RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.68□□□□□ -1.5
NPHP3-207ENST00000476742 DNAJC14Q6Y2X3 702 aaPredicted RBP5.68□□□□□ -1.5
NPHP3-207ENST00000476742 SLC7A3Q8WY07 619 aa5.68□□□□□ -1.5
NPHP3-207ENST00000476742 OSGEPQ9NPF4 335 aa5.68□□□□□ -1.5
NPHP3-207ENST00000476742 SPG7Q9UQ90 795 aa5.68□□□□□ -1.5
NPHP3-207ENST00000476742 METTL12A8MUP2 240 aa5.67□□□□□ -1.5
NPHP3-207ENST00000476742 DLL1O00548 723 aa5.67□□□□□ -1.5
NPHP3-207ENST00000476742 GIPC1O14908 333 aa5.67□□□□□ -1.5
NPHP3-207ENST00000476742 PRPF40AO75400 957 aaKnown RBP5.67□□□□□ -1.5
NPHP3-207ENST00000476742 CD68P34810 354 aaPredicted RBP5.67□□□□□ -1.5
NPHP3-207ENST00000476742 GRIA4P48058 902 aa5.67□□□□□ -1.5
NPHP3-207ENST00000476742 GRM2Q14416 872 aa5.67□□□□□ -1.5
NPHP3-207ENST00000476742 PRPF40BQ6NWY9 871 aaKnown RBP5.67□□□□□ -1.5
NPHP3-207ENST00000476742 ADAMTSL4Q6UY14 1074 aa5.67□□□□□ -1.5
NPHP3-207ENST00000476742 DDX54Q8TDD1 881 aaKnown RBP5.67□□□□□ -1.5
NPHP3-207ENST00000476742 LENG1Q96BZ8 264 aaPredicted RBP5.67□□□□□ -1.5
NPHP3-207ENST00000476742 FRMD6Q96NE9 622 aa5.67□□□□□ -1.5
NPHP3-207ENST00000476742 BCO2Q9BYV7 579 aa5.67□□□□□ -1.5
NPHP3-207ENST00000476742 CLEC4MQ9H2X3 399 aaPredicted RBP5.67□□□□□ -1.5
NPHP3-207ENST00000476742 WWC3Q9ULE0 1092 aa5.67□□□□□ -1.5
NPHP3-207ENST00000476742 TMEM238LA0A1B0GVL6 79 aa5.66□□□□□ -1.5
NPHP3-207ENST00000476742 XRCC5P13010 732 aaKnown RBP5.66□□□□□ -1.5
NPHP3-207ENST00000476742 BUD31P41223 144 aaPredicted RBP5.66□□□□□ -1.5
NPHP3-207ENST00000476742 PTPN12Q05209 780 aaKnown RBP5.66□□□□□ -1.5
NPHP3-207ENST00000476742 C19orf57Q0VDD7 668 aa5.66□□□□□ -1.5
NPHP3-207ENST00000476742 TRIM26Q12899 539 aaPredicted RBP5.66□□□□□ -1.5
NPHP3-207ENST00000476742 SPRED3Q2MJR0 410 aa5.66□□□□□ -1.5
NPHP3-207ENST00000476742 PI16Q6UXB8 463 aa5.66□□□□□ -1.5
NPHP3-207ENST00000476742 DTHD1Q6ZMT9 781 aa5.66□□□□□ -1.5
NPHP3-207ENST00000476742 VN1R5Q7Z5H4 357 aa5.66□□□□□ -1.5
NPHP3-207ENST00000476742 NPAS4Q8IUM7 802 aa5.66□□□□□ -1.5
NPHP3-207ENST00000476742 CARD10Q9BWT7 1032 aa5.66□□□□□ -1.5
NPHP3-207ENST00000476742 SRCIN1Q9C0H9 1055 aa5.66□□□□□ -1.5
NPHP3-207ENST00000476742 MRPL18Q9H0U6 180 aaKnown RBP5.66□□□□□ -1.5
NPHP3-207ENST00000476742 SOX1O00570 391 aaPredicted RBP5.65□□□□□ -1.5
NPHP3-207ENST00000476742 ESRRAP11474 423 aaPredicted RBP5.65□□□□□ -1.5
NPHP3-207ENST00000476742 ITPKAP23677 461 aa5.65□□□□□ -1.5
NPHP3-207ENST00000476742 FCGRTP55899 365 aa5.65□□□□□ -1.5
NPHP3-207ENST00000476742 PCDH1Q08174 1060 aa5.65□□□□□ -1.5
NPHP3-207ENST00000476742 LILRA6Q6PI73 481 aa5.65□□□□□ -1.5
NPHP3-207ENST00000476742 NXPE4Q6UWF7 544 aa5.65□□□□□ -1.5
NPHP3-207ENST00000476742 SHISA2Q6UWI4 295 aa5.65□□□□□ -1.5
NPHP3-207ENST00000476742 GALNT11Q8NCW6 608 aa5.65□□□□□ -1.5
NPHP3-207ENST00000476742 KLHDC7BQ96G42 594 aa5.65□□□□□ -1.5
NPHP3-207ENST00000476742 SOX17Q9H6I2 414 aaPredicted RBP5.65□□□□□ -1.5
NPHP3-207ENST00000476742 ABCB6Q9NP58 842 aa5.65□□□□□ -1.5
NPHP3-207ENST00000476742 ADAMTS4O75173 837 aa5.64□□□□□ -1.51
NPHP3-207ENST00000476742 GSTT1P30711 240 aa5.64□□□□□ -1.51
NPHP3-207ENST00000476742 MFAP1P55081 439 aaKnown RBP5.64□□□□□ -1.51
NPHP3-207ENST00000476742 RPS26P11Q5JNZ5 115 aaPredicted RBP5.64□□□□□ -1.51
NPHP3-207ENST00000476742 GLIS3Q8NEA6 775 aa5.64□□□□□ -1.51
NPHP3-207ENST00000476742 SETDB2Q96T68 719 aa5.64□□□□□ -1.51
NPHP3-207ENST00000476742 BCL11AQ9H165 835 aa5.64□□□□□ -1.51
NPHP3-207ENST00000476742 ZNF576Q9H609 170 aa5.64□□□□□ -1.51
NPHP3-207ENST00000476742 GNA15P30679 374 aa5.63□□□□□ -1.51
NPHP3-207ENST00000476742 ITGAEP38570 1179 aa5.63□□□□□ -1.51
NPHP3-207ENST00000476742 NLRP12P59046 1061 aa5.63□□□□□ -1.51
NPHP3-207ENST00000476742 XPCQ01831 940 aaPredicted RBP5.63□□□□□ -1.51
NPHP3-207ENST00000476742 GSTM4Q03013 218 aa5.63□□□□□ -1.51
NPHP3-207ENST00000476742 DUOXA2Q1HG44 320 aa5.63□□□□□ -1.51
NPHP3-207ENST00000476742 TMEM130Q8N3G9 435 aa5.63□□□□□ -1.51
NPHP3-207ENST00000476742 DUSP9Q99956 384 aaKnown RBP5.63□□□□□ -1.51
NPHP3-207ENST00000476742 C12orf49Q9H741 205 aa5.63□□□□□ -1.51
NPHP3-207ENST00000476742 AKTIPQ9H8T0 292 aa5.63□□□□□ -1.51
NPHP3-207ENST00000476742 AKAP2Q9Y2D5 859 aa5.63□□□□□ -1.51
NPHP3-207ENST00000476742 B3GALT4O96024 378 aa5.62□□□□□ -1.51
NPHP3-207ENST00000476742 EIF4BP23588 611 aaKnown RBP5.62□□□□□ -1.51
NPHP3-207ENST00000476742 PPP2R3AQ06190 1150 aa5.62□□□□□ -1.51
NPHP3-207ENST00000476742 ZNF423Q2M1K9 1284 aa5.62□□□□□ -1.51
NPHP3-207ENST00000476742 ACAD11Q709F0 780 aa5.62□□□□□ -1.51
NPHP3-207ENST00000476742 FAM8A1Q9UBU6 413 aa5.62□□□□□ -1.51
NPHP3-207ENST00000476742 F8W735 103 aaPredicted RBP5.61□□□□□ -1.51
NPHP3-207ENST00000476742 DDX3YO15523 660 aaKnown RBP5.61□□□□□ -1.51
NPHP3-207ENST00000476742 PSPNO60542 156 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 CYP11A1P05108 521 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 FSTP19883 344 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 IREB2P48200 963 aaKnown RBP5.61□□□□□ -1.51
NPHP3-207ENST00000476742 PSMD2Q13200 908 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 ZNF326Q5BKZ1 582 aaKnown RBP5.61□□□□□ -1.51
NPHP3-207ENST00000476742 HP1BP3Q5SSJ5 553 aaPredicted RBP5.61□□□□□ -1.51
NPHP3-207ENST00000476742 HGSNATQ68CP4 663 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 PRR23CQ6ZRP0 262 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 FBXO33Q7Z6M2 555 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 WFDC12Q8WWY7 111 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 ASIC4Q96FT7 647 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 BCL2L13Q9BXK5 485 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 USP26Q9BXU7 913 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 OSBPL7Q9BZF2 842 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 KCNK4Q9NYG8 393 aa5.61□□□□□ -1.51
NPHP3-207ENST00000476742 GPN3Q9UHW5 284 aaPredicted RBP5.61□□□□□ -1.51
NPHP3-207ENST00000476742 TM4SF5O14894 197 aa5.6□□□□□ -1.51
NPHP3-207ENST00000476742 ADAM11O75078 769 aa5.6□□□□□ -1.51
NPHP3-207ENST00000476742 HNRNPUQ00839 825 aaKnown RBP eCLIP5.6□□□□□ -1.51
NPHP3-207ENST00000476742 AP3B2Q13367 1082 aa5.6□□□□□ -1.51
NPHP3-207ENST00000476742 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.6□□□□□ -1.51
NPHP3-207ENST00000476742 UBASH3BQ8TF42 649 aa5.6□□□□□ -1.51
NPHP3-207ENST00000476742 FOXD4L4Q8WXT5 416 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-207ENST00000476742 CORO1BQ9BR76 489 aa5.6□□□□□ -1.51
NPHP3-207ENST00000476742 CEP44Q9C0F1 390 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms