RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 RPGRQ92834 1020 aaKnown RBP12.68□□□□□ -0.38
COL27A1-204ENST00000477421 DSCC1Q9BVC3 393 aa12.68□□□□□ -0.38
COL27A1-204ENST00000477421 CTSWP56202 376 aa12.68□□□□□ -0.38
COL27A1-204ENST00000477421 MTX1Q13505 466 aa12.68□□□□□ -0.38
COL27A1-204ENST00000477421 FAM98CQ17RN3 349 aaKnown RBP12.68□□□□□ -0.38
COL27A1-204ENST00000477421 PPP4R3BQ5MIZ7 849 aa12.68□□□□□ -0.38
COL27A1-204ENST00000477421 CEP135Q66GS9 1140 aa12.68□□□□□ -0.38
COL27A1-204ENST00000477421 PLIN2Q99541 437 aa12.68□□□□□ -0.38
COL27A1-204ENST00000477421 PDCL3Q9H2J4 239 aa12.68□□□□□ -0.38
COL27A1-204ENST00000477421 CNNM2Q9H8M5 875 aa12.68□□□□□ -0.38
COL27A1-204ENST00000477421 PDIA3P30101 505 aaKnown RBP12.68□□□□□ -0.38
COL27A1-204ENST00000477421 ARHGAP29Q52LW3 1261 aa12.68□□□□□ -0.38
COL27A1-204ENST00000477421 ANO1Q5XXA6 986 aa12.68□□□□□ -0.38
COL27A1-204ENST00000477421 ZBTB38Q8NAP3 1195 aaPredicted RBP12.68□□□□□ -0.38
COL27A1-204ENST00000477421 SDR42E1Q8WUS8 393 aa12.68□□□□□ -0.38
COL27A1-204ENST00000477421 PUS7LQ9H0K6 701 aaKnown RBP12.68□□□□□ -0.38
COL27A1-204ENST00000477421 SEC31BQ9NQW1 1179 aa12.68□□□□□ -0.38
COL27A1-204ENST00000477421 GYG1P46976 350 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 KRT40Q6A162 431 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 SPATA5Q8NB90 893 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 CAGE1Q8TC20 777 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 PIGBQ92521 554 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 LPIN2Q92539 896 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 KAT14Q9H8E8 782 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 NBPF26B4DH59 902 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 M0R2C6 588 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 CAVIN2O95810 425 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 EIF5P55010 431 aaKnown RBP12.67□□□□□ -0.38
COL27A1-204ENST00000477421 SNW1Q13573 536 aaKnown RBP12.67□□□□□ -0.38
COL27A1-204ENST00000477421 NBPF14Q5TI25 921 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 NBPF10Q6P3W6 841 aaKnown RBP12.67□□□□□ -0.38
COL27A1-204ENST00000477421 NBPF15Q8N660 670 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 STAMQ92783 540 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 PPP1R1BQ9UD71 204 aaPredicted RBP12.67□□□□□ -0.38
COL27A1-204ENST00000477421 DEPDC5O75140 1603 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 GNPATO15228 680 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 PDE6AP16499 860 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 PDE4BQ07343 736 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 STIM1Q13586 685 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 HLFQ16534 295 aa12.67□□□□□ -0.38
COL27A1-204ENST00000477421 DIS3L2Q8IYB7 885 aaKnown RBP12.67□□□□□ -0.38
COL27A1-204ENST00000477421 LLPHQ9BRT6 129 aaKnown RBP12.67□□□□□ -0.38
COL27A1-204ENST00000477421 CRNKL1Q9BZJ0 848 aaKnown RBP12.67□□□□□ -0.38
COL27A1-204ENST00000477421 WDR17Q8IZU2 1322 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 ZNF335Q9H4Z2 1342 aaPredicted RBP12.66□□□□□ -0.38
COL27A1-204ENST00000477421 EPS15P42566 896 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 AK7Q96M32 723 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 AIFM3Q96NN9 605 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 V9GY48 417 aaPredicted RBP12.66□□□□□ -0.38
COL27A1-204ENST00000477421 DYNC1I1O14576 645 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 ZNF202O95125 648 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 ENOX2Q16206 610 aaKnown RBP12.66□□□□□ -0.38
COL27A1-204ENST00000477421 ZMYM1Q5SVZ6 1142 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 BRINP3Q76B58 766 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 NRBP1Q9UHY1 535 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 WWC3Q9ULE0 1092 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 MAP2P11137 1827 aaKnown RBP12.66□□□□□ -0.38
COL27A1-204ENST00000477421 IDEP14735 1019 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 UBA7P41226 1012 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 TRMT1LQ7Z2T5 733 aaKnown RBP12.66□□□□□ -0.38
COL27A1-204ENST00000477421 TTC14Q96N46 770 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 DNAI1Q9UI46 699 aa12.66□□□□□ -0.38
COL27A1-204ENST00000477421 TRIM75PA6NK02 468 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 PFKFB2O60825 505 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 PCCAP05165 728 aaPredicted RBP12.65□□□□□ -0.38
COL27A1-204ENST00000477421 TEX35Q5T0J7 233 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.38
COL27A1-204ENST00000477421 BRAPQ7Z569 592 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 CDC42BPGQ6DT37 1551 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 UBAP1LF5GYI3 381 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 CCP110O43303 1012 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 GSDMDP57764 484 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 ZNF174Q15697 407 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 PRIMPOLQ96LW4 560 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 INCENPQ9NQS7 918 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 AATFQ9NY61 560 aaKnown RBP eCLIP12.65□□□□□ -0.38
COL27A1-204ENST00000477421 SEC63Q9UGP8 760 aaKnown RBP12.65□□□□□ -0.38
COL27A1-204ENST00000477421 PPLO60437 1756 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 ANKARQ7Z5J8 1434 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 TOB2Q14106 344 aaPredicted RBP12.65□□□□□ -0.38
COL27A1-204ENST00000477421 MYSM1Q5VVJ2 828 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 HEATR3Q7Z4Q2 680 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 TMTC2Q8N394 836 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 NSUN7Q8NE18 718 aaKnown RBP12.65□□□□□ -0.38
COL27A1-204ENST00000477421 MAPK8IP1Q9UQF2 711 aa12.65□□□□□ -0.38
COL27A1-204ENST00000477421 CEP170BQ9Y4F5 1589 aaPredicted RBP12.65□□□□□ -0.39
COL27A1-204ENST00000477421 MYOM1P52179 1685 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 PDE8BO95263 885 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 MCM7P33993 719 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 GNG11P61952 73 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 PICALMQ13492 652 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 PTPN21Q16825 1174 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 TCEAL9Q9UHQ7 104 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 HEG1Q9ULI3 1381 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 ZNF75DP51815 510 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 CCDC96Q2M329 555 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 TPTE2Q6XPS3 522 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 CARD10Q9BWT7 1032 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 DEF6Q9H4E7 631 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms