RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 TTC22Q5TAA0 569 aa11.61□□□□□ -0.55
DDX39B-217ENST00000474961 CCDC102BQ68D86 513 aa11.61□□□□□ -0.55
DDX39B-217ENST00000474961 FBXO33Q7Z6M2 555 aa11.61□□□□□ -0.55
DDX39B-217ENST00000474961 TXNRD3Q86VQ6 643 aa11.61□□□□□ -0.55
DDX39B-217ENST00000474961 FAM84BQ96KN1 310 aaPredicted RBP11.61□□□□□ -0.55
DDX39B-217ENST00000474961 BOLA2Q9H3K6 86 aa11.61□□□□□ -0.55
DDX39B-217ENST00000474961 BCS1LQ9Y276 419 aa11.61□□□□□ -0.55
DDX39B-217ENST00000474961 CCDC88AQ3V6T2 1871 aa11.61□□□□□ -0.55
DDX39B-217ENST00000474961 MYO5AQ9Y4I1 1855 aaKnown RBP11.6□□□□□ -0.55
DDX39B-217ENST00000474961 HIBADHP31937 336 aaKnown RBP11.6□□□□□ -0.55
DDX39B-217ENST00000474961 CAVIN4Q5BKX8 364 aa11.6□□□□□ -0.55
DDX39B-217ENST00000474961 SOGA3Q5TF21 947 aa11.6□□□□□ -0.55
DDX39B-217ENST00000474961 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
DDX39B-217ENST00000474961 RTKN2Q8IZC4 609 aa11.6□□□□□ -0.55
DDX39B-217ENST00000474961 RTFDC1Q9BY42 306 aaPredicted RBP11.6□□□□□ -0.55
DDX39B-217ENST00000474961 MED23Q9ULK4 1368 aa11.59□□□□□ -0.55
DDX39B-217ENST00000474961 UQCRFS1P1P0C7P4 283 aa11.59□□□□□ -0.55
DDX39B-217ENST00000474961 GSPT1P15170 499 aaKnown RBP11.59□□□□□ -0.55
DDX39B-217ENST00000474961 ARID4AP29374 1257 aaPredicted RBP11.59□□□□□ -0.55
DDX39B-217ENST00000474961 EMP3P54852 163 aa11.59□□□□□ -0.55
DDX39B-217ENST00000474961 VPS37DQ86XT2 251 aa11.59□□□□□ -0.55
DDX39B-217ENST00000474961 SUPT20HQ8NEM7 779 aa11.59□□□□□ -0.55
DDX39B-217ENST00000474961 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.59□□□□□ -0.55
DDX39B-217ENST00000474961 ZNF512BQ96KM6 892 aaPredicted RBP11.59□□□□□ -0.55
DDX39B-217ENST00000474961 EYA3Q99504 573 aa11.59□□□□□ -0.55
DDX39B-217ENST00000474961 GNL3LQ9NVN8 582 aaKnown RBP11.59□□□□□ -0.55
DDX39B-217ENST00000474961 MYH7P12883 1935 aa11.58□□□□□ -0.55
DDX39B-217ENST00000474961 MAP4K4O95819 1239 aaPredicted RBP11.58□□□□□ -0.56
DDX39B-217ENST00000474961 MCAMP43121 646 aa11.58□□□□□ -0.56
DDX39B-217ENST00000474961 SCARF1Q14162 830 aa11.58□□□□□ -0.56
DDX39B-217ENST00000474961 WASHC4Q2M389 1173 aa11.58□□□□□ -0.56
DDX39B-217ENST00000474961 BMP2KLQ5H9B9 411 aa11.58□□□□□ -0.56
DDX39B-217ENST00000474961 ZNF804AQ7Z570 1209 aa11.58□□□□□ -0.56
DDX39B-217ENST00000474961 OXER1Q8TDS5 423 aa11.58□□□□□ -0.56
DDX39B-217ENST00000474961 PSMD1Q99460 953 aa11.58□□□□□ -0.56
DDX39B-217ENST00000474961 HAUS7Q99871 368 aa11.58□□□□□ -0.56
DDX39B-217ENST00000474961 ZC3H12CQ9C0D7 883 aaKnown RBP11.58□□□□□ -0.56
DDX39B-217ENST00000474961 TRIM6-TRIM34B2RNG4 842 aa11.57□□□□□ -0.56
DDX39B-217ENST00000474961 SDSP20132 328 aa11.57□□□□□ -0.56
DDX39B-217ENST00000474961 FKBP4Q02790 459 aaKnown RBP eCLIP11.57□□□□□ -0.56
DDX39B-217ENST00000474961 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
DDX39B-217ENST00000474961 DNAJC2Q99543 621 aaKnown RBP11.57□□□□□ -0.56
DDX39B-217ENST00000474961 CD209Q9NNX6 404 aa11.57□□□□□ -0.56
DDX39B-217ENST00000474961 SNRKQ9NRH2 765 aa11.57□□□□□ -0.56
DDX39B-217ENST00000474961 HMG20BQ9P0W2 317 aa11.57□□□□□ -0.56
DDX39B-217ENST00000474961 IQSEC3Q9UPP2 1182 aaPredicted RBP11.57□□□□□ -0.56
DDX39B-217ENST00000474961 NDUFB9Q9Y6M9 179 aa11.57□□□□□ -0.56
DDX39B-217ENST00000474961 SBF1O95248 1867 aa11.56□□□□□ -0.56
DDX39B-217ENST00000474961 ZAP70P43403 619 aa11.56□□□□□ -0.56
DDX39B-217ENST00000474961 RASGRF1Q13972 1273 aa11.56□□□□□ -0.56
DDX39B-217ENST00000474961 PI16Q6UXB8 463 aa11.56□□□□□ -0.56
DDX39B-217ENST00000474961 SPATA5Q8NB90 893 aa11.56□□□□□ -0.56
DDX39B-217ENST00000474961 TDRD7Q8NHU6 1098 aaKnown RBP11.56□□□□□ -0.56
DDX39B-217ENST00000474961 RILPL2Q969X0 211 aa11.56□□□□□ -0.56
DDX39B-217ENST00000474961 MARVELD3Q96A59 401 aa11.56□□□□□ -0.56
DDX39B-217ENST00000474961 EDC3Q96F86 508 aaKnown RBP11.56□□□□□ -0.56
DDX39B-217ENST00000474961 COA1Q9GZY4 146 aa11.56□□□□□ -0.56
DDX39B-217ENST00000474961 DENND2AQ9ULE3 1009 aa11.56□□□□□ -0.56
DDX39B-217ENST00000474961 DOCK2Q92608 1830 aa11.56□□□□□ -0.56
DDX39B-217ENST00000474961 NFKBIEO00221 500 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 GOLIM4O00461 696 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 SEMA3EO15041 775 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 PPIP5K2O43314 1243 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 FRAT2O75474 233 aaPredicted RBP11.55□□□□□ -0.56
DDX39B-217ENST00000474961 CYP2E1P05181 493 aaPredicted RBP11.55□□□□□ -0.56
DDX39B-217ENST00000474961 IL1R1P14778 569 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 KIAA2012Q0VF49 1180 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 AOC3Q16853 763 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 CNTROBQ8N137 903 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 EVI5LQ96CN4 794 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 TAOK3Q9H2K8 898 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 ZNF277Q9NRM2 450 aaPredicted RBP11.55□□□□□ -0.56
DDX39B-217ENST00000474961 PAG1Q9NWQ8 432 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 SCN9AQ15858 1988 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 COL1A1P02452 1464 aaPredicted RBP11.55□□□□□ -0.56
DDX39B-217ENST00000474961 PSME4Q14997 1843 aa11.55□□□□□ -0.56
DDX39B-217ENST00000474961 DICER1Q9UPY3 1922 aaKnown RBP11.54□□□□□ -0.56
DDX39B-217ENST00000474961 NUDT7P0C024 238 aa11.54□□□□□ -0.56
DDX39B-217ENST00000474961 IARSP41252 1262 aaKnown RBP11.54□□□□□ -0.56
DDX39B-217ENST00000474961 CHAF1AQ13111 956 aaPredicted RBP11.54□□□□□ -0.56
DDX39B-217ENST00000474961 LCE2DQ5TA82 110 aaPredicted RBP11.54□□□□□ -0.56
DDX39B-217ENST00000474961 ARHGAP27Q6ZUM4 889 aa11.54□□□□□ -0.56
DDX39B-217ENST00000474961 VPS33BQ9H267 617 aa11.54□□□□□ -0.56
DDX39B-217ENST00000474961 ANTXR1Q9H6X2 564 aa11.54□□□□□ -0.56
DDX39B-217ENST00000474961 DBNDD1Q9H9R9 158 aa11.54□□□□□ -0.56
DDX39B-217ENST00000474961 PDS5AQ29RF7 1337 aaKnown RBP11.54□□□□□ -0.56
DDX39B-217ENST00000474961 LTBP3Q9NS15 1303 aa11.54□□□□□ -0.56
DDX39B-217ENST00000474961 ZNF646O15015 1829 aaPredicted RBP11.53□□□□□ -0.56
DDX39B-217ENST00000474961 POTEMA6NI47 508 aa11.53□□□□□ -0.56
DDX39B-217ENST00000474961 ECE2O60344 883 aa11.53□□□□□ -0.56
DDX39B-217ENST00000474961 YBX3P16989 372 aaKnown RBP eCLIP11.53□□□□□ -0.56
DDX39B-217ENST00000474961 RASSF7Q02833 373 aa11.53□□□□□ -0.56
DDX39B-217ENST00000474961 TBC1D9Q6ZT07 1266 aa11.53□□□□□ -0.56
DDX39B-217ENST00000474961 PODNQ7Z5L7 613 aa11.53□□□□□ -0.56
DDX39B-217ENST00000474961 LARGE2Q8N3Y3 721 aa11.53□□□□□ -0.56
DDX39B-217ENST00000474961 KBTBD3Q8NAB2 608 aa11.53□□□□□ -0.56
DDX39B-217ENST00000474961 PIH1D3Q9NQM4 214 aaKnown RBP11.53□□□□□ -0.56
DDX39B-217ENST00000474961 COL4A5P29400 1685 aa11.52□□□□□ -0.56
DDX39B-217ENST00000474961 TTF1Q15361 905 aaPredicted RBP11.52□□□□□ -0.57
DDX39B-217ENST00000474961 POTEGQ6S5H5 508 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms