RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 KLF15Q9UIH9 416 aa8.11□□□□□ -1.11
SDHB-205ENST00000475506 PRR12Q9ULL5 1215 aa8.11□□□□□ -1.11
SDHB-205ENST00000475506 CILPO75339 1184 aa8.1□□□□□ -1.11
SDHB-205ENST00000475506 CPB1P15086 417 aa8.1□□□□□ -1.11
SDHB-205ENST00000475506 NCLP19338 710 aaKnown RBP8.1□□□□□ -1.11
SDHB-205ENST00000475506 NME2P22392 152 aa8.1□□□□□ -1.11
SDHB-205ENST00000475506 PTPN11Q06124 597 aaPredicted RBP8.1□□□□□ -1.11
SDHB-205ENST00000475506 NEUROD1Q13562 356 aa8.1□□□□□ -1.11
SDHB-205ENST00000475506 PERM1Q5SV97 790 aa8.1□□□□□ -1.11
SDHB-205ENST00000475506 MPRIPQ6WCQ1 1025 aa8.1□□□□□ -1.11
SDHB-205ENST00000475506 GAL3ST3Q96A11 431 aa8.1□□□□□ -1.11
SDHB-205ENST00000475506 RNPC3Q96LT9 517 aaKnown RBP8.1□□□□□ -1.11
SDHB-205ENST00000475506 SRPK1Q96SB4 655 aaKnown RBP8.1□□□□□ -1.11
SDHB-205ENST00000475506 TRIM55Q9BYV6 548 aa8.1□□□□□ -1.11
SDHB-205ENST00000475506 MIR1-1HGQ9H1L0 117 aa8.1□□□□□ -1.11
SDHB-205ENST00000475506 BRMS1Q9HCU9 246 aa8.1□□□□□ -1.11
SDHB-205ENST00000475506 PHF24Q9UPV7 400 aa8.1□□□□□ -1.11
SDHB-205ENST00000475506 SIN3BO75182 1162 aa8.09□□□□□ -1.11
SDHB-205ENST00000475506 SMNDC1O75940 238 aaKnown RBP eCLIP8.09□□□□□ -1.11
SDHB-205ENST00000475506 GIPRP48546 466 aa8.09□□□□□ -1.11
SDHB-205ENST00000475506 PPP2R3AQ06190 1150 aa8.09□□□□□ -1.11
SDHB-205ENST00000475506 FAM35AQ86V20 835 aa8.09□□□□□ -1.11
SDHB-205ENST00000475506 SULF2Q8IWU5 870 aa8.09□□□□□ -1.11
SDHB-205ENST00000475506 ADAM19Q9H013 955 aa8.09□□□□□ -1.11
SDHB-205ENST00000475506 SLC6A14Q9UN76 642 aa8.09□□□□□ -1.11
SDHB-205ENST00000475506 TRIM33Q9UPN9 1127 aa8.09□□□□□ -1.11
SDHB-205ENST00000475506 CLCQ05315 142 aa8.08□□□□□ -1.12
SDHB-205ENST00000475506 MPP2Q14168 576 aa8.08□□□□□ -1.12
SDHB-205ENST00000475506 REC114Q7Z4M0 266 aa8.08□□□□□ -1.12
SDHB-205ENST00000475506 VWA5B2Q8N398 1253 aa8.08□□□□□ -1.12
SDHB-205ENST00000475506 TRIM47Q96LD4 638 aa8.08□□□□□ -1.12
SDHB-205ENST00000475506 DEPDC7Q96QD5 511 aa8.08□□□□□ -1.12
SDHB-205ENST00000475506 MDFIQ99750 246 aa8.08□□□□□ -1.12
SDHB-205ENST00000475506 KANSL2Q9H9L4 492 aa8.08□□□□□ -1.12
SDHB-205ENST00000475506 SH2B1Q9NRF2 756 aaPredicted RBP8.08□□□□□ -1.12
SDHB-205ENST00000475506 CYP8B1Q9UNU6 501 aa8.08□□□□□ -1.12
SDHB-205ENST00000475506 PPFIA3O75145 1194 aa8.07□□□□□ -1.12
SDHB-205ENST00000475506 ESRRAP11474 423 aaPredicted RBP8.07□□□□□ -1.12
SDHB-205ENST00000475506 SNRPBP14678 240 aaKnown RBP8.07□□□□□ -1.12
SDHB-205ENST00000475506 ARNTP27540 789 aa8.07□□□□□ -1.12
SDHB-205ENST00000475506 MCM4P33991 863 aa8.07□□□□□ -1.12
SDHB-205ENST00000475506 EIF6P56537 245 aaKnown RBP8.07□□□□□ -1.12
SDHB-205ENST00000475506 ZNF252P-AS1Q0IIN9 211 aa8.07□□□□□ -1.12
SDHB-205ENST00000475506 PCSK7Q16549 785 aa8.07□□□□□ -1.12
SDHB-205ENST00000475506 PDZD3Q86UT5 571 aa8.07□□□□□ -1.12
SDHB-205ENST00000475506 TNFRSF25Q93038 417 aa8.07□□□□□ -1.12
SDHB-205ENST00000475506 GPATCH3Q96I76 525 aa8.07□□□□□ -1.12
SDHB-205ENST00000475506 LPIN3Q9BQK8 851 aa8.07□□□□□ -1.12
SDHB-205ENST00000475506 LACRTQ9GZZ8 138 aa8.07□□□□□ -1.12
SDHB-205ENST00000475506 SMG9Q9H0W8 520 aaKnown RBP8.07□□□□□ -1.12
SDHB-205ENST00000475506 ZNRF3Q9ULT6 936 aa8.07□□□□□ -1.12
SDHB-205ENST00000475506 MSRB2Q9Y3D2 182 aa8.07□□□□□ -1.12
SDHB-205ENST00000475506 CDC14CA4D256 554 aa8.06□□□□□ -1.12
SDHB-205ENST00000475506 SELPP16109 830 aa8.06□□□□□ -1.12
SDHB-205ENST00000475506 PTPRAP18433 802 aa8.06□□□□□ -1.12
SDHB-205ENST00000475506 HSD3B2P26439 372 aa8.06□□□□□ -1.12
SDHB-205ENST00000475506 CWF19L2Q2TBE0 894 aaKnown RBP8.06□□□□□ -1.12
SDHB-205ENST00000475506 HGSNATQ68CP4 663 aa8.06□□□□□ -1.12
SDHB-205ENST00000475506 LLGL2Q6P1M3 1020 aa8.06□□□□□ -1.12
SDHB-205ENST00000475506 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.06□□□□□ -1.12
SDHB-205ENST00000475506 GK5Q6ZS86 529 aa8.06□□□□□ -1.12
SDHB-205ENST00000475506 ANKRD13AQ8IZ07 590 aa8.06□□□□□ -1.12
SDHB-205ENST00000475506 FERD3LQ96RJ6 166 aa8.06□□□□□ -1.12
SDHB-205ENST00000475506 RBSNQ9H1K0 784 aa8.06□□□□□ -1.12
SDHB-205ENST00000475506 TNKS2Q9H2K2 1166 aa8.06□□□□□ -1.12
SDHB-205ENST00000475506 SENP2Q9HC62 589 aa8.06□□□□□ -1.12
SDHB-205ENST00000475506 GMPR2Q9P2T1 348 aaKnown RBP8.06□□□□□ -1.12
SDHB-205ENST00000475506 POLR3KQ9Y2Y1 108 aaPredicted RBP8.06□□□□□ -1.12
SDHB-205ENST00000475506 CCDC85CA6NKD9 419 aa8.05□□□□□ -1.12
SDHB-205ENST00000475506 U2SURPO15042 1029 aaKnown RBP8.05□□□□□ -1.12
SDHB-205ENST00000475506 BMP4P12644 408 aa8.05□□□□□ -1.12
SDHB-205ENST00000475506 LMNB1P20700 586 aa8.05□□□□□ -1.12
SDHB-205ENST00000475506 CDK8P49336 464 aa8.05□□□□□ -1.12
SDHB-205ENST00000475506 FBXW10Q5XX13 1052 aa8.05□□□□□ -1.12
SDHB-205ENST00000475506 REXO1Q8N1G1 1221 aaKnown RBP8.05□□□□□ -1.12
SDHB-205ENST00000475506 MICAL1Q8TDZ2 1067 aa8.05□□□□□ -1.12
SDHB-205ENST00000475506 KIFC2Q96AC6 838 aa8.05□□□□□ -1.12
SDHB-205ENST00000475506 TRERF1Q96PN7 1200 aa8.05□□□□□ -1.12
SDHB-205ENST00000475506 CBX8Q9HC52 389 aa8.05□□□□□ -1.12
SDHB-205ENST00000475506 SAMM50Q9Y512 469 aa8.05□□□□□ -1.12
SDHB-205ENST00000475506 SOX1O00570 391 aaPredicted RBP8.04□□□□□ -1.12
SDHB-205ENST00000475506 ENPP3O14638 875 aa8.04□□□□□ -1.12
SDHB-205ENST00000475506 EPHA1P21709 976 aa8.04□□□□□ -1.12
SDHB-205ENST00000475506 ADH7P40394 386 aa8.04□□□□□ -1.12
SDHB-205ENST00000475506 ZNF165P49910 485 aa8.04□□□□□ -1.12
SDHB-205ENST00000475506 TNNI3KQ59H18 835 aa8.04□□□□□ -1.12
SDHB-205ENST00000475506 LSRQ86X29 649 aaPredicted RBP8.04□□□□□ -1.12
SDHB-205ENST00000475506 LILRB2Q8N423 598 aa8.04□□□□□ -1.12
SDHB-205ENST00000475506 ST7Q9NRC1 585 aa8.04□□□□□ -1.12
SDHB-205ENST00000475506 ADARB2-AS1A8MUL3 147 aa8.03□□□□□ -1.12
SDHB-205ENST00000475506 GAS6Q14393 721 aa8.03□□□□□ -1.12
SDHB-205ENST00000475506 LRRC14Q15048 493 aa8.03□□□□□ -1.12
SDHB-205ENST00000475506 DDR2Q16832 855 aa8.03□□□□□ -1.12
SDHB-205ENST00000475506 ELMSAN1Q6PJG2 1045 aa8.03□□□□□ -1.12
SDHB-205ENST00000475506 RUFY4Q6ZNE9 571 aa8.03□□□□□ -1.12
SDHB-205ENST00000475506 LRP10Q7Z4F1 713 aa8.03□□□□□ -1.12
SDHB-205ENST00000475506 FCHSD1Q86WN1 690 aa8.03□□□□□ -1.12
SDHB-205ENST00000475506 MICALL1Q8N3F8 863 aa8.03□□□□□ -1.12
SDHB-205ENST00000475506 RBBP8NLQ8NC74 664 aaPredicted RBP8.03□□□□□ -1.12
SDHB-205ENST00000475506 NANOS1Q8WY41 292 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms