RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 DZIP1LQ8IYY4 767 aaKnown RBP11.36□□□□□ -0.59
SMC5-203ENST00000475540 SSBP4Q9BWG4 385 aaPredicted RBP11.36□□□□□ -0.59
SMC5-203ENST00000475540 LOC100289279A0A1B0GTE1 492 aa11.35□□□□□ -0.59
SMC5-203ENST00000475540 MEGF11A6BM72 1044 aa11.35□□□□□ -0.59
SMC5-203ENST00000475540 PPP2R3AQ06190 1150 aa11.35□□□□□ -0.59
SMC5-203ENST00000475540 POU4F3Q15319 338 aa11.35□□□□□ -0.59
SMC5-203ENST00000475540 Q6ZS46 218 aa11.35□□□□□ -0.59
SMC5-203ENST00000475540 C12orf49Q9H741 205 aa11.35□□□□□ -0.59
SMC5-203ENST00000475540 GNA15P30679 374 aa11.34□□□□□ -0.59
SMC5-203ENST00000475540 FAAP100Q0VG06 881 aa11.34□□□□□ -0.59
SMC5-203ENST00000475540 EXOSC6Q5RKV6 272 aaKnown RBP11.34□□□□□ -0.59
SMC5-203ENST00000475540 DUSP9Q99956 384 aaKnown RBP11.34□□□□□ -0.59
SMC5-203ENST00000475540 CORO1BQ9BR76 489 aa11.34□□□□□ -0.59
SMC5-203ENST00000475540 GPN3Q9UHW5 284 aaPredicted RBP11.34□□□□□ -0.59
SMC5-203ENST00000475540 SART1O43290 800 aaKnown RBP11.33□□□□□ -0.6
SMC5-203ENST00000475540 MAOBP27338 520 aa11.33□□□□□ -0.6
SMC5-203ENST00000475540 AP3B2Q13367 1082 aa11.33□□□□□ -0.6
SMC5-203ENST00000475540 HP1BP3Q5SSJ5 553 aaPredicted RBP11.33□□□□□ -0.6
SMC5-203ENST00000475540 NUTM2GQ5VZR2 741 aa11.33□□□□□ -0.6
SMC5-203ENST00000475540 TMEM39AQ9NV64 488 aa11.33□□□□□ -0.6
SMC5-203ENST00000475540 FAM8A1Q9UBU6 413 aa11.33□□□□□ -0.6
SMC5-203ENST00000475540 EIF4BP23588 611 aaKnown RBP11.32□□□□□ -0.6
SMC5-203ENST00000475540 ANKRD34AQ69YU3 496 aa11.32□□□□□ -0.6
SMC5-203ENST00000475540 FDX2Q6P4F2 183 aa11.32□□□□□ -0.6
SMC5-203ENST00000475540 C3orf58Q8NDZ4 430 aa11.32□□□□□ -0.6
SMC5-203ENST00000475540 UBL7Q96S82 380 aaPredicted RBP11.32□□□□□ -0.6
SMC5-203ENST00000475540 NRSN2Q9GZP1 204 aa11.32□□□□□ -0.6
SMC5-203ENST00000475540 CYP4F12Q9HCS2 524 aa11.32□□□□□ -0.6
SMC5-203ENST00000475540 XPCQ01831 940 aaPredicted RBP11.31□□□□□ -0.6
SMC5-203ENST00000475540 RSPO4Q2I0M5 234 aaPredicted RBP11.31□□□□□ -0.6
SMC5-203ENST00000475540 NKAPLQ5M9Q1 402 aa11.31□□□□□ -0.6
SMC5-203ENST00000475540 TMPRSS13Q9BYE2 586 aa11.31□□□□□ -0.6
SMC5-203ENST00000475540 AK5Q9Y6K8 562 aa11.31□□□□□ -0.6
SMC5-203ENST00000475540 DLGAP3O95886 979 aa11.3□□□□□ -0.6
SMC5-203ENST00000475540 H2AFB1P0C5Y9 115 aa11.3□□□□□ -0.6
SMC5-203ENST00000475540 H2AFB2P0C5Z0 115 aa11.3□□□□□ -0.6
SMC5-203ENST00000475540 C12orf50Q8NA57 414 aaPredicted RBP11.3□□□□□ -0.6
SMC5-203ENST00000475540 TRIM56Q9BRZ2 755 aaKnown RBP11.3□□□□□ -0.6
SMC5-203ENST00000475540 PARP2Q9UGN5 583 aa11.3□□□□□ -0.6
SMC5-203ENST00000475540 PPM1HQ9ULR3 514 aa11.3□□□□□ -0.6
SMC5-203ENST00000475540 K7ELQ4 463 aaPredicted RBP11.29□□□□□ -0.6
SMC5-203ENST00000475540 USP17L7P0C7H9 530 aa11.29□□□□□ -0.6
SMC5-203ENST00000475540 FBXO33Q7Z6M2 555 aa11.29□□□□□ -0.6
SMC5-203ENST00000475540 CEP44Q9C0F1 390 aa11.29□□□□□ -0.6
SMC5-203ENST00000475540 SEMA6BQ9H3T3 888 aa11.29□□□□□ -0.6
SMC5-203ENST00000475540 TRIM26Q12899 539 aaPredicted RBP11.28□□□□□ -0.6
SMC5-203ENST00000475540 UVSSAQ2YD98 709 aa11.28□□□□□ -0.6
SMC5-203ENST00000475540 SMG8Q8ND04 991 aaKnown RBP11.28□□□□□ -0.6
SMC5-203ENST00000475540 SUGCTQ9HAC7 445 aa11.28□□□□□ -0.6
SMC5-203ENST00000475540 RAD18Q9NS91 495 aa11.28□□□□□ -0.6
SMC5-203ENST00000475540 RNF19AQ9NV58 838 aa11.28□□□□□ -0.6
SMC5-203ENST00000475540 PSMD2Q13200 908 aa11.27□□□□□ -0.61
SMC5-203ENST00000475540 PDE3AQ14432 1141 aa11.27□□□□□ -0.61
SMC5-203ENST00000475540 TPTE2Q6XPS3 522 aa11.27□□□□□ -0.61
SMC5-203ENST00000475540 UTP4Q969X6 686 aaKnown RBP11.27□□□□□ -0.61
SMC5-203ENST00000475540 FAM46AQ96IP4 442 aaKnown RBP11.27□□□□□ -0.61
SMC5-203ENST00000475540 DHX15O43143 795 aaKnown RBP11.26□□□□□ -0.61
SMC5-203ENST00000475540 DYRK3O43781 588 aa11.26□□□□□ -0.61
SMC5-203ENST00000475540 DAB2P98082 770 aa11.26□□□□□ -0.61
SMC5-203ENST00000475540 NECAB3Q96P71 396 aaPredicted RBP11.26□□□□□ -0.61
SMC5-203ENST00000475540 ADAM23O75077 832 aa11.25□□□□□ -0.61
SMC5-203ENST00000475540 ECEL1O95672 775 aa11.25□□□□□ -0.61
SMC5-203ENST00000475540 CTSBP07858 339 aa11.25□□□□□ -0.61
SMC5-203ENST00000475540 MFAP1P55081 439 aaKnown RBP11.25□□□□□ -0.61
SMC5-203ENST00000475540 HNRNPUQ00839 825 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMC5-203ENST00000475540 PRR23CQ6ZRP0 262 aa11.25□□□□□ -0.61
SMC5-203ENST00000475540 ANKRD24Q8TF21 1146 aa11.25□□□□□ -0.61
SMC5-203ENST00000475540 BCL2L13Q9BXK5 485 aa11.25□□□□□ -0.61
SMC5-203ENST00000475540 EMILIN2Q9BXX0 1053 aa11.25□□□□□ -0.61
SMC5-203ENST00000475540 SAMM50Q9Y512 469 aa11.25□□□□□ -0.61
SMC5-203ENST00000475540 GAS2O43903 313 aaKnown RBP11.24□□□□□ -0.61
SMC5-203ENST00000475540 GSTP1P09211 210 aaKnown RBP11.24□□□□□ -0.61
SMC5-203ENST00000475540 PREPP48147 710 aa11.24□□□□□ -0.61
SMC5-203ENST00000475540 ARMC10Q8N2F6 343 aa11.24□□□□□ -0.61
SMC5-203ENST00000475540 ZC3H12CQ9C0D7 883 aaKnown RBP11.24□□□□□ -0.61
SMC5-203ENST00000475540 TTF2Q9UNY4 1162 aaKnown RBP11.24□□□□□ -0.61
SMC5-203ENST00000475540 FBXO24O75426 580 aa11.23□□□□□ -0.61
SMC5-203ENST00000475540 NME2P22392 152 aa11.23□□□□□ -0.61
SMC5-203ENST00000475540 ARNTP27540 789 aa11.23□□□□□ -0.61
SMC5-203ENST00000475540 TAGLNQ01995 201 aaKnown RBP11.23□□□□□ -0.61
SMC5-203ENST00000475540 SOX4Q06945 474 aaPredicted RBP11.23□□□□□ -0.61
SMC5-203ENST00000475540 ZNF326Q5BKZ1 582 aaKnown RBP11.23□□□□□ -0.61
SMC5-203ENST00000475540 TMC4Q7Z404 712 aa11.23□□□□□ -0.61
SMC5-203ENST00000475540 SULF2Q8IWU5 870 aa11.23□□□□□ -0.61
SMC5-203ENST00000475540 MYRFLQ96LU7 910 aa11.23□□□□□ -0.61
SMC5-203ENST00000475540 RAXQ9Y2V3 346 aa11.23□□□□□ -0.61
SMC5-203ENST00000475540 TIAF1O95411 115 aa11.22□□□□□ -0.61
SMC5-203ENST00000475540 BMP3P12645 472 aa11.22□□□□□ -0.61
SMC5-203ENST00000475540 DRD2P14416 443 aa11.22□□□□□ -0.61
SMC5-203ENST00000475540 ITGAEP38570 1179 aa11.22□□□□□ -0.61
SMC5-203ENST00000475540 KCNB2Q92953 911 aa11.22□□□□□ -0.61
SMC5-203ENST00000475540 CBX8Q9HC52 389 aa11.22□□□□□ -0.61
SMC5-203ENST00000475540 MRS2Q9HD23 443 aa11.22□□□□□ -0.61
SMC5-203ENST00000475540 STOML1Q9UBI4 398 aa11.22□□□□□ -0.61
SMC5-203ENST00000475540 ENC1O14682 589 aa11.21□□□□□ -0.61
SMC5-203ENST00000475540 AKAP4Q5JQC9 854 aa11.21□□□□□ -0.61
SMC5-203ENST00000475540 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.21□□□□□ -0.61
SMC5-203ENST00000475540 FAM161BQ96MY7 647 aa11.21□□□□□ -0.61
SMC5-203ENST00000475540 KRT82Q9NSB4 513 aa11.21□□□□□ -0.61
SMC5-203ENST00000475540 HIF3AQ9Y2N7 669 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms