RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MYCP01106 439 aaPredicted RBP14.52□□□□□ -0.09
BRCA1-213ENST00000476777 GTF2A2P52657 109 aa14.52□□□□□ -0.09
BRCA1-213ENST00000476777 VGLL4Q14135 290 aa14.52□□□□□ -0.09
BRCA1-213ENST00000476777 CCL15Q16663 113 aa14.52□□□□□ -0.09
BRCA1-213ENST00000476777 MYH16Q9H6N6 1097 aa14.52□□□□□ -0.09
BRCA1-213ENST00000476777 FAM205AQ6ZU69 1335 aa14.51□□□□□ -0.09
BRCA1-213ENST00000476777 MAP3K9P80192 1104 aa14.51□□□□□ -0.09
BRCA1-213ENST00000476777 FOXO4P98177 505 aa14.51□□□□□ -0.09
BRCA1-213ENST00000476777 FLIIQ13045 1269 aa14.51□□□□□ -0.09
BRCA1-213ENST00000476777 IFIT5Q13325 482 aaKnown RBP14.51□□□□□ -0.09
BRCA1-213ENST00000476777 LINS1Q8NG48 757 aa14.51□□□□□ -0.09
BRCA1-213ENST00000476777 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.51□□□□□ -0.09
BRCA1-213ENST00000476777 DNAAF4Q8WXU2 420 aa14.51□□□□□ -0.09
BRCA1-213ENST00000476777 ARHGAP39Q9C0H5 1083 aa14.51□□□□□ -0.09
BRCA1-213ENST00000476777 TDRD3Q9H7E2 651 aaKnown RBP14.51□□□□□ -0.09
BRCA1-213ENST00000476777 SERPINA10Q9UK55 444 aa14.51□□□□□ -0.09
BRCA1-213ENST00000476777 A0A1B0GUL6 1792 aa14.51□□□□□ -0.09
BRCA1-213ENST00000476777 TWISTNBQ3B726 338 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-213ENST00000476777 MFSD14BQ5SR56 506 aa14.5□□□□□ -0.09
BRCA1-213ENST00000476777 DZIP1LQ8IYY4 767 aaKnown RBP14.5□□□□□ -0.09
BRCA1-213ENST00000476777 SH3TC2Q8TF17 1288 aa14.5□□□□□ -0.09
BRCA1-213ENST00000476777 TMEM39BQ9GZU3 492 aa14.5□□□□□ -0.09
BRCA1-213ENST00000476777 TTF2Q9UNY4 1162 aaKnown RBP14.5□□□□□ -0.09
BRCA1-213ENST00000476777 TCP10L2B9ZVM9 353 aa14.49□□□□□ -0.09
BRCA1-213ENST00000476777 TLR2O60603 784 aa14.49□□□□□ -0.09
BRCA1-213ENST00000476777 LACTBP83111 547 aaPredicted RBP14.49□□□□□ -0.09
BRCA1-213ENST00000476777 FKBP5Q13451 457 aaPredicted RBP14.49□□□□□ -0.09
BRCA1-213ENST00000476777 TDRD7Q8NHU6 1098 aaKnown RBP14.49□□□□□ -0.09
BRCA1-213ENST00000476777 CSADQ9Y600 493 aa14.49□□□□□ -0.09
BRCA1-213ENST00000476777 SPDYE5A6NIY4 337 aa14.48□□□□□ -0.09
BRCA1-213ENST00000476777 PLIN1O60240 522 aa14.48□□□□□ -0.09
BRCA1-213ENST00000476777 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
BRCA1-213ENST00000476777 ZNF594Q96JF6 807 aaPredicted RBP14.48□□□□□ -0.09
BRCA1-213ENST00000476777 CHMP3Q9Y3E7 222 aa14.48□□□□□ -0.09
BRCA1-213ENST00000476777 ZSWIM8A7E2V4 1837 aa14.48□□□□□ -0.09
BRCA1-213ENST00000476777 BTBD19C9JJ37 291 aa14.47□□□□□ -0.09
BRCA1-213ENST00000476777 GNRH1P01148 92 aa14.47□□□□□ -0.09
BRCA1-213ENST00000476777 CETPP11597 493 aa14.47□□□□□ -0.09
BRCA1-213ENST00000476777 CRKP46108 304 aa14.47□□□□□ -0.09
BRCA1-213ENST00000476777 KIF22Q14807 665 aa14.47□□□□□ -0.09
BRCA1-213ENST00000476777 EPHA10Q5JZY3 1008 aa14.47□□□□□ -0.09
BRCA1-213ENST00000476777 LMBR1LQ6UX01 489 aa14.47□□□□□ -0.09
BRCA1-213ENST00000476777 LDHAL6AQ6ZMR3 332 aa14.47□□□□□ -0.09
BRCA1-213ENST00000476777 SHISA4Q96DD7 197 aa14.47□□□□□ -0.09
BRCA1-213ENST00000476777 PRKRIP1Q9H875 184 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-213ENST00000476777 ZCCHC17Q9NP64 241 aaKnown RBP14.47□□□□□ -0.09
BRCA1-213ENST00000476777 SNCAIPQ9Y6H5 919 aa14.47□□□□□ -0.09
BRCA1-213ENST00000476777 CACNA1FO60840 1977 aa14.47□□□□□ -0.09
BRCA1-213ENST00000476777 WDHD1O75717 1129 aaPredicted RBP14.46□□□□□ -0.09
BRCA1-213ENST00000476777 HIBADHP31937 336 aaKnown RBP14.46□□□□□ -0.09
BRCA1-213ENST00000476777 GYG1P46976 350 aa14.46□□□□□ -0.09
BRCA1-213ENST00000476777 TNNI2P48788 182 aa14.46□□□□□ -0.09
BRCA1-213ENST00000476777 FAM84BQ96KN1 310 aaPredicted RBP14.46□□□□□ -0.09
BRCA1-213ENST00000476777 RBM27Q9P2N5 1060 aaKnown RBP14.46□□□□□ -0.09
BRCA1-213ENST00000476777 ARAP2Q8WZ64 1704 aa14.46□□□□□ -0.1
BRCA1-213ENST00000476777 IRF6O14896 467 aa14.45□□□□□ -0.1
BRCA1-213ENST00000476777 CTGFP29279 349 aa14.45□□□□□ -0.1
BRCA1-213ENST00000476777 PRMT2P55345 433 aa14.45□□□□□ -0.1
BRCA1-213ENST00000476777 UBE4AQ14139 1066 aa14.45□□□□□ -0.1
BRCA1-213ENST00000476777 MTFR1Q15390 333 aa14.45□□□□□ -0.1
BRCA1-213ENST00000476777 GRIK5Q16478 980 aa14.45□□□□□ -0.1
BRCA1-213ENST00000476777 CCDC57Q2TAC2 916 aa14.45□□□□□ -0.1
BRCA1-213ENST00000476777 BEND3Q5T5X7 828 aa14.45□□□□□ -0.1
BRCA1-213ENST00000476777 ERO1BQ86YB8 467 aa14.45□□□□□ -0.1
BRCA1-213ENST00000476777 CNNM1Q9NRU3 951 aa14.45□□□□□ -0.1
BRCA1-213ENST00000476777 SNAPC2Q13487 334 aa14.44□□□□□ -0.1
BRCA1-213ENST00000476777 CCDC27Q2M243 656 aa14.44□□□□□ -0.1
BRCA1-213ENST00000476777 TAF7LQ5H9L4 462 aa14.44□□□□□ -0.1
BRCA1-213ENST00000476777 C17orf99Q6UX52 265 aa14.44□□□□□ -0.1
BRCA1-213ENST00000476777 WWC1Q8IX03 1113 aa14.44□□□□□ -0.1
BRCA1-213ENST00000476777 DPF3Q92784 378 aa14.44□□□□□ -0.1
BRCA1-213ENST00000476777 ZKSCAN4Q969J2 545 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-213ENST00000476777 F6X3S4 739 aa14.43□□□□□ -0.1
BRCA1-213ENST00000476777 CACNB3P54284 484 aa14.43□□□□□ -0.1
BRCA1-213ENST00000476777 HDLBPQ00341 1268 aaKnown RBP14.43□□□□□ -0.1
BRCA1-213ENST00000476777 PPIL2Q13356 520 aa14.43□□□□□ -0.1
BRCA1-213ENST00000476777 UBE2Q1Q7Z7E8 422 aa14.43□□□□□ -0.1
BRCA1-213ENST00000476777 WRNIP1Q96S55 665 aa14.43□□□□□ -0.1
BRCA1-213ENST00000476777 PRO3102Q9H379 93 aa14.43□□□□□ -0.1
BRCA1-213ENST00000476777 ECM2O94769 699 aaPredicted RBP14.42□□□□□ -0.1
BRCA1-213ENST00000476777 PSMC4P43686 418 aa14.42□□□□□ -0.1
BRCA1-213ENST00000476777 TRIM47Q96LD4 638 aa14.42□□□□□ -0.1
BRCA1-213ENST00000476777 PUS3Q9BZE2 481 aaKnown RBP14.42□□□□□ -0.1
BRCA1-213ENST00000476777 SRRDQ9UH36 339 aa14.42□□□□□ -0.1
BRCA1-213ENST00000476777 GRM8O00222 908 aa14.41□□□□□ -0.1
BRCA1-213ENST00000476777 VAMP4O75379 141 aa14.41□□□□□ -0.1
BRCA1-213ENST00000476777 GJA8P48165 433 aa14.41□□□□□ -0.1
BRCA1-213ENST00000476777 FBXO33Q7Z6M2 555 aa14.41□□□□□ -0.1
BRCA1-213ENST00000476777 FAM83AQ86UY5 434 aa14.41□□□□□ -0.1
BRCA1-213ENST00000476777 NKX2-3Q8TAU0 364 aa14.41□□□□□ -0.1
BRCA1-213ENST00000476777 CPA4Q9UI42 421 aa14.41□□□□□ -0.1
BRCA1-213ENST00000476777 IL16Q14005 1332 aa14.41□□□□□ -0.1
BRCA1-213ENST00000476777 ADGRA2Q96PE1 1338 aa14.41□□□□□ -0.1
BRCA1-213ENST00000476777 GJB1P08034 283 aa14.4□□□□□ -0.1
BRCA1-213ENST00000476777 OSBPP22059 807 aa14.4□□□□□ -0.1
BRCA1-213ENST00000476777 HOXD10P28358 340 aa14.4□□□□□ -0.1
BRCA1-213ENST00000476777 GRK4P32298 578 aa14.4□□□□□ -0.1
BRCA1-213ENST00000476777 PPATQ06203 517 aa14.4□□□□□ -0.1
BRCA1-213ENST00000476777 FKBP1CQ5VVH2 108 aa14.4□□□□□ -0.1
BRCA1-213ENST00000476777 APOBEC3HQ6NTF7 200 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms