RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ARMT1Q9H993 441 aa18.12■□□□□ 0.49
RPUSD3-215ENST00000475470 CARMIL3Q8ND23 1372 aa18.12■□□□□ 0.49
RPUSD3-215ENST00000475470 NFIXQ14938 502 aa18.11■□□□□ 0.49
RPUSD3-215ENST00000475470 ALX1Q15699 326 aa18.11■□□□□ 0.49
RPUSD3-215ENST00000475470 KRT27Q7Z3Y8 459 aa18.11■□□□□ 0.49
RPUSD3-215ENST00000475470 ANKRD2Q9GZV1 360 aa18.11■□□□□ 0.49
RPUSD3-215ENST00000475470 TMEM63CQ9P1W3 806 aa18.11■□□□□ 0.49
RPUSD3-215ENST00000475470 ABCF2Q9UG63 623 aa18.11■□□□□ 0.49
RPUSD3-215ENST00000475470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.11■□□□□ 0.49
RPUSD3-215ENST00000475470 FERMT3Q86UX7 667 aa18.11■□□□□ 0.49
RPUSD3-215ENST00000475470 SMARCC2Q8TAQ2 1214 aa18.11■□□□□ 0.49
RPUSD3-215ENST00000475470 IFNL3Q8IZI9 196 aa18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 NSUN7Q8NE18 718 aaKnown RBP18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 FAM84BQ96KN1 310 aaPredicted RBP18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 NBPF3Q9H094 633 aa18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 NAPBQ9H115 298 aa18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 WDR19Q8NEZ3 1342 aa18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 GNAT2P19087 354 aa18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 EVCP57679 992 aa18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 HMGN5P82970 282 aaKnown RBP18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 TBC1D10CQ8IV04 446 aa18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 SYAP1Q96A49 352 aaPredicted RBP18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 GPHNQ9NQX3 736 aaPredicted RBP18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 RAI14Q9P0K7 980 aa18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 DENND2AQ9ULE3 1009 aa18.1■□□□□ 0.49
RPUSD3-215ENST00000475470 ZMYM6O95789 1325 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 H3BQV1 296 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 TM4SF1P30408 202 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 SLC27A3Q5K4L6 730 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 IFFO2Q5TF58 517 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 CNBD1Q8NA66 436 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 NCOA5Q9HCD5 579 aaKnown RBP18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 KIF3AQ9Y496 699 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 PTPDC1A2A3K4 754 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 TRIM37O94972 964 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 CYP7A1P22680 504 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 ANTXR2P58335 489 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 PANK2Q9BZ23 570 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 NACAP1Q9BZK3 213 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 SLC4A4Q9Y6R1 1079 aa18.09■□□□□ 0.49
RPUSD3-215ENST00000475470 PNPLA7Q6ZV29 1317 aa18.08■□□□□ 0.49
RPUSD3-215ENST00000475470 CTDNEP1O95476 244 aa18.08■□□□□ 0.49
RPUSD3-215ENST00000475470 UBE2HP62256 183 aa18.08■□□□□ 0.49
RPUSD3-215ENST00000475470 KRT85P78386 507 aa18.08■□□□□ 0.49
RPUSD3-215ENST00000475470 LCORLQ8N3X6 602 aa18.08■□□□□ 0.49
RPUSD3-215ENST00000475470 GSG1L2A8MUP6 293 aa18.08■□□□□ 0.48
RPUSD3-215ENST00000475470 FBXO33Q7Z6M2 555 aa18.08■□□□□ 0.48
RPUSD3-215ENST00000475470 MIGA1Q8NAN2 632 aa18.08■□□□□ 0.48
RPUSD3-215ENST00000475470 EPB41L4AQ9HCS5 686 aaPredicted RBP18.08■□□□□ 0.48
RPUSD3-215ENST00000475470 KLF18A0A0U1RQI7 1052 aa18.07■□□□□ 0.48
RPUSD3-215ENST00000475470 SEMA3EO15041 775 aa18.07■□□□□ 0.48
RPUSD3-215ENST00000475470 PRKAB2O43741 272 aa18.07■□□□□ 0.48
RPUSD3-215ENST00000475470 TDO2P48775 406 aa18.07■□□□□ 0.48
RPUSD3-215ENST00000475470 TPRNQ4KMQ1 711 aa18.07■□□□□ 0.48
RPUSD3-215ENST00000475470 COL1A1P02452 1464 aaPredicted RBP18.06■□□□□ 0.48
RPUSD3-215ENST00000475470 SYCE3A1L190 88 aa18.06■□□□□ 0.48
RPUSD3-215ENST00000475470 KLRK1P26718 216 aa18.06■□□□□ 0.48
RPUSD3-215ENST00000475470 HIBADHP31937 336 aaKnown RBP18.06■□□□□ 0.48
RPUSD3-215ENST00000475470 TFCP2L1Q9NZI6 479 aa18.06■□□□□ 0.48
RPUSD3-215ENST00000475470 GOLGA8BA8MQT2 603 aa18.06■□□□□ 0.48
RPUSD3-215ENST00000475470 B4E1Z4 1266 aa18.06■□□□□ 0.48
RPUSD3-215ENST00000475470 DHX16O60231 1041 aaKnown RBP18.06■□□□□ 0.48
RPUSD3-215ENST00000475470 FAM173BQ6P4H8 233 aa18.06■□□□□ 0.48
RPUSD3-215ENST00000475470 TNRC6CQ9HCJ0 1690 aaKnown RBP18.05■□□□□ 0.48
RPUSD3-215ENST00000475470 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
RPUSD3-215ENST00000475470 MAGEB6P1A0A0J9YX57 407 aa18.05■□□□□ 0.48
RPUSD3-215ENST00000475470 CYB5R4Q7L1T6 521 aa18.05■□□□□ 0.48
RPUSD3-215ENST00000475470 ANGEL1Q9UNK9 670 aaKnown RBP18.05■□□□□ 0.48
RPUSD3-215ENST00000475470 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
RPUSD3-215ENST00000475470 GYS1P13807 737 aa18.04■□□□□ 0.48
RPUSD3-215ENST00000475470 CTDSPL2Q05D32 466 aa18.04■□□□□ 0.48
RPUSD3-215ENST00000475470 GRAPQ13588 217 aa18.04■□□□□ 0.48
RPUSD3-215ENST00000475470 ADGRA1Q86SQ6 560 aa18.04■□□□□ 0.48
RPUSD3-215ENST00000475470 GRAPLQ8TC17 118 aaPredicted RBP18.04■□□□□ 0.48
RPUSD3-215ENST00000475470 ZSCAN16Q9H4T2 348 aaPredicted RBP18.04■□□□□ 0.48
RPUSD3-215ENST00000475470 NEDD4P46934 1319 aa18.04■□□□□ 0.48
RPUSD3-215ENST00000475470 SALL1Q9NSC2 1324 aa18.04■□□□□ 0.48
RPUSD3-215ENST00000475470 PRR5LQ6MZQ0 368 aa18.04■□□□□ 0.48
RPUSD3-215ENST00000475470 NAA16Q6N069 864 aaPredicted RBP18.04■□□□□ 0.48
RPUSD3-215ENST00000475470 LRSAM1Q6UWE0 723 aa18.04■□□□□ 0.48
RPUSD3-215ENST00000475470 TMEM87BQ96K49 555 aa18.03■□□□□ 0.48
RPUSD3-215ENST00000475470 CNNM2Q9H8M5 875 aa18.03■□□□□ 0.48
RPUSD3-215ENST00000475470 ANKIB1Q9P2G1 1089 aa18.03■□□□□ 0.48
RPUSD3-215ENST00000475470 PPFIA3O75145 1194 aa18.03■□□□□ 0.48
RPUSD3-215ENST00000475470 FOSBP53539 338 aa18.03■□□□□ 0.48
RPUSD3-215ENST00000475470 RESTQ13127 1097 aa18.03■□□□□ 0.48
RPUSD3-215ENST00000475470 AKNAD1Q5T1N1 836 aa18.03■□□□□ 0.48
RPUSD3-215ENST00000475470 MFSD6Q6ZSS7 791 aa18.03■□□□□ 0.48
RPUSD3-215ENST00000475470 SCAND2PQ9GZW5 306 aaPredicted RBP18.03■□□□□ 0.48
RPUSD3-215ENST00000475470 INCENPQ9NQS7 918 aa18.03■□□□□ 0.48
RPUSD3-215ENST00000475470 HPS5Q9UPZ3 1129 aa18.03■□□□□ 0.48
RPUSD3-215ENST00000475470 SH2B2O14492 632 aaPredicted RBP18.02■□□□□ 0.48
RPUSD3-215ENST00000475470 CPLX1O14810 134 aa18.02■□□□□ 0.48
RPUSD3-215ENST00000475470 ST5P78524 1137 aa18.02■□□□□ 0.48
RPUSD3-215ENST00000475470 NKX2-3Q8TAU0 364 aa18.02■□□□□ 0.48
RPUSD3-215ENST00000475470 RPGRQ92834 1020 aaKnown RBP18.02■□□□□ 0.48
RPUSD3-215ENST00000475470 KRT23Q9C075 422 aa18.02■□□□□ 0.48
RPUSD3-215ENST00000475470 PDS5AQ29RF7 1337 aaKnown RBP18.02■□□□□ 0.48
RPUSD3-215ENST00000475470 SERPINB2P05120 415 aa18.02■□□□□ 0.47
RPUSD3-215ENST00000475470 NASPP49321 788 aaPredicted RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms