RNA–Protein interactions for RNA: ENST00000477306.1

HDGF-207, Transcript of heparin binding growth factor, humanhuman

TSL 2

Gene HDGF, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-207ENST00000477306 OPTNQ96CV9 577 aa18.27■□□□□ 0.52
HDGF-207ENST00000477306 ARAP2Q8WZ64 1704 aa18.26■□□□□ 0.51
HDGF-207ENST00000477306 TESPA1A2RU30 521 aaPredicted RBP18.26■□□□□ 0.51
HDGF-207ENST00000477306 POTEFA5A3E0 1075 aa18.26■□□□□ 0.51
HDGF-207ENST00000477306 CRKP46108 304 aa18.26■□□□□ 0.51
HDGF-207ENST00000477306 KAZALD1Q96I82 304 aa18.26■□□□□ 0.51
HDGF-207ENST00000477306 TEPSINQ96N21 525 aa18.26■□□□□ 0.51
HDGF-207ENST00000477306 TMEM39BQ9GZU3 492 aa18.26■□□□□ 0.51
HDGF-207ENST00000477306 IQSEC3Q9UPP2 1182 aaPredicted RBP18.26■□□□□ 0.51
HDGF-207ENST00000477306 PTPN22Q9Y2R2 807 aa18.26■□□□□ 0.51
HDGF-207ENST00000477306 NBPF7P0C2Y1 421 aaPredicted RBP18.25■□□□□ 0.51
HDGF-207ENST00000477306 SP3Q02447 781 aa18.25■□□□□ 0.51
HDGF-207ENST00000477306 GRIK5Q16478 980 aa18.25■□□□□ 0.51
HDGF-207ENST00000477306 INTS3Q68E01 1043 aaKnown RBP18.25■□□□□ 0.51
HDGF-207ENST00000477306 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.25■□□□□ 0.51
HDGF-207ENST00000477306 CNKSR2Q8WXI2 1034 aa18.25■□□□□ 0.51
HDGF-207ENST00000477306 EFCC1Q9HA90 598 aa18.25■□□□□ 0.51
HDGF-207ENST00000477306 RIPOR2Q9Y4F9 1068 aa18.25■□□□□ 0.51
HDGF-207ENST00000477306 MROH5Q6ZUA9 1318 aa18.24■□□□□ 0.51
HDGF-207ENST00000477306 CAP1Q01518 475 aa18.24■□□□□ 0.51
HDGF-207ENST00000477306 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
HDGF-207ENST00000477306 VPS37DQ86XT2 251 aa18.24■□□□□ 0.51
HDGF-207ENST00000477306 MRPL50Q8N5N7 158 aaKnown RBP18.24■□□□□ 0.51
HDGF-207ENST00000477306 MS4A4AQ96JQ5 239 aa18.24■□□□□ 0.51
HDGF-207ENST00000477306 HTTP42858 3142 aa18.23■□□□□ 0.51
HDGF-207ENST00000477306 TNNI2P48788 182 aa18.23■□□□□ 0.51
HDGF-207ENST00000477306 VGLL4Q14135 290 aa18.23■□□□□ 0.51
HDGF-207ENST00000477306 RABL6Q3YEC7 729 aaPredicted RBP18.23■□□□□ 0.51
HDGF-207ENST00000477306 FBXO33Q7Z6M2 555 aa18.23■□□□□ 0.51
HDGF-207ENST00000477306 BRI3BPQ8WY22 251 aa18.23■□□□□ 0.51
HDGF-207ENST00000477306 BICC1Q9H694 974 aaKnown RBP18.23■□□□□ 0.51
HDGF-207ENST00000477306 CCL15-CCL14A0A0B4J2E2 113 aa18.22■□□□□ 0.51
HDGF-207ENST00000477306 FRAT2O75474 233 aaPredicted RBP18.22■□□□□ 0.51
HDGF-207ENST00000477306 CACNB3P54284 484 aa18.22■□□□□ 0.51
HDGF-207ENST00000477306 MAP3K9P80192 1104 aa18.22■□□□□ 0.51
HDGF-207ENST00000477306 SLFN5Q08AF3 891 aa18.22■□□□□ 0.51
HDGF-207ENST00000477306 CCL15Q16663 113 aa18.22■□□□□ 0.51
HDGF-207ENST00000477306 LRRC24Q50LG9 513 aa18.22■□□□□ 0.51
HDGF-207ENST00000477306 METTL24Q5JXM2 366 aa18.22■□□□□ 0.51
HDGF-207ENST00000477306 GTF2A2P52657 109 aa18.21■□□□□ 0.51
HDGF-207ENST00000477306 TAF1CQ15572 869 aaPredicted RBP18.21■□□□□ 0.51
HDGF-207ENST00000477306 ALDH1L2Q3SY69 923 aa18.21■□□□□ 0.51
HDGF-207ENST00000477306 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.21■□□□□ 0.511e-10■□□□□ 8.2
HDGF-207ENST00000477306 ARMC5Q96C12 935 aa18.21■□□□□ 0.51
HDGF-207ENST00000477306 OTUD5Q96G74 571 aa18.21■□□□□ 0.51
HDGF-207ENST00000477306 CSADQ9Y600 493 aa18.21■□□□□ 0.51
HDGF-207ENST00000477306 CT47B1P0C2W7 299 aaPredicted RBP18.2■□□□□ 0.5
HDGF-207ENST00000477306 CAVIN4Q5BKX8 364 aa18.2■□□□□ 0.5
HDGF-207ENST00000477306 ANKRD44Q8N8A2 993 aa18.2■□□□□ 0.5
HDGF-207ENST00000477306 TBC1D22AQ8WUA7 517 aa18.2■□□□□ 0.5
HDGF-207ENST00000477306 SSH1Q8WYL5 1049 aa18.2■□□□□ 0.5
HDGF-207ENST00000477306 TEKT1Q969V4 418 aa18.2■□□□□ 0.5
HDGF-207ENST00000477306 ZFYVE28Q9HCC9 887 aa18.2■□□□□ 0.5
HDGF-207ENST00000477306 RBBP6Q7Z6E9 1792 aaKnown RBP18.19■□□□□ 0.5
HDGF-207ENST00000477306 HDLBPQ00341 1268 aaKnown RBP18.19■□□□□ 0.5
HDGF-207ENST00000477306 FAM43AQ8N2R8 423 aa18.19■□□□□ 0.5
HDGF-207ENST00000477306 VGLL2Q8N8G2 317 aa18.19■□□□□ 0.5
HDGF-207ENST00000477306 KLHDC4Q8TBB5 520 aa18.19■□□□□ 0.5
HDGF-207ENST00000477306 PDE8BO95263 885 aa18.18■□□□□ 0.5
HDGF-207ENST00000477306 EN2P19622 333 aaPredicted RBP18.18■□□□□ 0.5
HDGF-207ENST00000477306 BCAMP50895 628 aa18.18■□□□□ 0.5
HDGF-207ENST00000477306 GCC1Q96CN9 775 aa18.18■□□□□ 0.5
HDGF-207ENST00000477306 TMOD2Q9NZR1 351 aa18.18■□□□□ 0.5
HDGF-207ENST00000477306 SPDYE5A6NIY4 337 aa18.17■□□□□ 0.5
HDGF-207ENST00000477306 TRMT2AQ8IZ69 625 aaKnown RBP18.17■□□□□ 0.5
HDGF-207ENST00000477306 WRNIP1Q96S55 665 aa18.17■□□□□ 0.5
HDGF-207ENST00000477306 PTCH2Q9Y6C5 1203 aa18.17■□□□□ 0.5
HDGF-207ENST00000477306 SNCAIPQ9Y6H5 919 aa18.17■□□□□ 0.5
HDGF-207ENST00000477306 CCER2I3L3R5 266 aa18.16■□□□□ 0.5
HDGF-207ENST00000477306 ARHGEF6Q15052 776 aa18.16■□□□□ 0.5
HDGF-207ENST00000477306 ZKSCAN4Q969J2 545 aaPredicted RBP18.16■□□□□ 0.5
HDGF-207ENST00000477306 ZNF333Q96JL9 665 aa18.16■□□□□ 0.5
HDGF-207ENST00000477306 ZDHHC15Q96MV8 337 aa18.16■□□□□ 0.5
HDGF-207ENST00000477306 TMEM106CQ9BVX2 250 aa18.16■□□□□ 0.5
HDGF-207ENST00000477306 USP44Q9H0E7 712 aa18.16■□□□□ 0.5
HDGF-207ENST00000477306 KIAA0100Q14667 2235 aaKnown RBP18.15■□□□□ 0.5
HDGF-207ENST00000477306 SLC9C1Q4G0N8 1177 aa18.15■□□□□ 0.5
HDGF-207ENST00000477306 APOBEC3HQ6NTF7 200 aaKnown RBP18.15■□□□□ 0.5
HDGF-207ENST00000477306 FAM83AQ86UY5 434 aa18.15■□□□□ 0.5
HDGF-207ENST00000477306 ERO1BQ86YB8 467 aa18.15■□□□□ 0.5
HDGF-207ENST00000477306 MAST3O60307 1309 aa18.15■□□□□ 0.5
HDGF-207ENST00000477306 KIF16BQ96L93 1317 aa18.15■□□□□ 0.5
HDGF-207ENST00000477306 CENPFP49454 3210 aa18.15■□□□□ 0.5
HDGF-207ENST00000477306 WDHD1O75717 1129 aaPredicted RBP18.14■□□□□ 0.49
HDGF-207ENST00000477306 IFIT1P09914 478 aaKnown RBP18.14■□□□□ 0.49
HDGF-207ENST00000477306 CETPP11597 493 aa18.14■□□□□ 0.49
HDGF-207ENST00000477306 PUM3Q15397 648 aaKnown RBP18.14■□□□□ 0.49
HDGF-207ENST00000477306 MRIQ9BWK5 157 aa18.14■□□□□ 0.49
HDGF-207ENST00000477306 MKI67P46013 3256 aaKnown RBP18.14■□□□□ 0.49
HDGF-207ENST00000477306 BTBD19C9JJ37 291 aa18.13■□□□□ 0.49
HDGF-207ENST00000477306 IRF6O14896 467 aa18.13■□□□□ 0.49
HDGF-207ENST00000477306 TLR2O60603 784 aa18.13■□□□□ 0.49
HDGF-207ENST00000477306 MYCP01106 439 aaPredicted RBP18.13■□□□□ 0.49
HDGF-207ENST00000477306 FGFR2P21802 821 aa18.13■□□□□ 0.49
HDGF-207ENST00000477306 SNAPC2Q13487 334 aa18.13■□□□□ 0.49
HDGF-207ENST00000477306 HABP4Q5JVS0 413 aaKnown RBP18.13■□□□□ 0.49
HDGF-207ENST00000477306 FKBP1CQ5VVH2 108 aa18.13■□□□□ 0.49
HDGF-207ENST00000477306 NBPF11Q86T75 865 aa18.13■□□□□ 0.49
HDGF-207ENST00000477306 HOOK2Q96ED9 719 aa18.13■□□□□ 0.49
HDGF-207ENST00000477306 ARHGAP39Q9C0H5 1083 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms