RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 UBE2Q2LH0YL09 131 aa13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 DCAF8Q5TAQ9 597 aa13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 NAPBQ9H115 298 aa13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 LMBRD1Q9NUN5 540 aa13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 ESPNB1AK53 854 aa13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 RPS6KB1P23443 525 aa13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 APPBP2Q92624 585 aa13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 NYXQ9GZU5 481 aa13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 COL22A1Q8NFW1 1626 aaPredicted RBP13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 NRAPQ86VF7 1730 aa13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 SYT1P21579 422 aa13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 TOB2Q14106 344 aaPredicted RBP13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 NFXL1Q6ZNB6 911 aa13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 MICU3Q86XE3 530 aa13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 CWC22Q9HCG8 908 aaKnown RBP13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 SCAF8Q9UPN6 1271 aaKnown RBP13.48□□□□□ -0.25
KCNIP3-206ENST00000475491 UBR2Q8IWV8 1755 aa13.47□□□□□ -0.25
KCNIP3-206ENST00000475491 PCNTO95613 3336 aa13.47□□□□□ -0.25
KCNIP3-206ENST00000475491 HIBADHP31937 336 aaKnown RBP13.47□□□□□ -0.25
KCNIP3-206ENST00000475491 ADD2P35612 726 aa13.47□□□□□ -0.25
KCNIP3-206ENST00000475491 ST3GAL1Q11201 340 aa13.47□□□□□ -0.25
KCNIP3-206ENST00000475491 TTC14Q96N46 770 aa13.47□□□□□ -0.25
KCNIP3-206ENST00000475491 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
KCNIP3-206ENST00000475491 FOXP2O15409 715 aa13.47□□□□□ -0.25
KCNIP3-206ENST00000475491 LARP1BQ659C4 914 aaKnown RBP13.47□□□□□ -0.25
KCNIP3-206ENST00000475491 HOMEZQ8IX15 550 aa13.47□□□□□ -0.25
KCNIP3-206ENST00000475491 ZSWIM6Q9HCJ5 1215 aa13.47□□□□□ -0.25
KCNIP3-206ENST00000475491 SAP30BPQ9UHR5 308 aaKnown RBP13.47□□□□□ -0.25
KCNIP3-206ENST00000475491 FGFR2P21802 821 aa13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 PSMA5P28066 241 aa13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 ST5P78524 1137 aa13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 GPSM2P81274 684 aa13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 IMMTQ16891 758 aaKnown RBP13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 TBC1D10CQ8IV04 446 aa13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 NUP133Q8WUM0 1156 aa13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 GPR108Q9NPR9 543 aa13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 ZNF804BA4D1E1 1349 aa13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 MED23Q9ULK4 1368 aa13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 CYP2D6P10635 497 aa13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 ANAPC15P60006 121 aa13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 DNM1Q05193 864 aaKnown RBP13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 KCNQ5Q9NR82 932 aa13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.25
KCNIP3-206ENST00000475491 TMEM63CQ9P1W3 806 aa13.46□□□□□ -0.26
KCNIP3-206ENST00000475491 VGLL3A8MV65 326 aa13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 ZBTB7AO95365 584 aa13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 ZSCAN23Q3MJ62 389 aa13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 USP48Q86UV5 1035 aa13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 PRC1O43663 620 aa13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 RAD21O60216 631 aa13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 SCNN1DP51172 638 aa13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 NAA16Q6N069 864 aaPredicted RBP13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 STX6O43752 255 aa13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 RC3H1Q5TC82 1133 aaKnown RBP13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 DZIP1Q86YF9 867 aaKnown RBP13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 FTOQ9C0B1 505 aaKnown RBP eCLIP13.45□□□□□ -0.26
KCNIP3-206ENST00000475491 RANBP6O60518 1105 aaKnown RBP13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 UQCRFS1P1P0C7P4 283 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 MSNP26038 577 aaKnown RBP13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 TM4SF1P30408 202 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 MCM2P49736 904 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 CDC37L1Q7L3B6 337 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 FAM184AQ8NB25 1140 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 DBNDD1Q9H9R9 158 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 HELLSQ9NRZ9 838 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 GNL3LQ9NVN8 582 aaKnown RBP13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 ISY1Q9ULR0 285 aaKnown RBP13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 KLF18A0A0U1RQI7 1052 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 ONECUT3O60422 494 aaPredicted RBP13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 ATP2B1P20020 1258 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 NASPP49321 788 aaPredicted RBP13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 TRDNQ13061 729 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 EPB41L4AQ9HCS5 686 aaPredicted RBP13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 TJP1Q07157 1748 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 SF3B3Q15393 1217 aaKnown RBP13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 FAM47AQ5JRC9 791 aa13.44□□□□□ -0.26
KCNIP3-206ENST00000475491 GOLGA8BA8MQT2 603 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 H3BQV1 296 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 GTF2IP78347 998 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 PICALMQ13492 652 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 CAMK4Q16566 473 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 SKOR2Q2VWA4 1001 aaPredicted RBP13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 IFFO2Q5TF58 517 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 PHKBQ93100 1093 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 ATRNO75882 1429 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 SCRN1Q12765 414 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 NMT2O60551 498 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 ADD1P35611 737 aaKnown RBP13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 MECOMQ03112 1051 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 KLHL40Q2TBA0 621 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 CYB5R4Q7L1T6 521 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 IFNL3Q8IZI9 196 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 PRDM4Q9UKN5 801 aa13.43□□□□□ -0.26
KCNIP3-206ENST00000475491 BRD1O95696 1058 aa13.42□□□□□ -0.26
KCNIP3-206ENST00000475491 MRE11P49959 708 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms