RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 SAGE1Q9NXZ1 904 aa13.29□□□□□ -0.28
RNF220-210ENST00000474394 NOP58Q9Y2X3 529 aaKnown RBP13.29□□□□□ -0.28
RNF220-210ENST00000474394 ASTN2O75129 1339 aaPredicted RBP13.29□□□□□ -0.28
RNF220-210ENST00000474394 PITPNM2Q9BZ72 1349 aa13.29□□□□□ -0.28
RNF220-210ENST00000474394 HMMRO75330 724 aa13.28□□□□□ -0.28
RNF220-210ENST00000474394 ADORA1P30542 326 aa13.28□□□□□ -0.28
RNF220-210ENST00000474394 PHKA1P46020 1223 aa13.28□□□□□ -0.28
RNF220-210ENST00000474394 RPAP2Q8IXW5 612 aaPredicted RBP13.28□□□□□ -0.28
RNF220-210ENST00000474394 MTMR14Q8NCE2 650 aa13.28□□□□□ -0.28
RNF220-210ENST00000474394 WDR66Q8TBY9 1149 aa13.28□□□□□ -0.28
RNF220-210ENST00000474394 XAGE2Q96GT9 111 aa13.28□□□□□ -0.28
RNF220-210ENST00000474394 NEUROD6Q96NK8 337 aa13.28□□□□□ -0.28
RNF220-210ENST00000474394 DENND2AQ9ULE3 1009 aa13.28□□□□□ -0.28
RNF220-210ENST00000474394 TTF2Q9UNY4 1162 aaKnown RBP13.28□□□□□ -0.28
RNF220-210ENST00000474394 MKI67P46013 3256 aaKnown RBP13.28□□□□□ -0.28
RNF220-210ENST00000474394 POLR2AP24928 1970 aaKnown RBP13.28□□□□□ -0.28
RNF220-210ENST00000474394 AKAP11Q9UKA4 1901 aa13.27□□□□□ -0.28
RNF220-210ENST00000474394 ADM5C9JUS6 153 aa13.27□□□□□ -0.29
RNF220-210ENST00000474394 SEMA3EO15041 775 aa13.27□□□□□ -0.29
RNF220-210ENST00000474394 RBM5P52756 815 aaKnown RBP eCLIP13.27□□□□□ -0.29
RNF220-210ENST00000474394 CFAP100Q494V2 611 aa13.27□□□□□ -0.29
RNF220-210ENST00000474394 GORABQ5T7V8 394 aa13.27□□□□□ -0.29
RNF220-210ENST00000474394 CCDC102BQ68D86 513 aa13.27□□□□□ -0.29
RNF220-210ENST00000474394 ZBED3Q96IU2 234 aaPredicted RBP13.27□□□□□ -0.29
RNF220-210ENST00000474394 ZNF408Q9H9D4 720 aa13.27□□□□□ -0.29
RNF220-210ENST00000474394 GPR108Q9NPR9 543 aa13.27□□□□□ -0.29
RNF220-210ENST00000474394 SUGT1Q9Y2Z0 365 aa13.27□□□□□ -0.29
RNF220-210ENST00000474394 ZBTB22O15209 634 aa13.26□□□□□ -0.29
RNF220-210ENST00000474394 MYO1BO43795 1136 aa13.26□□□□□ -0.29
RNF220-210ENST00000474394 MAST3O60307 1309 aa13.26□□□□□ -0.29
RNF220-210ENST00000474394 RRP1P56182 461 aaKnown RBP13.26□□□□□ -0.29
RNF220-210ENST00000474394 HSP90AB4PQ58FF6 505 aa13.26□□□□□ -0.29
RNF220-210ENST00000474394 CTU1Q7Z7A3 348 aaKnown RBP13.26□□□□□ -0.29
RNF220-210ENST00000474394 APOBEC3FQ8IUX4 373 aaKnown RBP13.26□□□□□ -0.29
RNF220-210ENST00000474394 ARAP2Q8WZ64 1704 aa13.26□□□□□ -0.29
RNF220-210ENST00000474394 SERPINA10Q9UK55 444 aa13.26□□□□□ -0.29
RNF220-210ENST00000474394 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.26□□□□□ -0.29
RNF220-210ENST00000474394 MYH13Q9UKX3 1938 aa13.25□□□□□ -0.29
RNF220-210ENST00000474394 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
RNF220-210ENST00000474394 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
RNF220-210ENST00000474394 HDLBPQ00341 1268 aaKnown RBP13.25□□□□□ -0.29
RNF220-210ENST00000474394 TNNI3KQ59H18 835 aa13.25□□□□□ -0.29
RNF220-210ENST00000474394 ERC1Q8IUD2 1116 aa13.25□□□□□ -0.29
RNF220-210ENST00000474394 FPGT-TNNI3KV9GXZ4 949 aa13.25□□□□□ -0.29
RNF220-210ENST00000474394 TRPA1O75762 1119 aa13.24□□□□□ -0.29
RNF220-210ENST00000474394 CRKP46108 304 aa13.24□□□□□ -0.29
RNF220-210ENST00000474394 HUNKP57058 714 aa13.24□□□□□ -0.29
RNF220-210ENST00000474394 GRIK5Q16478 980 aa13.24□□□□□ -0.29
RNF220-210ENST00000474394 DLK2Q6UY11 383 aa13.24□□□□□ -0.29
RNF220-210ENST00000474394 ZGPATQ8N5A5 531 aaKnown RBP13.24□□□□□ -0.29
RNF220-210ENST00000474394 TEKT1Q969V4 418 aa13.24□□□□□ -0.29
RNF220-210ENST00000474394 CDCA5Q96FF9 252 aa13.24□□□□□ -0.29
RNF220-210ENST00000474394 PRMT6Q96LA8 375 aaPredicted RBP13.24□□□□□ -0.29
RNF220-210ENST00000474394 MRIQ9BWK5 157 aa13.24□□□□□ -0.29
RNF220-210ENST00000474394 RNF186Q9NXI6 227 aa13.24□□□□□ -0.29
RNF220-210ENST00000474394 HPS5Q9UPZ3 1129 aa13.24□□□□□ -0.29
RNF220-210ENST00000474394 EXOC6BQ9Y2D4 811 aa13.24□□□□□ -0.29
RNF220-210ENST00000474394 PCDHAC2Q9Y5I4 1007 aa13.24□□□□□ -0.29
RNF220-210ENST00000474394 COL1A1P02452 1464 aaPredicted RBP13.23□□□□□ -0.29
RNF220-210ENST00000474394 PDS5AQ29RF7 1337 aaKnown RBP13.23□□□□□ -0.29
RNF220-210ENST00000474394 SALL1Q9NSC2 1324 aa13.23□□□□□ -0.29
RNF220-210ENST00000474394 UQCRFS1P1P0C7P4 283 aa13.23□□□□□ -0.29
RNF220-210ENST00000474394 RASGRF1Q13972 1273 aa13.23□□□□□ -0.29
RNF220-210ENST00000474394 CCDC158Q5M9N0 1113 aa13.23□□□□□ -0.29
RNF220-210ENST00000474394 SIRT2Q8IXJ6 389 aa13.23□□□□□ -0.29
RNF220-210ENST00000474394 C2orf69Q8N8R5 385 aa13.23□□□□□ -0.29
RNF220-210ENST00000474394 GBA2Q9HCG7 927 aaPredicted RBP13.23□□□□□ -0.29
RNF220-210ENST00000474394 CLRN2A0PK11 232 aa13.22□□□□□ -0.29
RNF220-210ENST00000474394 FAM155AB1AL88 458 aaPredicted RBP13.22□□□□□ -0.29
RNF220-210ENST00000474394 LDHBP07195 334 aaKnown RBP13.22□□□□□ -0.29
RNF220-210ENST00000474394 ARID4AP29374 1257 aaPredicted RBP13.22□□□□□ -0.29
RNF220-210ENST00000474394 PKN2Q16513 984 aaKnown RBP13.22□□□□□ -0.29
RNF220-210ENST00000474394 TTC39AQ5SRH9 613 aa13.22□□□□□ -0.29
RNF220-210ENST00000474394 RGMBQ6NW40 437 aa13.22□□□□□ -0.29
RNF220-210ENST00000474394 HHIPL2Q6UWX4 724 aa13.22□□□□□ -0.29
RNF220-210ENST00000474394 VEZTQ9HBM0 779 aa13.22□□□□□ -0.29
RNF220-210ENST00000474394 SCAF8Q9UPN6 1271 aaKnown RBP13.22□□□□□ -0.29
RNF220-210ENST00000474394 ECM29Q5VYK3 1845 aa13.21□□□□□ -0.29
RNF220-210ENST00000474394 RAB11FIP3O75154 756 aa13.21□□□□□ -0.29
RNF220-210ENST00000474394 PRDX5P30044 214 aa13.21□□□□□ -0.29
RNF220-210ENST00000474394 NF2P35240 595 aa13.21□□□□□ -0.29
RNF220-210ENST00000474394 KIF23Q02241 960 aaPredicted RBP13.21□□□□□ -0.29
RNF220-210ENST00000474394 TNFAIP1Q13829 316 aa13.21□□□□□ -0.29
RNF220-210ENST00000474394 SPDYE2Q495Y8 402 aa13.21□□□□□ -0.29
RNF220-210ENST00000474394 SPTY2D1Q68D10 685 aaPredicted RBP13.21□□□□□ -0.29
RNF220-210ENST00000474394 RHPN1Q8TCX5 695 aa13.21□□□□□ -0.29
RNF220-210ENST00000474394 CCDC102AQ96A19 550 aa13.21□□□□□ -0.29
RNF220-210ENST00000474394 KIF1BPQ96EK5 621 aa13.21□□□□□ -0.29
RNF220-210ENST00000474394 ZDHHC15Q96MV8 337 aa13.21□□□□□ -0.29
RNF220-210ENST00000474394 DBNDD2Q9BQY9 259 aa13.21□□□□□ -0.29
RNF220-210ENST00000474394 TDRD3Q9H7E2 651 aaKnown RBP13.21□□□□□ -0.29
RNF220-210ENST00000474394 ZNF70Q9UC06 446 aaPredicted RBP13.21□□□□□ -0.29
RNF220-210ENST00000474394 PPP2R3BQ9Y5P8 575 aa13.21□□□□□ -0.29
RNF220-210ENST00000474394 FKBP1BP68106 108 aa13.2□□□□□ -0.3
RNF220-210ENST00000474394 PRAMEF18Q5VWM3 479 aa13.2□□□□□ -0.3
RNF220-210ENST00000474394 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
RNF220-210ENST00000474394 EAF2Q96CJ1 260 aaPredicted RBP13.2□□□□□ -0.3
RNF220-210ENST00000474394 CCDC8Q9H0W5 538 aaPredicted RBP13.2□□□□□ -0.3
RNF220-210ENST00000474394 DEFB129Q9H1M3 183 aa13.2□□□□□ -0.3
RNF220-210ENST00000474394 TMOD2Q9NZR1 351 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms