RNA–Protein interactions for RNA: ENST00000477282.5

GCOM1-207, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-207ENST00000477282 ATG7O95352 703 aa7.72□□□□□ -1.17
GCOM1-207ENST00000477282 HSP90AB1P08238 724 aaKnown RBP7.72□□□□□ -1.17
GCOM1-207ENST00000477282 HMOX1P09601 288 aa7.72□□□□□ -1.17
GCOM1-207ENST00000477282 POLD1P28340 1107 aa7.72□□□□□ -1.17
GCOM1-207ENST00000477282 SIK1P57059 783 aa7.72□□□□□ -1.17
GCOM1-207ENST00000477282 RELBQ01201 579 aa7.72□□□□□ -1.17
GCOM1-207ENST00000477282 C1orf141Q5JVX7 400 aa7.72□□□□□ -1.17
GCOM1-207ENST00000477282 NPAS3Q8IXF0 933 aa7.72□□□□□ -1.17
GCOM1-207ENST00000477282 DCAF5Q96JK2 942 aa7.72□□□□□ -1.17
GCOM1-207ENST00000477282 AGBL1Q96MI9 1066 aa7.72□□□□□ -1.17
GCOM1-207ENST00000477282 PRDM10Q9NQV6 1147 aa7.72□□□□□ -1.17
GCOM1-207ENST00000477282 ATG3Q9NT62 314 aa7.72□□□□□ -1.17
GCOM1-207ENST00000477282 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.72□□□□□ -1.17
GCOM1-207ENST00000477282 ATP5J2-PTCD1G3V325 749 aa7.71□□□□□ -1.18
GCOM1-207ENST00000477282 DIAPH1O60610 1272 aaKnown RBP7.71□□□□□ -1.18
GCOM1-207ENST00000477282 MYCP01106 439 aaPredicted RBP7.71□□□□□ -1.18
GCOM1-207ENST00000477282 HMGB2P26583 209 aaKnown RBP7.71□□□□□ -1.18
GCOM1-207ENST00000477282 ADD1P35611 737 aaKnown RBP7.71□□□□□ -1.18
GCOM1-207ENST00000477282 PTGIRP43119 386 aa7.71□□□□□ -1.18
GCOM1-207ENST00000477282 CABP4P57796 275 aa7.71□□□□□ -1.18
GCOM1-207ENST00000477282 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.71□□□□□ -1.18
GCOM1-207ENST00000477282 MSL1Q68DK7 614 aa7.71□□□□□ -1.18
GCOM1-207ENST00000477282 SMIM5Q71RC9 77 aa7.71□□□□□ -1.18
GCOM1-207ENST00000477282 CYP2U1Q7Z449 544 aa7.71□□□□□ -1.18
GCOM1-207ENST00000477282 RNF135Q8IUD6 432 aa7.71□□□□□ -1.18
GCOM1-207ENST00000477282 PPP1R12CQ9BZL4 782 aa7.71□□□□□ -1.18
GCOM1-207ENST00000477282 CUEDC1Q9NWM3 386 aaPredicted RBP7.71□□□□□ -1.18
GCOM1-207ENST00000477282 SUPT16HQ9Y5B9 1047 aaKnown RBP7.71□□□□□ -1.18
GCOM1-207ENST00000477282 PLEKHG2Q9H7P9 1386 aa7.71□□□□□ -1.18
GCOM1-207ENST00000477282 ITGB4P16144 1822 aa7.7□□□□□ -1.18
GCOM1-207ENST00000477282 TERTO14746 1132 aaKnown RBP7.7□□□□□ -1.18
GCOM1-207ENST00000477282 ITPK1Q13572 414 aa7.7□□□□□ -1.18
GCOM1-207ENST00000477282 AMIGO3Q86WK7 504 aa7.7□□□□□ -1.18
GCOM1-207ENST00000477282 NFATC2IPQ8NCF5 419 aa7.7□□□□□ -1.18
GCOM1-207ENST00000477282 LINC00116Q8NCU8 138 aa7.7□□□□□ -1.18
GCOM1-207ENST00000477282 POLMQ9NP87 494 aaPredicted RBP7.7□□□□□ -1.18
GCOM1-207ENST00000477282 NXF1Q9UBU9 619 aaKnown RBP7.7□□□□□ -1.18
GCOM1-207ENST00000477282 KDRP35968 1356 aa7.7□□□□□ -1.18
GCOM1-207ENST00000477282 U2SURPO15042 1029 aaKnown RBP7.69□□□□□ -1.18
GCOM1-207ENST00000477282 MCCP23508 829 aa7.69□□□□□ -1.18
GCOM1-207ENST00000477282 ERCC5P28715 1186 aaPredicted RBP7.69□□□□□ -1.18
GCOM1-207ENST00000477282 TREML4Q6UXN2 200 aa7.69□□□□□ -1.18
GCOM1-207ENST00000477282 APBB1IPQ7Z5R6 666 aaPredicted RBP7.69□□□□□ -1.18
GCOM1-207ENST00000477282 FLAD1Q8NFF5 587 aa7.69□□□□□ -1.18
GCOM1-207ENST00000477282 DOLKQ9UPQ8 538 aa7.69□□□□□ -1.18
GCOM1-207ENST00000477282 NPC1L1Q9UHC9 1359 aa7.69□□□□□ -1.18
GCOM1-207ENST00000477282 C5P01031 1676 aa7.69□□□□□ -1.18
GCOM1-207ENST00000477282 PTCD1O75127 700 aaKnown RBP7.68□□□□□ -1.18
GCOM1-207ENST00000477282 WFS1O76024 890 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 YY1P25490 414 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 PTPROQ16827 1216 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 MTHFSDQ2M296 383 aaKnown RBP7.68□□□□□ -1.18
GCOM1-207ENST00000477282 AKAP4Q5JQC9 854 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 SLC4A9Q96Q91 983 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 ZNF395Q9H8N7 513 aaPredicted RBP7.68□□□□□ -1.18
GCOM1-207ENST00000477282 LGR6Q9HBX8 967 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 KDM6AO15550 1401 aaPredicted RBP7.68□□□□□ -1.18
GCOM1-207ENST00000477282 TUBGCP6Q96RT7 1819 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 PEX14O75381 377 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 SSFA2P28290 1259 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 ARID4AP29374 1257 aaPredicted RBP7.68□□□□□ -1.18
GCOM1-207ENST00000477282 LMOD1P29536 600 aaPredicted RBP7.68□□□□□ -1.18
GCOM1-207ENST00000477282 USP4Q13107 963 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 MAP7D1Q3KQU3 841 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 PHTF2Q8N3S3 785 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 CCDC85AQ96PX6 553 aaPredicted RBP7.68□□□□□ -1.18
GCOM1-207ENST00000477282 INSM2Q96T92 566 aaPredicted RBP7.68□□□□□ -1.18
GCOM1-207ENST00000477282 DNMT3LQ9UJW3 386 aa7.68□□□□□ -1.18
GCOM1-207ENST00000477282 C4BP0C0L5 1744 aa7.67□□□□□ -1.18
GCOM1-207ENST00000477282 QSER1Q2KHR3 1735 aa7.67□□□□□ -1.18
GCOM1-207ENST00000477282 SOBPA7XYQ1 873 aa7.67□□□□□ -1.18
GCOM1-207ENST00000477282 RNMTO43148 476 aaKnown RBP7.67□□□□□ -1.18
GCOM1-207ENST00000477282 GPR162Q16538 588 aa7.67□□□□□ -1.18
GCOM1-207ENST00000477282 TMTC2Q8N394 836 aa7.67□□□□□ -1.18
GCOM1-207ENST00000477282 LARGE2Q8N3Y3 721 aa7.67□□□□□ -1.18
GCOM1-207ENST00000477282 NLGN2Q8NFZ4 835 aa7.67□□□□□ -1.18
GCOM1-207ENST00000477282 SLC52A2Q9HAB3 445 aa7.67□□□□□ -1.18
GCOM1-207ENST00000477282 TAF1LQ8IZX4 1826 aa7.66□□□□□ -1.18
GCOM1-207ENST00000477282 MAP3K5Q99683 1374 aa7.66□□□□□ -1.18
GCOM1-207ENST00000477282 GPC1P35052 558 aa7.66□□□□□ -1.18
GCOM1-207ENST00000477282 CTSOP43234 321 aaPredicted RBP7.66□□□□□ -1.18
GCOM1-207ENST00000477282 SCTRP47872 440 aa7.66□□□□□ -1.18
GCOM1-207ENST00000477282 NFX1Q12986 1120 aaKnown RBP7.66□□□□□ -1.18
GCOM1-207ENST00000477282 SLC39A6Q13433 755 aa7.66□□□□□ -1.18
GCOM1-207ENST00000477282 TRAPPC3LQ5T215 181 aa7.66□□□□□ -1.18
GCOM1-207ENST00000477282 NPAS4Q8IUM7 802 aa7.66□□□□□ -1.18
GCOM1-207ENST00000477282 CCAR1Q8IX12 1150 aaKnown RBP7.66□□□□□ -1.18
GCOM1-207ENST00000477282 KDF1Q8NAX2 398 aaPredicted RBP7.66□□□□□ -1.18
GCOM1-207ENST00000477282 KCNB2Q92953 911 aa7.66□□□□□ -1.18
GCOM1-207ENST00000477282 CFAP53Q96M91 514 aa7.66□□□□□ -1.18
GCOM1-207ENST00000477282 NLRP3Q96P20 1036 aa7.66□□□□□ -1.18
GCOM1-207ENST00000477282 TANGO6Q9C0B7 1094 aa7.66□□□□□ -1.18
GCOM1-207ENST00000477282 RTCBQ9Y3I0 505 aaKnown RBP7.66□□□□□ -1.18
GCOM1-207ENST00000477282 FIGNL2A6NMB9 653 aa7.65□□□□□ -1.18
GCOM1-207ENST00000477282 MAP4K4O95819 1239 aaPredicted RBP7.65□□□□□ -1.18
GCOM1-207ENST00000477282 GNRH1P01148 92 aa7.65□□□□□ -1.18
GCOM1-207ENST00000477282 PPP2R1AP30153 589 aa7.65□□□□□ -1.18
GCOM1-207ENST00000477282 EGFLAMQ63HQ2 1017 aa7.65□□□□□ -1.18
GCOM1-207ENST00000477282 LNPKQ9C0E8 428 aa7.65□□□□□ -1.18
GCOM1-207ENST00000477282 OSBPL3Q9H4L5 887 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms