RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 FBXO33Q7Z6M2 555 aa31.36■■■□□ 2.61
TMEM54-205ENST00000475208 CDAN1Q8IWY9 1227 aa31.36■■■□□ 2.61
TMEM54-205ENST00000475208 ANKRD44Q8N8A2 993 aa31.36■■■□□ 2.61
TMEM54-205ENST00000475208 TEPSINQ96N21 525 aa31.36■■■□□ 2.61
TMEM54-205ENST00000475208 ELP3Q9H9T3 547 aa31.36■■■□□ 2.61
TMEM54-205ENST00000475208 TCP10L2B9ZVM9 353 aa31.35■■■□□ 2.61
TMEM54-205ENST00000475208 CHAF1AQ13111 956 aaPredicted RBP31.35■■■□□ 2.61
TMEM54-205ENST00000475208 GRIK5Q16478 980 aa31.35■■■□□ 2.61
TMEM54-205ENST00000475208 PRPF38BQ5VTL8 546 aaKnown RBP31.35■■■□□ 2.61
TMEM54-205ENST00000475208 OTOP1Q7RTM1 612 aa31.35■■■□□ 2.61
TMEM54-205ENST00000475208 MRPL50Q8N5N7 158 aaKnown RBP31.35■■■□□ 2.61
TMEM54-205ENST00000475208 CRHR2Q13324 411 aa31.34■■■□□ 2.61
TMEM54-205ENST00000475208 OPTNQ96CV9 577 aa31.34■■■□□ 2.61
TMEM54-205ENST00000475208 TMEM39BQ9GZU3 492 aa31.34■■■□□ 2.61
TMEM54-205ENST00000475208 CAVIN4Q5BKX8 364 aa31.33■■■□□ 2.61
TMEM54-205ENST00000475208 PTPN18Q99952 460 aa31.33■■■□□ 2.61
TMEM54-205ENST00000475208 TESPA1A2RU30 521 aaPredicted RBP31.32■■■□□ 2.6
TMEM54-205ENST00000475208 FRAT2O75474 233 aaPredicted RBP31.32■■■□□ 2.6
TMEM54-205ENST00000475208 TNNI2P48788 182 aa31.32■■■□□ 2.6
TMEM54-205ENST00000475208 VGLL2Q8N8G2 317 aa31.32■■■□□ 2.6
TMEM54-205ENST00000475208 TBC1D22AQ8WUA7 517 aa31.32■■■□□ 2.6
TMEM54-205ENST00000475208 ERO1AQ96HE7 468 aa31.32■■■□□ 2.6
TMEM54-205ENST00000475208 HTTP42858 3142 aa31.32■■■□□ 2.6
TMEM54-205ENST00000475208 PTPRCP08575 1304 aa31.31■■■□□ 2.6
TMEM54-205ENST00000475208 PDE8BO95263 885 aa31.31■■■□□ 2.6
TMEM54-205ENST00000475208 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.3■■■□□ 2.6
TMEM54-205ENST00000475208 KLHDC4Q8TBB5 520 aa31.3■■■□□ 2.6
TMEM54-205ENST00000475208 CD99L2Q8TCZ2 262 aa31.3■■■□□ 2.6
TMEM54-205ENST00000475208 HDLBPQ00341 1268 aaKnown RBP31.29■■■□□ 2.6
TMEM54-205ENST00000475208 CNKSR2Q8WXI2 1034 aa31.29■■■□□ 2.6
TMEM54-205ENST00000475208 VGLL4Q14135 290 aa31.28■■■□□ 2.6
TMEM54-205ENST00000475208 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.28■■■□□ 2.6
TMEM54-205ENST00000475208 TEKT1Q969V4 418 aa31.28■■■□□ 2.6
TMEM54-205ENST00000475208 MS4A4AQ96JQ5 239 aa31.28■■■□□ 2.6
TMEM54-205ENST00000475208 CACNB3P54284 484 aa31.27■■■□□ 2.6
TMEM54-205ENST00000475208 MAP3K9P80192 1104 aa31.27■■■□□ 2.6
TMEM54-205ENST00000475208 BCAMP50895 628 aa31.26■■■□□ 2.59
TMEM54-205ENST00000475208 BRI3BPQ8WY22 251 aa31.26■■■□□ 2.59
TMEM54-205ENST00000475208 SSH1Q8WYL5 1049 aa31.26■■■□□ 2.59
TMEM54-205ENST00000475208 CSADQ9Y600 493 aa31.26■■■□□ 2.59
TMEM54-205ENST00000475208 SP3Q02447 781 aa31.25■■■□□ 2.59
TMEM54-205ENST00000475208 USP44Q9H0E7 712 aa31.25■■■□□ 2.59
TMEM54-205ENST00000475208 EFCC1Q9HA90 598 aa31.25■■■□□ 2.59
TMEM54-205ENST00000475208 PTPN22Q9Y2R2 807 aa31.25■■■□□ 2.59
TMEM54-205ENST00000475208 PUM3Q15397 648 aaKnown RBP31.24■■■□□ 2.59
TMEM54-205ENST00000475208 ZDHHC15Q96MV8 337 aa31.24■■■□□ 2.59
TMEM54-205ENST00000475208 TMOD2Q9NZR1 351 aa31.24■■■□□ 2.59
TMEM54-205ENST00000475208 KIF16BQ96L93 1317 aa31.24■■■□□ 2.59
TMEM54-205ENST00000475208 CCL15-CCL14A0A0B4J2E2 113 aa31.23■■■□□ 2.59
TMEM54-205ENST00000475208 E9PSI1 815 aa31.23■■■□□ 2.59
TMEM54-205ENST00000475208 IFIT1P09914 478 aaKnown RBP31.23■■■□□ 2.59
TMEM54-205ENST00000475208 GTF2A2P52657 109 aa31.23■■■□□ 2.59
TMEM54-205ENST00000475208 CCL15Q16663 113 aa31.23■■■□□ 2.59
TMEM54-205ENST00000475208 INTS3Q68E01 1043 aaKnown RBP31.23■■■□□ 2.59
TMEM54-205ENST00000475208 OTUD5Q96G74 571 aa31.23■■■□□ 2.59
TMEM54-205ENST00000475208 MAST3O60307 1309 aa31.23■■■□□ 2.59
TMEM54-205ENST00000475208 FGFR2P21802 821 aa31.22■■■□□ 2.59
TMEM54-205ENST00000475208 CAP1Q01518 475 aa31.21■■■□□ 2.59
TMEM54-205ENST00000475208 TAF1CQ15572 869 aaPredicted RBP31.21■■■□□ 2.59
TMEM54-205ENST00000475208 MRIQ9BWK5 157 aa31.21■■■□□ 2.59
TMEM54-205ENST00000475208 SUGT1Q9Y2Z0 365 aa31.21■■■□□ 2.59
TMEM54-205ENST00000475208 POTEFA5A3E0 1075 aa31.2■■■□□ 2.59
TMEM54-205ENST00000475208 APOBEC3HQ6NTF7 200 aaKnown RBP31.2■■■□□ 2.59
TMEM54-205ENST00000475208 FAM83AQ86UY5 434 aa31.2■■■□□ 2.59
TMEM54-205ENST00000475208 SPDYE5A6NIY4 337 aa31.19■■■□□ 2.58
TMEM54-205ENST00000475208 RFX5P48382 616 aaPredicted RBP31.19■■■□□ 2.58
TMEM54-205ENST00000475208 FAM43AQ8N2R8 423 aa31.19■■■□□ 2.58
TMEM54-205ENST00000475208 ZFYVE28Q9HCC9 887 aa31.19■■■□□ 2.58
TMEM54-205ENST00000475208 SNCAIPQ9Y6H5 919 aa31.19■■■□□ 2.58
TMEM54-205ENST00000475208 EYA2O00167 538 aa31.18■■■□□ 2.58
TMEM54-205ENST00000475208 FKBP1CQ5VVH2 108 aa31.18■■■□□ 2.58
TMEM54-205ENST00000475208 ARMC5Q96C12 935 aa31.18■■■□□ 2.58
TMEM54-205ENST00000475208 WRNIP1Q96S55 665 aa31.18■■■□□ 2.58
TMEM54-205ENST00000475208 CENPFP49454 3210 aa31.17■■■□□ 2.58
TMEM54-205ENST00000475208 SLC5A1P13866 664 aa31.17■■■□□ 2.58
TMEM54-205ENST00000475208 HHIPL2Q6UWX4 724 aa31.17■■■□□ 2.58
TMEM54-205ENST00000475208 RBBP6Q7Z6E9 1792 aaKnown RBP31.16■■■□□ 2.58
TMEM54-205ENST00000475208 SLFN5Q08AF3 891 aa31.16■■■□□ 2.58
TMEM54-205ENST00000475208 LPIN2Q92539 896 aa31.16■■■□□ 2.58
TMEM54-205ENST00000475208 HOOK2Q96ED9 719 aa31.16■■■□□ 2.58
TMEM54-205ENST00000475208 RPAP1Q9BWH6 1393 aaPredicted RBP31.16■■■□□ 2.58
TMEM54-205ENST00000475208 MYH13Q9UKX3 1938 aa31.16■■■□□ 2.58
TMEM54-205ENST00000475208 ERO1BQ86YB8 467 aa31.15■■■□□ 2.58
TMEM54-205ENST00000475208 ZKSCAN4Q969J2 545 aaPredicted RBP31.15■■■□□ 2.58
TMEM54-205ENST00000475208 ALDH1L2Q3SY69 923 aa31.14■■■□□ 2.58
TMEM54-205ENST00000475208 WDR66Q8TBY9 1149 aa31.14■■■□□ 2.58
TMEM54-205ENST00000475208 SMC4Q9NTJ3 1288 aa31.14■■■□□ 2.58
TMEM54-205ENST00000475208 CETPP11597 493 aa31.13■■■□□ 2.57
TMEM54-205ENST00000475208 ARHGEF6Q15052 776 aa31.13■■■□□ 2.57
TMEM54-205ENST00000475208 DCAF15Q66K64 600 aa31.13■■■□□ 2.57
TMEM54-205ENST00000475208 PCDH10Q9P2E7 1040 aa31.13■■■□□ 2.57
TMEM54-205ENST00000475208 ATG9AQ7Z3C6 839 aa31.12■■■□□ 2.57
TMEM54-205ENST00000475208 MKI67P46013 3256 aaKnown RBP31.11■■■□□ 2.57
TMEM54-205ENST00000475208 IRF6O14896 467 aa31.11■■■□□ 2.57
TMEM54-205ENST00000475208 WDHD1O75717 1129 aaPredicted RBP31.11■■■□□ 2.57
TMEM54-205ENST00000475208 ZNF341Q9BYN7 854 aa31.11■■■□□ 2.57
TMEM54-205ENST00000475208 KIAA0100Q14667 2235 aaKnown RBP31.1■■■□□ 2.57
TMEM54-205ENST00000475208 BTBD19C9JJ37 291 aa31.1■■■□□ 2.57
TMEM54-205ENST00000475208 PPIL2Q13356 520 aa31.1■■■□□ 2.57
TMEM54-205ENST00000475208 SNAPC2Q13487 334 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms