RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 ANKRD13AQ8IZ07 590 aa16.53■□□□□ 0.24
MRPL55-228ENST00000476267 USP44Q9H0E7 712 aa16.53■□□□□ 0.24
MRPL55-228ENST00000476267 RBBP6Q7Z6E9 1792 aaKnown RBP16.53■□□□□ 0.24
MRPL55-228ENST00000476267 MYH13Q9UKX3 1938 aa16.53■□□□□ 0.24
MRPL55-228ENST00000476267 PDE8BO95263 885 aa16.52■□□□□ 0.24
MRPL55-228ENST00000476267 CRKP46108 304 aa16.52■□□□□ 0.24
MRPL55-228ENST00000476267 IREB2P48200 963 aaKnown RBP16.52■□□□□ 0.24
MRPL55-228ENST00000476267 TNFAIP1Q13829 316 aa16.52■□□□□ 0.24
MRPL55-228ENST00000476267 KLHDC4Q8TBB5 520 aa16.52■□□□□ 0.24
MRPL55-228ENST00000476267 SSH1Q8WYL5 1049 aa16.52■□□□□ 0.24
MRPL55-228ENST00000476267 PTPN18Q99952 460 aa16.52■□□□□ 0.24
MRPL55-228ENST00000476267 BRCA2P51587 3418 aa16.52■□□□□ 0.23
MRPL55-228ENST00000476267 KIF16BQ96L93 1317 aa16.51■□□□□ 0.23
MRPL55-228ENST00000476267 FGFR2P21802 821 aa16.51■□□□□ 0.23
MRPL55-228ENST00000476267 RFX5P48382 616 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-228ENST00000476267 HDLBPQ00341 1268 aaKnown RBP16.51■□□□□ 0.23
MRPL55-228ENST00000476267 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-228ENST00000476267 IQSEC3Q9UPP2 1182 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-228ENST00000476267 E9PSI1 815 aa16.5■□□□□ 0.23
MRPL55-228ENST00000476267 SLFN5Q08AF3 891 aa16.5■□□□□ 0.23
MRPL55-228ENST00000476267 METTL24Q5JXM2 366 aa16.5■□□□□ 0.23
MRPL55-228ENST00000476267 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.5■□□□□ 0.23
MRPL55-228ENST00000476267 MS4A4AQ96JQ5 239 aa16.5■□□□□ 0.23
MRPL55-228ENST00000476267 TMEM39BQ9GZU3 492 aa16.5■□□□□ 0.23
MRPL55-228ENST00000476267 TCP10L2B9ZVM9 353 aa16.49■□□□□ 0.23
MRPL55-228ENST00000476267 CAP1Q01518 475 aa16.49■□□□□ 0.23
MRPL55-228ENST00000476267 CRHR2Q13324 411 aa16.49■□□□□ 0.23
MRPL55-228ENST00000476267 OTOP1Q7RTM1 612 aa16.49■□□□□ 0.23
MRPL55-228ENST00000476267 TBC1D22AQ8WUA7 517 aa16.49■□□□□ 0.23
MRPL55-228ENST00000476267 OPTNQ96CV9 577 aa16.49■□□□□ 0.23
MRPL55-228ENST00000476267 MRIQ9BWK5 157 aa16.49■□□□□ 0.23
MRPL55-228ENST00000476267 BCAMP50895 628 aa16.48■□□□□ 0.23
MRPL55-228ENST00000476267 VGLL4Q14135 290 aa16.48■□□□□ 0.23
MRPL55-228ENST00000476267 ALDH1L2Q3SY69 923 aa16.48■□□□□ 0.23
MRPL55-228ENST00000476267 CAVIN4Q5BKX8 364 aa16.48■□□□□ 0.23
MRPL55-228ENST00000476267 TRMT2AQ8IZ69 625 aaKnown RBP16.48■□□□□ 0.23
MRPL55-228ENST00000476267 ZDHHC15Q96MV8 337 aa16.48■□□□□ 0.23
MRPL55-228ENST00000476267 ELP3Q9H9T3 547 aa16.48■□□□□ 0.23
MRPL55-228ENST00000476267 MKI67P46013 3256 aaKnown RBP16.48■□□□□ 0.23
MRPL55-228ENST00000476267 CHAF1AQ13111 956 aaPredicted RBP16.47■□□□□ 0.23
MRPL55-228ENST00000476267 PUM3Q15397 648 aaKnown RBP16.47■□□□□ 0.23
MRPL55-228ENST00000476267 APOBEC3HQ6NTF7 200 aaKnown RBP16.47■□□□□ 0.23
MRPL55-228ENST00000476267 VPS37DQ86XT2 251 aa16.47■□□□□ 0.23
MRPL55-228ENST00000476267 CNKSR2Q8WXI2 1034 aa16.47■□□□□ 0.23
MRPL55-228ENST00000476267 TEKT1Q969V4 418 aa16.47■□□□□ 0.23
MRPL55-228ENST00000476267 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.47■□□□□ 0.23
MRPL55-228ENST00000476267 RPAP1Q9BWH6 1393 aaPredicted RBP16.47■□□□□ 0.23
MRPL55-228ENST00000476267 TNNI2P48788 182 aa16.46■□□□□ 0.23
MRPL55-228ENST00000476267 CACNB3P54284 484 aa16.46■□□□□ 0.23
MRPL55-228ENST00000476267 ATG9AQ7Z3C6 839 aa16.46■□□□□ 0.23
MRPL55-228ENST00000476267 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
MRPL55-228ENST00000476267 SUGT1Q9Y2Z0 365 aa16.46■□□□□ 0.23
MRPL55-228ENST00000476267 TRIM17Q9Y577 477 aa16.46■□□□□ 0.23
MRPL55-228ENST00000476267 EYA2O00167 538 aa16.45■□□□□ 0.22
MRPL55-228ENST00000476267 FKBP1CQ5VVH2 108 aa16.45■□□□□ 0.22
MRPL55-228ENST00000476267 OTUD7BQ6GQQ9 843 aa16.45■□□□□ 0.22
MRPL55-228ENST00000476267 FAM83AQ86UY5 434 aa16.45■□□□□ 0.22
MRPL55-228ENST00000476267 BRI3BPQ8WY22 251 aa16.45■□□□□ 0.22
MRPL55-228ENST00000476267 PTPN22Q9Y2R2 807 aa16.45■□□□□ 0.22
MRPL55-228ENST00000476267 SNCAIPQ9Y6H5 919 aa16.45■□□□□ 0.22
MRPL55-228ENST00000476267 MAP3K9P80192 1104 aa16.44■□□□□ 0.22
MRPL55-228ENST00000476267 PRPF38BQ5VTL8 546 aaKnown RBP16.44■□□□□ 0.22
MRPL55-228ENST00000476267 HHIPL2Q6UWX4 724 aa16.44■□□□□ 0.22
MRPL55-228ENST00000476267 CD99L2Q8TCZ2 262 aa16.44■□□□□ 0.22
MRPL55-228ENST00000476267 ERO1AQ96HE7 468 aa16.44■□□□□ 0.22
MRPL55-228ENST00000476267 ZSWIM8A7E2V4 1837 aa16.44■□□□□ 0.22
MRPL55-228ENST00000476267 MAST3O60307 1309 aa16.44■□□□□ 0.22
MRPL55-228ENST00000476267 SPDYE5A6NIY4 337 aa16.43■□□□□ 0.22
MRPL55-228ENST00000476267 FRAT2O75474 233 aaPredicted RBP16.43■□□□□ 0.22
MRPL55-228ENST00000476267 IFIT1P09914 478 aaKnown RBP16.43■□□□□ 0.22
MRPL55-228ENST00000476267 SP3Q02447 781 aa16.43■□□□□ 0.22
MRPL55-228ENST00000476267 LPIN2Q92539 896 aa16.43■□□□□ 0.22
MRPL55-228ENST00000476267 ZBTB22O15209 634 aa16.42■□□□□ 0.22
MRPL55-228ENST00000476267 GTF2A2P52657 109 aa16.42■□□□□ 0.22
MRPL55-228ENST00000476267 FAM43AQ8N2R8 423 aa16.42■□□□□ 0.22
MRPL55-228ENST00000476267 FBXO3Q9UK99 471 aa16.42■□□□□ 0.22
MRPL55-228ENST00000476267 CCL15-CCL14A0A0B4J2E2 113 aa16.41■□□□□ 0.22
MRPL55-228ENST00000476267 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
MRPL55-228ENST00000476267 CIAO1O76071 339 aa16.41■□□□□ 0.22
MRPL55-228ENST00000476267 SLC5A1P13866 664 aa16.41■□□□□ 0.22
MRPL55-228ENST00000476267 CCL15Q16663 113 aa16.41■□□□□ 0.22
MRPL55-228ENST00000476267 ARMC5Q96C12 935 aa16.41■□□□□ 0.22
MRPL55-228ENST00000476267 OTUD5Q96G74 571 aa16.41■□□□□ 0.22
MRPL55-228ENST00000476267 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
MRPL55-228ENST00000476267 CSADQ9Y600 493 aa16.41■□□□□ 0.22
MRPL55-228ENST00000476267 CT47B1P0C2W7 299 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-228ENST00000476267 INTS3Q68E01 1043 aaKnown RBP16.4■□□□□ 0.22
MRPL55-228ENST00000476267 WDR66Q8TBY9 1149 aa16.4■□□□□ 0.22
MRPL55-228ENST00000476267 ZKSCAN4Q969J2 545 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-228ENST00000476267 WRNIP1Q96S55 665 aa16.4■□□□□ 0.22
MRPL55-228ENST00000476267 EFCC1Q9HA90 598 aa16.4■□□□□ 0.22
MRPL55-228ENST00000476267 DAGLAQ9Y4D2 1042 aa16.4■□□□□ 0.22
MRPL55-228ENST00000476267 SALL1Q9NSC2 1324 aa16.4■□□□□ 0.22
MRPL55-228ENST00000476267 DOCK2Q92608 1830 aa16.4■□□□□ 0.22
MRPL55-228ENST00000476267 PDE4DIPQ5VU43 2346 aa16.4■□□□□ 0.22
MRPL55-228ENST00000476267 PRDX5P30044 214 aa16.39■□□□□ 0.21
MRPL55-228ENST00000476267 TAF1CQ15572 869 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-228ENST00000476267 ERO1BQ86YB8 467 aa16.39■□□□□ 0.21
MRPL55-228ENST00000476267 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
MRPL55-228ENST00000476267 TMOD2Q9NZR1 351 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms