RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 IQSEC3Q9UPP2 1182 aaPredicted RBP19.89■□□□□ 0.77
CDPF1-206ENST00000475605 TESPA1A2RU30 521 aaPredicted RBP19.88■□□□□ 0.77
CDPF1-206ENST00000475605 TCP10L2B9ZVM9 353 aa19.88■□□□□ 0.77
CDPF1-206ENST00000475605 NBPF7P0C2Y1 421 aaPredicted RBP19.88■□□□□ 0.77
CDPF1-206ENST00000475605 ERO1AQ96HE7 468 aa19.88■□□□□ 0.77
CDPF1-206ENST00000475605 TMEM39BQ9GZU3 492 aa19.88■□□□□ 0.77
CDPF1-206ENST00000475605 RIPOR2Q9Y4F9 1068 aa19.88■□□□□ 0.77
CDPF1-206ENST00000475605 CRKP46108 304 aa19.87■□□□□ 0.77
CDPF1-206ENST00000475605 TNFAIP1Q13829 316 aa19.87■□□□□ 0.77
CDPF1-206ENST00000475605 OTUD7BQ6GQQ9 843 aa19.87■□□□□ 0.77
CDPF1-206ENST00000475605 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.87■□□□□ 0.77
CDPF1-206ENST00000475605 MS4A4AQ96JQ5 239 aa19.87■□□□□ 0.77
CDPF1-206ENST00000475605 PTPN22Q9Y2R2 807 aa19.87■□□□□ 0.77
CDPF1-206ENST00000475605 ARAP2Q8WZ64 1704 aa19.85■□□□□ 0.77
CDPF1-206ENST00000475605 SP3Q02447 781 aa19.85■□□□□ 0.77
CDPF1-206ENST00000475605 CHAF1AQ13111 956 aaPredicted RBP19.85■□□□□ 0.77
CDPF1-206ENST00000475605 LRRC24Q50LG9 513 aa19.85■□□□□ 0.77
CDPF1-206ENST00000475605 BRI3BPQ8WY22 251 aa19.85■□□□□ 0.77
CDPF1-206ENST00000475605 EFCC1Q9HA90 598 aa19.85■□□□□ 0.77
CDPF1-206ENST00000475605 CCER2I3L3R5 266 aa19.84■□□□□ 0.77
CDPF1-206ENST00000475605 CACNB3P54284 484 aa19.84■□□□□ 0.77
CDPF1-206ENST00000475605 VGLL4Q14135 290 aa19.84■□□□□ 0.77
CDPF1-206ENST00000475605 INTS3Q68E01 1043 aaKnown RBP19.84■□□□□ 0.77
CDPF1-206ENST00000475605 FBXO33Q7Z6M2 555 aa19.84■□□□□ 0.77
CDPF1-206ENST00000475605 BICC1Q9H694 974 aaKnown RBP19.84■□□□□ 0.77
CDPF1-206ENST00000475605 MROH5Q6ZUA9 1318 aa19.83■□□□□ 0.77
CDPF1-206ENST00000475605 MAP3K9P80192 1104 aa19.83■□□□□ 0.77
CDPF1-206ENST00000475605 UTYO14607 1347 aa19.82■□□□□ 0.76
CDPF1-206ENST00000475605 CCL15-CCL14A0A0B4J2E2 113 aa19.82■□□□□ 0.76
CDPF1-206ENST00000475605 CCL15Q16663 113 aa19.82■□□□□ 0.76
CDPF1-206ENST00000475605 VPS37DQ86XT2 251 aa19.82■□□□□ 0.76
CDPF1-206ENST00000475605 ANKRD44Q8N8A2 993 aa19.82■□□□□ 0.76
CDPF1-206ENST00000475605 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.82■□□□□ 0.76
CDPF1-206ENST00000475605 KLHDC4Q8TBB5 520 aa19.82■□□□□ 0.76
CDPF1-206ENST00000475605 OTUD5Q96G74 571 aa19.82■□□□□ 0.76
CDPF1-206ENST00000475605 HTTP42858 3142 aa19.82■□□□□ 0.76
CDPF1-206ENST00000475605 EN2P19622 333 aaPredicted RBP19.81■□□□□ 0.76
CDPF1-206ENST00000475605 TNNI2P48788 182 aa19.81■□□□□ 0.76
CDPF1-206ENST00000475605 TAF1CQ15572 869 aaPredicted RBP19.81■□□□□ 0.76
CDPF1-206ENST00000475605 RABL6Q3YEC7 729 aaPredicted RBP19.81■□□□□ 0.76
CDPF1-206ENST00000475605 METTL24Q5JXM2 366 aa19.81■□□□□ 0.76
CDPF1-206ENST00000475605 FAM43AQ8N2R8 423 aa19.81■□□□□ 0.76
CDPF1-206ENST00000475605 VGLL2Q8N8G2 317 aa19.81■□□□□ 0.76
CDPF1-206ENST00000475605 ARMC5Q96C12 935 aa19.81■□□□□ 0.76
CDPF1-206ENST00000475605 FRAT2O75474 233 aaPredicted RBP19.8■□□□□ 0.76
CDPF1-206ENST00000475605 BCAMP50895 628 aa19.8■□□□□ 0.76
CDPF1-206ENST00000475605 CSADQ9Y600 493 aa19.8■□□□□ 0.76
CDPF1-206ENST00000475605 KIAA0100Q14667 2235 aaKnown RBP19.79■□□□□ 0.76
CDPF1-206ENST00000475605 PDE8BO95263 885 aa19.79■□□□□ 0.76
CDPF1-206ENST00000475605 GTF2A2P52657 109 aa19.79■□□□□ 0.76
CDPF1-206ENST00000475605 HDLBPQ00341 1268 aaKnown RBP19.79■□□□□ 0.76
CDPF1-206ENST00000475605 CAVIN4Q5BKX8 364 aa19.79■□□□□ 0.76
CDPF1-206ENST00000475605 MRPL50Q8N5N7 158 aaKnown RBP19.79■□□□□ 0.76
CDPF1-206ENST00000475605 ZFYVE28Q9HCC9 887 aa19.79■□□□□ 0.76
CDPF1-206ENST00000475605 RBBP6Q7Z6E9 1792 aaKnown RBP19.79■□□□□ 0.76
CDPF1-206ENST00000475605 TBC1D22AQ8WUA7 517 aa19.78■□□□□ 0.76
CDPF1-206ENST00000475605 ZKSCAN4Q969J2 545 aaPredicted RBP19.78■□□□□ 0.76
CDPF1-206ENST00000475605 TEKT1Q969V4 418 aa19.78■□□□□ 0.76
CDPF1-206ENST00000475605 PTCH2Q9Y6C5 1203 aa19.78■□□□□ 0.76
CDPF1-206ENST00000475605 SNCAIPQ9Y6H5 919 aa19.78■□□□□ 0.76
CDPF1-206ENST00000475605 SPDYE5A6NIY4 337 aa19.77■□□□□ 0.76
CDPF1-206ENST00000475605 APOBEC3HQ6NTF7 200 aaKnown RBP19.77■□□□□ 0.76
CDPF1-206ENST00000475605 ZNF333Q96JL9 665 aa19.76■□□□□ 0.75
CDPF1-206ENST00000475605 ZDHHC15Q96MV8 337 aa19.76■□□□□ 0.75
CDPF1-206ENST00000475605 WRNIP1Q96S55 665 aa19.76■□□□□ 0.75
CDPF1-206ENST00000475605 ZSWIM8A7E2V4 1837 aa19.76■□□□□ 0.75
CDPF1-206ENST00000475605 CENPFP49454 3210 aa19.76■□□□□ 0.75
CDPF1-206ENST00000475605 FGFR2P21802 821 aa19.75■□□□□ 0.75
CDPF1-206ENST00000475605 HABP4Q5JVS0 413 aaKnown RBP19.75■□□□□ 0.75
CDPF1-206ENST00000475605 GCC1Q96CN9 775 aa19.75■□□□□ 0.75
CDPF1-206ENST00000475605 ARHGAP39Q9C0H5 1083 aa19.75■□□□□ 0.75
CDPF1-206ENST00000475605 MKI67P46013 3256 aaKnown RBP19.75■□□□□ 0.75
CDPF1-206ENST00000475605 ZNF521Q96K83 1311 aa19.75■□□□□ 0.75
CDPF1-206ENST00000475605 BTBD19C9JJ37 291 aa19.74■□□□□ 0.75
CDPF1-206ENST00000475605 IRF6O14896 467 aa19.74■□□□□ 0.75
CDPF1-206ENST00000475605 MYCP01106 439 aaPredicted RBP19.74■□□□□ 0.75
CDPF1-206ENST00000475605 ERO1BQ86YB8 467 aa19.74■□□□□ 0.75
CDPF1-206ENST00000475605 TMEM106CQ9BVX2 250 aa19.74■□□□□ 0.75
CDPF1-206ENST00000475605 MRIQ9BWK5 157 aa19.74■□□□□ 0.75
CDPF1-206ENST00000475605 USP44Q9H0E7 712 aa19.74■□□□□ 0.75
CDPF1-206ENST00000475605 TMOD2Q9NZR1 351 aa19.74■□□□□ 0.75
CDPF1-206ENST00000475605 TLR2O60603 784 aa19.73■□□□□ 0.75
CDPF1-206ENST00000475605 ECM2O94769 699 aaPredicted RBP19.73■□□□□ 0.75
CDPF1-206ENST00000475605 CETPP11597 493 aa19.73■□□□□ 0.75
CDPF1-206ENST00000475605 SLC9C1Q4G0N8 1177 aa19.73■□□□□ 0.75
CDPF1-206ENST00000475605 MIGA2Q7L4E1 593 aa19.73■□□□□ 0.75
CDPF1-206ENST00000475605 FAM83AQ86UY5 434 aa19.73■□□□□ 0.75
CDPF1-206ENST00000475605 MIER1Q8N108 512 aa19.73■□□□□ 0.75
CDPF1-206ENST00000475605 BRCA2P51587 3418 aa19.73■□□□□ 0.75
CDPF1-206ENST00000475605 IFIT1P09914 478 aaKnown RBP19.72■□□□□ 0.75
CDPF1-206ENST00000475605 ARHGEF6Q15052 776 aa19.72■□□□□ 0.75
CDPF1-206ENST00000475605 PUM3Q15397 648 aaKnown RBP19.72■□□□□ 0.75
CDPF1-206ENST00000475605 FKBP1CQ5VVH2 108 aa19.72■□□□□ 0.75
CDPF1-206ENST00000475605 HHIPL2Q6UWX4 724 aa19.72■□□□□ 0.75
CDPF1-206ENST00000475605 SSH1Q8WYL5 1049 aa19.72■□□□□ 0.75
CDPF1-206ENST00000475605 INPP5BP32019 993 aa19.71■□□□□ 0.75
CDPF1-206ENST00000475605 RFX5P48382 616 aaPredicted RBP19.71■□□□□ 0.75
CDPF1-206ENST00000475605 PPIL2Q13356 520 aa19.71■□□□□ 0.75
CDPF1-206ENST00000475605 SNAPC2Q13487 334 aa19.71■□□□□ 0.75
CDPF1-206ENST00000475605 SH3TC2Q8TF17 1288 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms