RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 TTF2Q9UNY4 1162 aaKnown RBP15.37■□□□□ 0.05
APTX-220ENST00000476858 CLRN2A0PK11 232 aa15.36■□□□□ 0.05
APTX-220ENST00000476858 PRDX5P30044 214 aa15.36■□□□□ 0.05
APTX-220ENST00000476858 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
APTX-220ENST00000476858 KRT26Q7Z3Y9 468 aa15.36■□□□□ 0.05
APTX-220ENST00000476858 ZC3H15Q8WU90 426 aaKnown RBP15.36■□□□□ 0.05
APTX-220ENST00000476858 HMG20BQ9P0W2 317 aa15.36■□□□□ 0.05
APTX-220ENST00000476858 NDUFB9Q9Y6M9 179 aa15.36■□□□□ 0.05
APTX-220ENST00000476858 SMARCA5O60264 1052 aaPredicted RBP15.35■□□□□ 0.05
APTX-220ENST00000476858 MCAMP43121 646 aa15.35■□□□□ 0.05
APTX-220ENST00000476858 EVX2Q03828 476 aa15.35■□□□□ 0.05
APTX-220ENST00000476858 DIXDC1Q155Q3 683 aa15.35■□□□□ 0.05
APTX-220ENST00000476858 TBC1D9Q6ZT07 1266 aa15.35■□□□□ 0.05
APTX-220ENST00000476858 EXOC6Q8TAG9 804 aa15.35■□□□□ 0.05
APTX-220ENST00000476858 RHPN1Q8TCX5 695 aa15.35■□□□□ 0.05
APTX-220ENST00000476858 ZNF384Q8TF68 577 aa15.35■□□□□ 0.05
APTX-220ENST00000476858 ZNF408Q9H9D4 720 aa15.35■□□□□ 0.05
APTX-220ENST00000476858 SNRKQ9NRH2 765 aa15.35■□□□□ 0.05
APTX-220ENST00000476858 AKAP2Q9Y2D5 859 aa15.35■□□□□ 0.05
APTX-220ENST00000476858 CRKP46108 304 aa15.34■□□□□ 0.05
APTX-220ENST00000476858 CDAN1Q8IWY9 1227 aa15.34■□□□□ 0.05
APTX-220ENST00000476858 OGFOD1Q8N543 542 aa15.34■□□□□ 0.05
APTX-220ENST00000476858 GPR108Q9NPR9 543 aa15.34■□□□□ 0.05
APTX-220ENST00000476858 FZD1Q9UP38 647 aa15.34■□□□□ 0.05
APTX-220ENST00000476858 CELF2O95319 508 aaKnown RBP15.33■□□□□ 0.04
APTX-220ENST00000476858 ARID4AP29374 1257 aaPredicted RBP15.33■□□□□ 0.04
APTX-220ENST00000476858 RBM5P52756 815 aaKnown RBP eCLIP15.33■□□□□ 0.04
APTX-220ENST00000476858 CACNB3P54284 484 aa15.33■□□□□ 0.04
APTX-220ENST00000476858 DLGAP5Q15398 846 aa15.33■□□□□ 0.04
APTX-220ENST00000476858 MOB2Q70IA6 237 aa15.33■□□□□ 0.04
APTX-220ENST00000476858 CDC37L1Q7L3B6 337 aa15.33■□□□□ 0.04
APTX-220ENST00000476858 MTMR14Q8NCE2 650 aa15.33■□□□□ 0.04
APTX-220ENST00000476858 DCPSQ96C86 337 aaKnown RBP15.33■□□□□ 0.04
APTX-220ENST00000476858 CDCA5Q96FF9 252 aa15.33■□□□□ 0.04
APTX-220ENST00000476858 TDRD3Q9H7E2 651 aaKnown RBP15.33■□□□□ 0.04
APTX-220ENST00000476858 MKRN1Q9UHC7 482 aaKnown RBP15.33■□□□□ 0.04
APTX-220ENST00000476858 TRPM7Q96QT4 1865 aa15.32■□□□□ 0.04
APTX-220ENST00000476858 TMEM88BA6NKF7 163 aa15.32■□□□□ 0.04
APTX-220ENST00000476858 AACSQ86V21 672 aa15.32■□□□□ 0.04
APTX-220ENST00000476858 CREBZFQ9NS37 354 aa15.32■□□□□ 0.04
APTX-220ENST00000476858 HDAC9Q9UKV0 1011 aa15.32■□□□□ 0.04
APTX-220ENST00000476858 DENND2AQ9ULE3 1009 aa15.32■□□□□ 0.04
APTX-220ENST00000476858 AKAP11Q9UKA4 1901 aa15.32■□□□□ 0.04
APTX-220ENST00000476858 GORABQ5T7V8 394 aa15.31■□□□□ 0.04
APTX-220ENST00000476858 APOBEC3HQ6NTF7 200 aaKnown RBP15.31■□□□□ 0.04
APTX-220ENST00000476858 SPATA5Q8NB90 893 aa15.31■□□□□ 0.04
APTX-220ENST00000476858 WDR66Q8TBY9 1149 aa15.31■□□□□ 0.04
APTX-220ENST00000476858 GNL3LQ9NVN8 582 aaKnown RBP15.31■□□□□ 0.04
APTX-220ENST00000476858 ZNF70Q9UC06 446 aaPredicted RBP15.31■□□□□ 0.04
APTX-220ENST00000476858 SERPINA10Q9UK55 444 aa15.31■□□□□ 0.04
APTX-220ENST00000476858 SSC5DA1L4H1 1573 aa15.31■□□□□ 0.04
APTX-220ENST00000476858 MYO5AQ9Y4I1 1855 aaKnown RBP15.31■□□□□ 0.04
APTX-220ENST00000476858 HMMRO75330 724 aa15.3■□□□□ 0.04
APTX-220ENST00000476858 ZAP70P43403 619 aa15.3■□□□□ 0.04
APTX-220ENST00000476858 ECM29Q5VYK3 1845 aa15.3■□□□□ 0.04
APTX-220ENST00000476858 SULF1Q8IWU6 871 aa15.3■□□□□ 0.04
APTX-220ENST00000476858 TBC1D22AQ8WUA7 517 aa15.3■□□□□ 0.04
APTX-220ENST00000476858 PIH1D3Q9NQM4 214 aaKnown RBP15.3■□□□□ 0.04
APTX-220ENST00000476858 SALL1Q9NSC2 1324 aa15.3■□□□□ 0.04
APTX-220ENST00000476858 ABCF2Q9UG63 623 aa15.3■□□□□ 0.04
APTX-220ENST00000476858 DAGLAQ9Y4D2 1042 aa15.3■□□□□ 0.04
APTX-220ENST00000476858 PITPNM2Q9BZ72 1349 aa15.29■□□□□ 0.04
APTX-220ENST00000476858 SEMA3EO15041 775 aa15.29■□□□□ 0.04
APTX-220ENST00000476858 CYP2E1P05181 493 aaPredicted RBP15.29■□□□□ 0.04
APTX-220ENST00000476858 TTC39AQ5SRH9 613 aa15.29■□□□□ 0.04
APTX-220ENST00000476858 KIF1BPQ96EK5 621 aa15.29■□□□□ 0.04
APTX-220ENST00000476858 ANTXR1Q9H6X2 564 aa15.29■□□□□ 0.04
APTX-220ENST00000476858 DCTPP1Q9H773 170 aa15.29■□□□□ 0.04
APTX-220ENST00000476858 VEZTQ9HBM0 779 aa15.29■□□□□ 0.04
APTX-220ENST00000476858 CNTNAP1P78357 1384 aa15.28■□□□□ 0.04
APTX-220ENST00000476858 TCP10L2B9ZVM9 353 aa15.28■□□□□ 0.04
APTX-220ENST00000476858 LDHBP07195 334 aaKnown RBP15.28■□□□□ 0.04
APTX-220ENST00000476858 MECOMQ03112 1051 aa15.28■□□□□ 0.04
APTX-220ENST00000476858 OTUD7AQ8TE49 926 aaPredicted RBP15.28■□□□□ 0.04
APTX-220ENST00000476858 KLRG1Q96E93 195 aa15.28■□□□□ 0.04
APTX-220ENST00000476858 EDC3Q96F86 508 aaKnown RBP15.28■□□□□ 0.04
APTX-220ENST00000476858 CHMP4BQ9H444 224 aaKnown RBP15.28■□□□□ 0.04
APTX-220ENST00000476858 ABT1Q9ULW3 272 aaKnown RBP15.28■□□□□ 0.04
APTX-220ENST00000476858 TLL2Q9Y6L7 1015 aa15.28■□□□□ 0.04
APTX-220ENST00000476858 PDS5AQ29RF7 1337 aaKnown RBP15.27■□□□□ 0.04
APTX-220ENST00000476858 VEGFBP49765 207 aa15.27■□□□□ 0.04
APTX-220ENST00000476858 PRKG1Q13976 671 aa15.27■□□□□ 0.04
APTX-220ENST00000476858 TSHZ3Q63HK5 1081 aa15.27■□□□□ 0.04
APTX-220ENST00000476858 SAPCD2Q86UD0 394 aa15.27■□□□□ 0.04
APTX-220ENST00000476858 ERC1Q8IUD2 1116 aa15.27■□□□□ 0.04
APTX-220ENST00000476858 TEKT1Q969V4 418 aa15.27■□□□□ 0.04
APTX-220ENST00000476858 ZDHHC15Q96MV8 337 aa15.27■□□□□ 0.04
APTX-220ENST00000476858 ZIC5Q96T25 663 aa15.27■□□□□ 0.04
APTX-220ENST00000476858 DEFB129Q9H1M3 183 aa15.27■□□□□ 0.04
APTX-220ENST00000476858 RASSF10A6NK89 507 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 RAB11FIP3O75154 756 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 CHGBP05060 677 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 UQCRFS1P1P0C7P4 283 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 SLURP2P0DP57 97 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 HDLBPQ00341 1268 aaKnown RBP15.26■□□□□ 0.03
APTX-220ENST00000476858 NFIAQ12857 509 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 RASA3Q14644 834 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 HSP90AB4PQ58FF6 505 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 NBPF12Q5TAG4 269 aaPredicted RBP15.26■□□□□ 0.03
APTX-220ENST00000476858 CYP4F22Q6NT55 531 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms