RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 SAAL1Q96ER3 474 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 UTP14AQ9BVJ6 771 aaKnown RBP4.78□□□□□ -1.64
CD55-208ENST00000476590 KIF9Q9HAQ2 790 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 ADAM21Q9UKJ8 722 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 PRR12Q9ULL5 1215 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 IQSEC3Q9UPP2 1182 aaPredicted RBP4.78□□□□□ -1.64
CD55-208ENST00000476590 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.78□□□□□ -1.64
CD55-208ENST00000476590 KIF27Q86VH2 1401 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 PPFIA3O75145 1194 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 SASH1O94885 1247 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 FLT3P36888 993 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 TRPC1P48995 793 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 CDR1P51861 262 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 SESN3P58005 492 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 DEUP1Q05D60 604 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 PRPF4BQ13523 1007 aaKnown RBP4.78□□□□□ -1.64
CD55-208ENST00000476590 CEP135Q66GS9 1140 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 CDCA2Q69YH5 1023 aaPredicted RBP4.78□□□□□ -1.64
CD55-208ENST00000476590 FILIP1Q7Z7B0 1213 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 SDCCAG8Q86SQ7 713 aaPredicted RBP4.78□□□□□ -1.64
CD55-208ENST00000476590 NOP9Q86U38 636 aaKnown RBP4.78□□□□□ -1.64
CD55-208ENST00000476590 MIPOL1Q8TD10 442 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 ZBTB10Q96DT7 871 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 RBM17Q96I25 401 aaKnown RBP4.78□□□□□ -1.64
CD55-208ENST00000476590 C16orf45Q96MC5 204 aaPredicted RBP4.78□□□□□ -1.64
CD55-208ENST00000476590 MYO6Q9UM54 1294 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 TBX22Q9Y458 520 aa4.78□□□□□ -1.64
CD55-208ENST00000476590 ELP1O95163 1332 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 KIF7Q2M1P5 1343 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 IGHDP01880 384 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 CLNS1AP54105 237 aaKnown RBP4.77□□□□□ -1.65
CD55-208ENST00000476590 SLC8A3P57103 927 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 LAMB3Q13751 1172 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 SMC1AQ14683 1233 aaKnown RBP4.77□□□□□ -1.65
CD55-208ENST00000476590 INF2Q27J81 1249 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 C6orf132Q5T0Z8 1188 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 WLSQ5T9L3 541 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 SFMBT2Q5VUG0 894 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 RCSD1Q6JBY9 416 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 IQCA1Q86XH1 822 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 B4GALNT2Q8NHY0 566 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 KAT2BQ92831 832 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 CDCA7LQ96GN5 454 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 CABS1Q96KC9 395 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 STK31Q9BXU1 1019 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 MAGEC2Q9UBF1 373 aaPredicted RBP4.77□□□□□ -1.65
CD55-208ENST00000476590 THRAP3Q9Y2W1 955 aaKnown RBP4.77□□□□□ -1.65
CD55-208ENST00000476590 THOC2Q8NI27 1593 aaKnown RBP4.77□□□□□ -1.65
CD55-208ENST00000476590 CCDC171Q6TFL3 1326 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 SENP3-EIF4A1A0A087X0R7 540 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 EXOC5O00471 708 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 PRPF40AO75400 957 aaKnown RBP4.77□□□□□ -1.65
CD55-208ENST00000476590 CCDC175P0C221 793 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 NBPF7P0C2Y1 421 aaPredicted RBP4.77□□□□□ -1.65
CD55-208ENST00000476590 ITGB7P26010 798 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 RANBP1P43487 201 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 ZBED6P86452 979 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 SF3B2Q13435 895 aaKnown RBP4.77□□□□□ -1.65
CD55-208ENST00000476590 PLEKHO1Q53GL0 409 aaPredicted RBP4.77□□□□□ -1.65
CD55-208ENST00000476590 RRP12Q5JTH9 1297 aaKnown RBP4.77□□□□□ -1.65
CD55-208ENST00000476590 AKNAD1Q5T1N1 836 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 MYSM1Q5VVJ2 828 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 CCDC146Q8IYE0 955 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 ARL10Q8N8L6 244 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 FAM81AQ8TBF8 368 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 BICD2Q8TD16 824 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 TANGO6Q9C0B7 1094 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 IRF2BPLQ9H1B7 796 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 MMADHCQ9H3L0 296 aaPredicted RBP4.77□□□□□ -1.65
CD55-208ENST00000476590 TMEM165Q9HC07 324 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 TRPV5Q9NQA5 729 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 RGL1Q9NZL6 768 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 SPATA7Q9P0W8 599 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 SHROOM2Q13796 1616 aa4.77□□□□□ -1.65
CD55-208ENST00000476590 SYNJ1O43426 1573 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 F8VZ95 297 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 AHCYL1O43865 530 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 OPA1O60313 960 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 WDHD1O75717 1129 aaPredicted RBP4.76□□□□□ -1.65
CD55-208ENST00000476590 CYP2E1P05181 493 aaPredicted RBP4.76□□□□□ -1.65
CD55-208ENST00000476590 VDRP11473 427 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 BMP1P13497 986 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 EVA1CP58658 441 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 TPD52L1Q16890 204 aaPredicted RBP4.76□□□□□ -1.65
CD55-208ENST00000476590 KANK4Q5T7N3 995 aaPredicted RBP4.76□□□□□ -1.65
CD55-208ENST00000476590 CCDC80Q76M96 950 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 MFN1Q8IWA4 741 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 FAM114A1Q8IWE2 563 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 SLF2Q8IX21 1173 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 ZKSCAN4Q969J2 545 aaPredicted RBP4.76□□□□□ -1.65
CD55-208ENST00000476590 TSGA10Q9BZW7 698 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 ARHGEF10LQ9HCE6 1279 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 BATF3Q9NR55 127 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 PICK1Q9NRD5 415 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 IFT57Q9NWB7 429 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.76□□□□□ -1.65
CD55-208ENST00000476590 TMEM98Q9Y2Y6 226 aa4.76□□□□□ -1.65
CD55-208ENST00000476590 E2F6O75461 281 aa4.75□□□□□ -1.65
CD55-208ENST00000476590 ERLIN1O75477 346 aa4.75□□□□□ -1.65
CD55-208ENST00000476590 U2AF1L5P0DN76 240 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms