RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 GPTP24298 496 aa24.8■■□□□ 1.56
SH3D21-202ENST00000474766 MRVI1Q9Y6F6 885 aa24.8■■□□□ 1.56
SH3D21-202ENST00000474766 EYA2O00167 538 aa24.79■■□□□ 1.56
SH3D21-202ENST00000474766 PDCP20941 246 aa24.79■■□□□ 1.56
SH3D21-202ENST00000474766 TYRO3Q06418 890 aa24.79■■□□□ 1.56
SH3D21-202ENST00000474766 DDX46Q7L014 1031 aaKnown RBP24.79■■□□□ 1.56
SH3D21-202ENST00000474766 TCEANC2Q96MN5 208 aa24.79■■□□□ 1.56
SH3D21-202ENST00000474766 MORC2Q9Y6X9 1032 aaPredicted RBP24.79■■□□□ 1.56
SH3D21-202ENST00000474766 CHGBP05060 677 aa24.79■■□□□ 1.56
SH3D21-202ENST00000474766 KRT85P78386 507 aa24.79■■□□□ 1.56
SH3D21-202ENST00000474766 LARP1BQ659C4 914 aaKnown RBP24.79■■□□□ 1.56
SH3D21-202ENST00000474766 SEC62Q99442 399 aaKnown RBP24.79■■□□□ 1.56
SH3D21-202ENST00000474766 HSP90AB3PQ58FF7 597 aa24.78■■□□□ 1.56
SH3D21-202ENST00000474766 RBM43Q6ZSC3 357 aaKnown RBP24.78■■□□□ 1.56
SH3D21-202ENST00000474766 PLA2G4DQ86XP0 818 aa24.78■■□□□ 1.56
SH3D21-202ENST00000474766 NEK1Q96PY6 1258 aa24.78■■□□□ 1.56
SH3D21-202ENST00000474766 DTNBO60941 627 aa24.78■■□□□ 1.56
SH3D21-202ENST00000474766 PRR5LQ6MZQ0 368 aa24.78■■□□□ 1.56
SH3D21-202ENST00000474766 CCDC129Q6ZRS4 1044 aa24.78■■□□□ 1.56
SH3D21-202ENST00000474766 CCDC24Q8N4L8 307 aa24.78■■□□□ 1.56
SH3D21-202ENST00000474766 VPS37CA5D8V6 355 aaPredicted RBP24.77■■□□□ 1.56
SH3D21-202ENST00000474766 CAVIN2O95810 425 aa24.77■■□□□ 1.56
SH3D21-202ENST00000474766 TIMM10P62072 90 aa24.77■■□□□ 1.56
SH3D21-202ENST00000474766 TRIM28Q13263 835 aaKnown RBP24.77■■□□□ 1.56
SH3D21-202ENST00000474766 CCDC186Q7Z3E2 898 aa24.77■■□□□ 1.56
SH3D21-202ENST00000474766 NEUROD6Q96NK8 337 aa24.77■■□□□ 1.56
SH3D21-202ENST00000474766 HELLSQ9NRZ9 838 aa24.77■■□□□ 1.56
SH3D21-202ENST00000474766 PAG1Q9NWQ8 432 aa24.77■■□□□ 1.56
SH3D21-202ENST00000474766 CYP21A2P08686 494 aa24.76■■□□□ 1.55
SH3D21-202ENST00000474766 TNNT1P13805 278 aa24.76■■□□□ 1.55
SH3D21-202ENST00000474766 LRRC24Q50LG9 513 aa24.76■■□□□ 1.55
SH3D21-202ENST00000474766 NLRP10Q86W26 655 aa24.76■■□□□ 1.55
SH3D21-202ENST00000474766 CCDC112Q8NEF3 446 aa24.76■■□□□ 1.55
SH3D21-202ENST00000474766 TDRD7Q8NHU6 1098 aaKnown RBP24.76■■□□□ 1.55
SH3D21-202ENST00000474766 DDX19AQ9NUU7 478 aaKnown RBP24.76■■□□□ 1.55
SH3D21-202ENST00000474766 CDC25BP30305 580 aa24.76■■□□□ 1.55
SH3D21-202ENST00000474766 ZNF75DP51815 510 aa24.76■■□□□ 1.55
SH3D21-202ENST00000474766 NBPF5PQ86XG9 351 aaPredicted RBP24.76■■□□□ 1.55
SH3D21-202ENST00000474766 FAM193AP78312 1265 aa24.75■■□□□ 1.55
SH3D21-202ENST00000474766 ZSCAN25Q6NSZ9 544 aa24.75■■□□□ 1.55
SH3D21-202ENST00000474766 CNBD1Q8NA66 436 aa24.75■■□□□ 1.55
SH3D21-202ENST00000474766 SUSD4Q5VX71 490 aa24.74■■□□□ 1.55
SH3D21-202ENST00000474766 ZNF771Q7L3S4 317 aaPredicted RBP24.74■■□□□ 1.55
SH3D21-202ENST00000474766 ZNF594Q96JF6 807 aaPredicted RBP24.74■■□□□ 1.55
SH3D21-202ENST00000474766 SPEF2Q9C093 1822 aa24.74■■□□□ 1.55
SH3D21-202ENST00000474766 GOLIM4O00461 696 aa24.74■■□□□ 1.55
SH3D21-202ENST00000474766 ZMYM1Q5SVZ6 1142 aa24.74■■□□□ 1.55
SH3D21-202ENST00000474766 CDC37L1Q7L3B6 337 aa24.74■■□□□ 1.55
SH3D21-202ENST00000474766 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.74■■□□□ 1.55
SH3D21-202ENST00000474766 CBX8Q9HC52 389 aa24.74■■□□□ 1.55
SH3D21-202ENST00000474766 NEMFO60524 1076 aa24.73■■□□□ 1.55
SH3D21-202ENST00000474766 TTC6Q86TZ1 520 aa24.73■■□□□ 1.55
SH3D21-202ENST00000474766 GTF3C6Q969F1 213 aa24.73■■□□□ 1.55
SH3D21-202ENST00000474766 DSCC1Q9BVC3 393 aa24.73■■□□□ 1.55
SH3D21-202ENST00000474766 SCAND2PQ9GZW5 306 aaPredicted RBP24.73■■□□□ 1.55
SH3D21-202ENST00000474766 FBXO3Q9UK99 471 aa24.73■■□□□ 1.55
SH3D21-202ENST00000474766 BRCA1P38398 1863 aaKnown RBP24.73■■□□□ 1.55
SH3D21-202ENST00000474766 A0A1B0GUL7 405 aa24.73■■□□□ 1.55
SH3D21-202ENST00000474766 LUZP1Q86V48 1076 aa24.73■■□□□ 1.55
SH3D21-202ENST00000474766 C16orf45Q96MC5 204 aaPredicted RBP24.73■■□□□ 1.55
SH3D21-202ENST00000474766 TNMDQ9H2S6 317 aa24.73■■□□□ 1.55
SH3D21-202ENST00000474766 UTRNP46939 3433 aa24.72■■□□□ 1.55
SH3D21-202ENST00000474766 COL11A2P13942 1736 aaPredicted RBP24.72■■□□□ 1.55
SH3D21-202ENST00000474766 PUS3Q9BZE2 481 aaKnown RBP24.72■■□□□ 1.55
SH3D21-202ENST00000474766 TPRNQ4KMQ1 711 aa24.71■■□□□ 1.55
SH3D21-202ENST00000474766 PARP10Q53GL7 1025 aa24.71■■□□□ 1.55
SH3D21-202ENST00000474766 KIF18AQ8NI77 898 aa24.71■■□□□ 1.55
SH3D21-202ENST00000474766 PLA2G12BQ9BX93 195 aa24.71■■□□□ 1.55
SH3D21-202ENST00000474766 TNRC6CQ9HCJ0 1690 aaKnown RBP24.71■■□□□ 1.55
SH3D21-202ENST00000474766 DLEC1Q9Y238 1755 aa24.71■■□□□ 1.55
SH3D21-202ENST00000474766 A0A0G2JLW4 131 aa24.71■■□□□ 1.55
SH3D21-202ENST00000474766 NPHP1O15259 732 aa24.71■■□□□ 1.55
SH3D21-202ENST00000474766 NTSR2O95665 410 aa24.71■■□□□ 1.55
SH3D21-202ENST00000474766 HMGB1P09429 215 aaKnown RBP24.71■■□□□ 1.55
SH3D21-202ENST00000474766 SLFN14P0C7P3 912 aa24.71■■□□□ 1.55
SH3D21-202ENST00000474766 Q6ZUG5 572 aa24.71■■□□□ 1.55
SH3D21-202ENST00000474766 DRC7Q8IY82 874 aa24.71■■□□□ 1.55
SH3D21-202ENST00000474766 ABCC12Q96J65 1359 aa24.7■■□□□ 1.54
SH3D21-202ENST00000474766 PCCAP05165 728 aaPredicted RBP24.7■■□□□ 1.54
SH3D21-202ENST00000474766 TGFB2P61812 414 aa24.7■■□□□ 1.54
SH3D21-202ENST00000474766 ANO6Q4KMQ2 910 aa24.7■■□□□ 1.54
SH3D21-202ENST00000474766 TPTE2Q6XPS3 522 aa24.7■■□□□ 1.54
SH3D21-202ENST00000474766 STOX1Q6ZVD7 989 aa24.7■■□□□ 1.54
SH3D21-202ENST00000474766 CREBRFQ8IUR6 639 aa24.7■■□□□ 1.54
SH3D21-202ENST00000474766 TRIM5Q9C035 493 aa24.7■■□□□ 1.54
SH3D21-202ENST00000474766 CLSTN2Q9H4D0 955 aa24.7■■□□□ 1.54
SH3D21-202ENST00000474766 IFIT1P09914 478 aaKnown RBP24.69■■□□□ 1.54
SH3D21-202ENST00000474766 DPEP1P16444 411 aa24.69■■□□□ 1.54
SH3D21-202ENST00000474766 LIG1P18858 919 aa24.69■■□□□ 1.54
SH3D21-202ENST00000474766 CEP126Q9P2H0 1117 aa24.69■■□□□ 1.54
SH3D21-202ENST00000474766 CHRNA5P30532 468 aa24.69■■□□□ 1.54
SH3D21-202ENST00000474766 ST5P78524 1137 aa24.69■■□□□ 1.54
SH3D21-202ENST00000474766 LRMPQ12912 555 aa24.69■■□□□ 1.54
SH3D21-202ENST00000474766 STK3Q13188 491 aa24.69■■□□□ 1.54
SH3D21-202ENST00000474766 CCDC57Q2TAC2 916 aa24.69■■□□□ 1.54
SH3D21-202ENST00000474766 SYNE4Q8N205 404 aa24.69■■□□□ 1.54
SH3D21-202ENST00000474766 ZNF397Q8NF99 534 aaPredicted RBP24.69■■□□□ 1.54
SH3D21-202ENST00000474766 WWC3Q9ULE0 1092 aa24.69■■□□□ 1.54
SH3D21-202ENST00000474766 RNF113AO15541 343 aaKnown RBP24.68■■□□□ 1.54
SH3D21-202ENST00000474766 KCNA3P22001 575 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms