFL1P0CB47 393 aaPredicted RBP14.67□□□□□ -0.06
CPSF7-211ENST00000477890 MIGA2Q7L4E1 593 aa14.67□□□□□ -0.06
CPSF7-211ENST00000477890 ZNF341Q9BYN7 854 aa14.67□□□□□ -0.06
CPSF7-211ENST00000477890 RPAP1Q9BWH6 1393 aaPredicted RBP14.67□□□□□ -0.06
CPSF7-211ENST00000477890 BTBD19C9JJ37 291 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms