RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 RILPL2Q969X0 211 aa12.15□□□□□ -0.46
COL8A1-206ENST00000474648 MFSD14BQ5SR56 506 aa12.14□□□□□ -0.47
COL8A1-206ENST00000474648 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
COL8A1-206ENST00000474648 CNTROBQ8N137 903 aa12.14□□□□□ -0.47
COL8A1-206ENST00000474648 GMLQ99445 158 aa12.14□□□□□ -0.47
COL8A1-206ENST00000474648 RNF181Q9P0P0 153 aa12.14□□□□□ -0.47
COL8A1-206ENST00000474648 ABCF2Q9UG63 623 aa12.14□□□□□ -0.47
COL8A1-206ENST00000474648 PRDX5P30044 214 aa12.13□□□□□ -0.47
COL8A1-206ENST00000474648 SLFNL1Q499Z3 407 aa12.13□□□□□ -0.47
COL8A1-206ENST00000474648 SPTY2D1Q68D10 685 aaPredicted RBP12.13□□□□□ -0.47
COL8A1-206ENST00000474648 CIAPIN1Q6FI81 312 aa12.13□□□□□ -0.47
COL8A1-206ENST00000474648 RSBN1LQ6PCB5 846 aaPredicted RBP12.13□□□□□ -0.47
COL8A1-206ENST00000474648 ERICH6Q7L0X2 663 aa12.13□□□□□ -0.47
COL8A1-206ENST00000474648 TICAM2Q86XR7 235 aa12.13□□□□□ -0.47
COL8A1-206ENST00000474648 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
COL8A1-206ENST00000474648 FBXW7Q969H0 707 aa12.13□□□□□ -0.47
COL8A1-206ENST00000474648 LRP2BPQ9P2M1 347 aa12.13□□□□□ -0.47
COL8A1-206ENST00000474648 AKAP11Q9UKA4 1901 aa12.13□□□□□ -0.47
COL8A1-206ENST00000474648 ZNF541Q9H0D2 1346 aa12.12□□□□□ -0.47
COL8A1-206ENST00000474648 TCRBV5S4A2TA0A5A2 114 aa12.12□□□□□ -0.47
COL8A1-206ENST00000474648 RNF113AO15541 343 aaKnown RBP12.12□□□□□ -0.47
COL8A1-206ENST00000474648 IGSF3O75054 1194 aa12.12□□□□□ -0.47
COL8A1-206ENST00000474648 IDH1O75874 414 aaKnown RBP12.12□□□□□ -0.47
COL8A1-206ENST00000474648 LDHBP07195 334 aaKnown RBP12.12□□□□□ -0.47
COL8A1-206ENST00000474648 CHMLP26374 656 aa12.12□□□□□ -0.47
COL8A1-206ENST00000474648 EIF6P56537 245 aaKnown RBP12.12□□□□□ -0.47
COL8A1-206ENST00000474648 MECOMQ03112 1051 aa12.12□□□□□ -0.47
COL8A1-206ENST00000474648 MAP3K12Q12852 859 aa12.12□□□□□ -0.47
COL8A1-206ENST00000474648 TNIP1Q15025 636 aa12.12□□□□□ -0.47
COL8A1-206ENST00000474648 ZGPATQ8N5A5 531 aaKnown RBP12.12□□□□□ -0.47
COL8A1-206ENST00000474648 NSUN4Q96CB9 384 aaKnown RBP12.12□□□□□ -0.47
COL8A1-206ENST00000474648 FSD1Q9BTV5 496 aa12.12□□□□□ -0.47
COL8A1-206ENST00000474648 RAI14Q9P0K7 980 aa12.12□□□□□ -0.47
COL8A1-206ENST00000474648 SUGT1Q9Y2Z0 365 aa12.12□□□□□ -0.47
COL8A1-206ENST00000474648 CHD4Q14839 1912 aa12.11□□□□□ -0.47
COL8A1-206ENST00000474648 PDE6AP16499 860 aa12.11□□□□□ -0.47
COL8A1-206ENST00000474648 ADD2P35612 726 aa12.11□□□□□ -0.47
COL8A1-206ENST00000474648 NUBP1P53384 320 aa12.11□□□□□ -0.47
COL8A1-206ENST00000474648 SLC9C2Q5TAH2 1124 aa12.11□□□□□ -0.47
COL8A1-206ENST00000474648 MAGEB6Q8N7X4 407 aa12.11□□□□□ -0.47
COL8A1-206ENST00000474648 MRIQ9BWK5 157 aa12.11□□□□□ -0.47
COL8A1-206ENST00000474648 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
COL8A1-206ENST00000474648 UBE3CQ15386 1083 aa12.1□□□□□ -0.47
COL8A1-206ENST00000474648 ZMYM1Q5SVZ6 1142 aa12.1□□□□□ -0.47
COL8A1-206ENST00000474648 ADGRA1Q86SQ6 560 aa12.1□□□□□ -0.47
COL8A1-206ENST00000474648 AGBL3Q8NEM8 1001 aa12.1□□□□□ -0.47
COL8A1-206ENST00000474648 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
COL8A1-206ENST00000474648 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.1□□□□□ -0.47
COL8A1-206ENST00000474648 UTRNP46939 3433 aa12.1□□□□□ -0.47
COL8A1-206ENST00000474648 SCN9AQ15858 1988 aa12.1□□□□□ -0.47
COL8A1-206ENST00000474648 ZNF532Q9HCE3 1301 aa12.1□□□□□ -0.47
COL8A1-206ENST00000474648 RFX7Q2KHR2 1363 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 F8W031 263 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-206ENST00000474648 CDC45O75419 566 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 ZFYP08048 801 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-206ENST00000474648 CYP7A1P22680 504 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 RPS12P25398 132 aaKnown RBP12.09□□□□□ -0.47
COL8A1-206ENST00000474648 GMPSP49915 693 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-206ENST00000474648 NMIQ13287 307 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-206ENST00000474648 DIXDC1Q155Q3 683 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-206ENST00000474648 ZSCAN25Q6NSZ9 544 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 TMED8Q6PL24 325 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-206ENST00000474648 KIAA0825Q8IV33 1275 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 GPC2Q8N158 579 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 DPF2Q92785 391 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 OSBP2Q969R2 916 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 FAM227BQ96M60 508 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 SEC62Q99442 399 aaKnown RBP12.09□□□□□ -0.47
COL8A1-206ENST00000474648 IL25Q9H293 177 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 TTF2Q9UNY4 1162 aaKnown RBP12.09□□□□□ -0.47
COL8A1-206ENST00000474648 GJA3Q9Y6H8 435 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 MYO3BQ8WXR4 1341 aa12.09□□□□□ -0.47
COL8A1-206ENST00000474648 A0A0D9SFI3 127 aa12.08□□□□□ -0.48
COL8A1-206ENST00000474648 SHTN1A0MZ66 631 aa12.08□□□□□ -0.48
COL8A1-206ENST00000474648 HIP1O00291 1037 aa12.08□□□□□ -0.48
COL8A1-206ENST00000474648 DDNO94850 711 aaPredicted RBP12.08□□□□□ -0.48
COL8A1-206ENST00000474648 SCNN1DP51172 638 aa12.08□□□□□ -0.48
COL8A1-206ENST00000474648 ZNF280AP59817 542 aaPredicted RBP12.08□□□□□ -0.48
COL8A1-206ENST00000474648 HDLBPQ00341 1268 aaKnown RBP12.08□□□□□ -0.48
COL8A1-206ENST00000474648 LRRFIP1Q32MZ4 808 aaKnown RBP12.08□□□□□ -0.48
COL8A1-206ENST00000474648 C8orf34Q49A92 452 aa12.08□□□□□ -0.48
COL8A1-206ENST00000474648 DZIP1Q86YF9 867 aaKnown RBP12.08□□□□□ -0.48
COL8A1-206ENST00000474648 APPBP2Q92624 585 aa12.08□□□□□ -0.48
COL8A1-206ENST00000474648 PUS7LQ9H0K6 701 aaKnown RBP12.08□□□□□ -0.48
COL8A1-206ENST00000474648 GAKO14976 1311 aa12.08□□□□□ -0.48
COL8A1-206ENST00000474648 ZC3H4Q9UPT8 1303 aaKnown RBP12.08□□□□□ -0.48
COL8A1-206ENST00000474648 GPR75-ASB3A0A0A6YYF3 556 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 M0R2C6 588 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 SBF1O95248 1867 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 LDHCP07864 332 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 USP17L8P0C7I0 530 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 CRKP46108 304 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 PPP4CP60510 307 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 GSTO1P78417 241 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 MCMDC2Q4G0Z9 681 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 APOBEC3HQ6NTF7 200 aaKnown RBP12.07□□□□□ -0.48
COL8A1-206ENST00000474648 HHIPL2Q6UWX4 724 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 CWC27Q6UX04 472 aaKnown RBP12.07□□□□□ -0.48
COL8A1-206ENST00000474648 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms