RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 A0A0C4DFX4 3053 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 AATKQ6ZMQ8 1374 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 USP31Q70CQ4 1352 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 DYNC1I1O14576 645 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 AP5Z1O43299 807 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 PRC1O43663 620 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 SNRPA1P09661 255 aaKnown RBP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 CDC25AP30304 524 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 RBM6P78332 1123 aaKnown RBP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 CTDSPL2Q05D32 466 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 SNW1Q13573 536 aaKnown RBP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 SAFBQ15424 915 aaKnown RBP eCLIP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 IMMTQ16891 758 aaKnown RBP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 TAF3Q5VWG9 929 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 ZNF622Q969S3 477 aaKnown RBP eCLIP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 PPP1R9BQ96SB3 815 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 LTBP4Q8N2S1 1624 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 XRN1Q8IZH2 1706 aaKnown RBP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 A0A1B0GUL7 405 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 SASH1O94885 1247 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 CYP21A2P08686 494 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 CCT6AP40227 531 aaKnown RBP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 TXNRD1Q16881 649 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 BEND3Q5T5X7 828 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 SMYD4Q8IYR2 804 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 ZNF396Q96N95 335 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 NAT10Q9H0A0 1025 aaKnown RBP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 SEC31BQ9NQW1 1179 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 PAG1Q9NWQ8 432 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 HDAC5Q9UQL6 1122 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 PALLDQ8WX93 1383 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 ZPR1O75312 459 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 RHOXF2BP0C7M4 288 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 ADKP55263 362 aaKnown RBP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 CCDC144BQ3MJ40 725 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 PI4K2BQ8TCG2 481 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 DHX58Q96C10 678 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 RHOXF2Q9BQY4 288 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 NAPBQ9H115 298 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 SH2B1Q9NRF2 756 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-204ENST00000476379 IQSEC2Q5JU85 1478 aa5.77□□□□□ -1.49
CCDC39-204ENST00000476379 GOLGA8AA7E2F4 631 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 SEC31AO94979 1220 aaKnown RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 TOP1P11387 765 aaKnown RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 ATP1A3P13637 1013 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 USP5P45974 858 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 TERF1P54274 439 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 SCRN1Q12765 414 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 IFIT5Q13325 482 aaKnown RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 PNOCQ13519 176 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 ANKRD1Q15327 319 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 ARHGAP29Q52LW3 1261 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 TMEM67Q5HYA8 995 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 CAGE1Q8TC20 777 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 CAPZA3Q96KX2 299 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 ALG1Q9BT22 464 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 PEAK1Q9H792 1746 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 RGPD2P0DJD1 1756 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 LETM1O95202 739 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 RPS6KB1P23443 525 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 CHRNA5P30532 468 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 ZAP70P43403 619 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 UBASH3AP57075 661 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 RNASE9P60153 205 aaKnown RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 VPS72Q15906 364 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 MCMDC2Q4G0Z9 681 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 TNNI3KQ59H18 835 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 CERS3Q8IU89 383 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 KIF18AQ8NI77 898 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 PUS7Q96PZ0 661 aaKnown RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 FBXO3Q9UK99 471 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 CLIC4Q9Y696 253 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 MRVI1Q9Y6F6 885 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 U3KPZ7 1027 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 FPGT-TNNI3KV9GXZ4 949 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 KDM6AO15550 1401 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 CRB1P82279 1406 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 F8W031 263 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 RIMBP2O15034 1052 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 DPCR1Q3MIW9 517 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 AXDND1Q5T1B0 1012 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 PROM2Q8N271 834 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 LINS1Q8NG48 757 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 FAM107BQ9H098 131 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 POLD4Q9HCU8 107 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 BCL9LQ86UU0 1499 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 RGPD5Q99666 1765 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 STARD3NLO95772 234 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 LMAN1P49257 510 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 METAP2P50579 478 aaKnown RBP eCLIP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 KIF6Q6ZMV9 814 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 C3orf67Q6ZVT6 689 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 SSH3Q8TE77 659 aa5.76□□□□□ -1.49
CCDC39-204ENST00000476379 CCDC12Q8WUD4 166 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 XPO4Q9C0E2 1151 aaKnown RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.76□□□□□ -1.49
CCDC39-204ENST00000476379 IBTKQ9P2D0 1353 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-204ENST00000476379 SYKP43405 635 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 ZSCAN25Q6NSZ9 544 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 ANO10Q9NW15 660 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms