RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 ATCAYQ86WG3 371 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 CEP120Q8N960 986 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 CCER1Q8TC90 406 aaPredicted RBP2.01□□□□□ -2.09
HDAC9-222ENST00000474742 PI4K2BQ8TCG2 481 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 ASAP3Q8TDY4 903 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 TMEM40Q8WWA1 233 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 FAM84AQ96KN4 292 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 ELP3Q9H9T3 547 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 LGR6Q9HBX8 967 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 DAGLAQ9Y4D2 1042 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 LOC100289279A0A1B0GTE1 492 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 B8ZZF3 427 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 SOX1O00570 391 aaPredicted RBP2□□□□□ -2.09
HDAC9-222ENST00000474742 TRPA1O75762 1119 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 KIF4AO95239 1232 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 RPLP1P05386 114 aaKnown RBP2□□□□□ -2.09
HDAC9-222ENST00000474742 MLANAQ16655 118 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 KRTAP19-4Q3LI73 84 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 C8orf34Q49A92 452 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 CYP27C1Q4G0S4 372 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 PDE12Q6L8Q7 609 aaKnown RBP2□□□□□ -2.09
HDAC9-222ENST00000474742 MPZL3Q6UWV2 235 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 ADAMTSL4Q6UY14 1074 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 ZNF574Q6ZN55 896 aaPredicted RBP2□□□□□ -2.09
HDAC9-222ENST00000474742 ATG4DQ86TL0 474 aaPredicted RBP2□□□□□ -2.09
HDAC9-222ENST00000474742 ANKLE2Q86XL3 938 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 SHISA5Q8N114 240 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 ABTB2Q8N961 1025 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 GTF3C2Q8WUA4 911 aaPredicted RBP2□□□□□ -2.09
HDAC9-222ENST00000474742 BCL7CQ8WUZ0 217 aaPredicted RBP2□□□□□ -2.09
HDAC9-222ENST00000474742 BSNDQ8WZ55 320 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 PMEPA1Q969W9 287 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 MISP3Q96FF7 219 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 TMPRSS13Q9BYE2 586 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 SUGCTQ9HAC7 445 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 ZFYVE1Q9HBF4 777 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 FAM53CQ9NYF3 392 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 AP4E1Q9UPM8 1137 aa2□□□□□ -2.09
HDAC9-222ENST00000474742 A6NHS1 94 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 PRRG2O14669 202 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 FZD6O60353 706 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 TIAF1O95411 115 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 ADH5P11766 374 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 ACPPP15309 386 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 NPR3P17342 541 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 MPSTP25325 297 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 ASPAP45381 313 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 SERPINB4P48594 390 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 DNM1Q05193 864 aaKnown RBP1.99□□□□□ -2.09
HDAC9-222ENST00000474742 BNIP3Q12983 259 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 ZNF211Q13398 564 aaPredicted RBP1.99□□□□□ -2.09
HDAC9-222ENST00000474742 AAMPQ13685 434 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 KCNMB1Q16558 191 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 LCE4AQ5TA78 99 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 HGSNATQ68CP4 663 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 SPRED2Q7Z698 418 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 TXNDC2Q86VQ3 553 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 LRRC56Q8IYG6 542 aaPredicted RBP1.99□□□□□ -2.09
HDAC9-222ENST00000474742 C1orf127Q8N9H9 656 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 C2CD4AQ8NCU7 369 aaPredicted RBP1.99□□□□□ -2.09
HDAC9-222ENST00000474742 DDX54Q8TDD1 881 aaKnown RBP1.99□□□□□ -2.09
HDAC9-222ENST00000474742 HELQQ8TDG4 1101 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 NUDT16Q96DE0 195 aaKnown RBP1.99□□□□□ -2.09
HDAC9-222ENST00000474742 PPP1R16BQ96T49 567 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 OSMRQ99650 979 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 GGNBP2Q9H3C7 697 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 ANO2Q9NQ90 1003 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 DZANK1Q9NVP4 752 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 TMEM63CQ9P1W3 806 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 STIM2Q9P246 746 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 ACTL7BQ9Y614 415 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 CARMIL2Q6F5E8 1435 aa1.99□□□□□ -2.09
HDAC9-222ENST00000474742 NCANO14594 1321 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP1.98□□□□□ -2.09
HDAC9-222ENST00000474742 NFIBO00712 420 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 TM4SF5O14894 197 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 IGHA2P01877 340 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 CYP11A1P05108 521 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 RNASE1P07998 156 aaKnown RBP1.98□□□□□ -2.09
HDAC9-222ENST00000474742 ZSCAN22P10073 491 aaPredicted RBP1.98□□□□□ -2.09
HDAC9-222ENST00000474742 EDN3P14138 238 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 FUT4P22083 530 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 MAOBP27338 520 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 EIF1AXP47813 144 aaKnown RBP1.98□□□□□ -2.09
HDAC9-222ENST00000474742 ARHGAP4P98171 946 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 PDE3AQ14432 1141 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 COL19A1Q14993 1142 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 POU4F3Q15319 338 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 ANGEL2Q5VTE6 544 aaKnown RBP1.98□□□□□ -2.09
HDAC9-222ENST00000474742 OGFOD3Q6PK18 319 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 NFXL1Q6ZNB6 911 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 ZSWIM9Q86XI8 627 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 PLD6Q8N2A8 252 aaKnown RBP1.98□□□□□ -2.09
HDAC9-222ENST00000474742 TMEM102Q8N9M5 508 aaPredicted RBP1.98□□□□□ -2.09
HDAC9-222ENST00000474742 FAM181AQ8N9Y4 354 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 NETO1Q8TDF5 533 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 CORO1BQ9BR76 489 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 KRTAP4-11Q9BYQ6 195 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 SEMA6CQ9H3T2 930 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 PIDD1Q9HB75 910 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms