RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 CDK5RAP2Q96SN8 1893 aa16.49■□□□□ 0.23
LDLRAP1-204ENST00000474283 FSD1Q9BTV5 496 aa16.49■□□□□ 0.23
LDLRAP1-204ENST00000474283 PIH1D3Q9NQM4 214 aaKnown RBP16.49■□□□□ 0.23
LDLRAP1-204ENST00000474283 LRP2BPQ9P2M1 347 aa16.49■□□□□ 0.23
LDLRAP1-204ENST00000474283 GJA3Q9Y6H8 435 aa16.49■□□□□ 0.23
LDLRAP1-204ENST00000474283 ZNF541Q9H0D2 1346 aa16.48■□□□□ 0.23
LDLRAP1-204ENST00000474283 FZD9O00144 591 aa16.48■□□□□ 0.23
LDLRAP1-204ENST00000474283 ZBTB22O15209 634 aa16.48■□□□□ 0.23
LDLRAP1-204ENST00000474283 IDH1O75874 414 aaKnown RBP16.48■□□□□ 0.23
LDLRAP1-204ENST00000474283 CHMLP26374 656 aa16.48■□□□□ 0.23
LDLRAP1-204ENST00000474283 TNIP1Q15025 636 aa16.48■□□□□ 0.23
LDLRAP1-204ENST00000474283 DACT2Q5SW24 774 aa16.48■□□□□ 0.23
LDLRAP1-204ENST00000474283 RAI14Q9P0K7 980 aa16.48■□□□□ 0.23
LDLRAP1-204ENST00000474283 F8W031 263 aaPredicted RBP16.47■□□□□ 0.23
LDLRAP1-204ENST00000474283 LDHBP07195 334 aaKnown RBP16.47■□□□□ 0.23
LDLRAP1-204ENST00000474283 SPTY2D1Q68D10 685 aaPredicted RBP16.47■□□□□ 0.23
LDLRAP1-204ENST00000474283 ZSCAN25Q6NSZ9 544 aa16.47■□□□□ 0.23
LDLRAP1-204ENST00000474283 ESYT1Q9BSJ8 1104 aa16.47■□□□□ 0.23
LDLRAP1-204ENST00000474283 SALL1Q9NSC2 1324 aa16.46■□□□□ 0.23
LDLRAP1-204ENST00000474283 ZFYP08048 801 aaPredicted RBP16.46■□□□□ 0.23
LDLRAP1-204ENST00000474283 VIL1P09327 827 aaKnown RBP16.46■□□□□ 0.23
LDLRAP1-204ENST00000474283 PRDX5P30044 214 aa16.46■□□□□ 0.23
LDLRAP1-204ENST00000474283 RSBN1LQ6PCB5 846 aaPredicted RBP16.46■□□□□ 0.23
LDLRAP1-204ENST00000474283 DZIP1Q86YF9 867 aaKnown RBP16.46■□□□□ 0.23
LDLRAP1-204ENST00000474283 CERS5Q8N5B7 392 aa16.46■□□□□ 0.23
LDLRAP1-204ENST00000474283 KBTBD3Q8NAB2 608 aa16.46■□□□□ 0.23
LDLRAP1-204ENST00000474283 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.46■□□□□ 0.23
LDLRAP1-204ENST00000474283 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
LDLRAP1-204ENST00000474283 FKBP1AP62942 108 aaKnown RBP16.45■□□□□ 0.22
LDLRAP1-204ENST00000474283 MAP3K12Q12852 859 aa16.45■□□□□ 0.22
LDLRAP1-204ENST00000474283 GRIK5Q16478 980 aa16.45■□□□□ 0.22
LDLRAP1-204ENST00000474283 KIAA0825Q8IV33 1275 aa16.45■□□□□ 0.22
LDLRAP1-204ENST00000474283 POLR2AP24928 1970 aaKnown RBP16.45■□□□□ 0.22
LDLRAP1-204ENST00000474283 SCN4AP35499 1836 aa16.45■□□□□ 0.22
LDLRAP1-204ENST00000474283 MYO3BQ8WXR4 1341 aa16.45■□□□□ 0.22
LDLRAP1-204ENST00000474283 ANAPC15P60006 121 aa16.44■□□□□ 0.22
LDLRAP1-204ENST00000474283 ANO2Q9NQ90 1003 aa16.44■□□□□ 0.22
LDLRAP1-204ENST00000474283 TTF2Q9UNY4 1162 aaKnown RBP16.44■□□□□ 0.22
LDLRAP1-204ENST00000474283 FOCADQ5VW36 1801 aa16.43■□□□□ 0.22
LDLRAP1-204ENST00000474283 SEC24BO95487 1268 aa16.43■□□□□ 0.22
LDLRAP1-204ENST00000474283 MECOMQ03112 1051 aa16.43■□□□□ 0.22
LDLRAP1-204ENST00000474283 RABEP1Q15276 862 aa16.43■□□□□ 0.22
LDLRAP1-204ENST00000474283 SLC9C2Q5TAH2 1124 aa16.43■□□□□ 0.22
LDLRAP1-204ENST00000474283 RNF20Q5VTR2 975 aa16.43■□□□□ 0.22
LDLRAP1-204ENST00000474283 GPC2Q8N158 579 aa16.43■□□□□ 0.22
LDLRAP1-204ENST00000474283 MAGEB6Q8N7X4 407 aa16.43■□□□□ 0.22
LDLRAP1-204ENST00000474283 SUGT1Q9Y2Z0 365 aa16.43■□□□□ 0.22
LDLRAP1-204ENST00000474283 BAZ2AQ9UIF9 1905 aaKnown RBP16.43■□□□□ 0.22
LDLRAP1-204ENST00000474283 MAST3O60307 1309 aa16.43■□□□□ 0.22
LDLRAP1-204ENST00000474283 ZC3H4Q9UPT8 1303 aaKnown RBP16.43■□□□□ 0.22
LDLRAP1-204ENST00000474283 IGSF3O75054 1194 aa16.42■□□□□ 0.22
LDLRAP1-204ENST00000474283 DDNO94850 711 aaPredicted RBP16.42■□□□□ 0.22
LDLRAP1-204ENST00000474283 PDE6AP16499 860 aa16.42■□□□□ 0.22
LDLRAP1-204ENST00000474283 GMPSP49915 693 aaPredicted RBP16.42■□□□□ 0.22
LDLRAP1-204ENST00000474283 SCNN1DP51172 638 aa16.42■□□□□ 0.22
LDLRAP1-204ENST00000474283 NAA16Q6N069 864 aaPredicted RBP16.42■□□□□ 0.22
LDLRAP1-204ENST00000474283 DPY19L2Q6NUT2 758 aa16.42■□□□□ 0.22
LDLRAP1-204ENST00000474283 TMED8Q6PL24 325 aaPredicted RBP16.42■□□□□ 0.22
LDLRAP1-204ENST00000474283 HSCBQ8IWL3 235 aa16.42■□□□□ 0.22
LDLRAP1-204ENST00000474283 AGBL3Q8NEM8 1001 aa16.42■□□□□ 0.22
LDLRAP1-204ENST00000474283 MYH1P12882 1939 aa16.41■□□□□ 0.22
LDLRAP1-204ENST00000474283 SGSM2O43147 1006 aa16.41■□□□□ 0.22
LDLRAP1-204ENST00000474283 ST18O60284 1047 aa16.41■□□□□ 0.22
LDLRAP1-204ENST00000474283 CHGBP05060 677 aa16.41■□□□□ 0.22
LDLRAP1-204ENST00000474283 CYP7A1P22680 504 aa16.41■□□□□ 0.22
LDLRAP1-204ENST00000474283 RPS12P25398 132 aaKnown RBP16.41■□□□□ 0.22
LDLRAP1-204ENST00000474283 GSTO1P78417 241 aa16.41■□□□□ 0.22
LDLRAP1-204ENST00000474283 DIXDC1Q155Q3 683 aa16.41■□□□□ 0.22
LDLRAP1-204ENST00000474283 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
LDLRAP1-204ENST00000474283 NSUN4Q96CB9 384 aaKnown RBP16.41■□□□□ 0.22
LDLRAP1-204ENST00000474283 HDAC9Q9UKV0 1011 aa16.41■□□□□ 0.22
LDLRAP1-204ENST00000474283 ZNF532Q9HCE3 1301 aa16.41■□□□□ 0.22
LDLRAP1-204ENST00000474283 NAV1Q8NEY1 1877 aa16.4■□□□□ 0.22
LDLRAP1-204ENST00000474283 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
LDLRAP1-204ENST00000474283 RNF113AO15541 343 aaKnown RBP16.4■□□□□ 0.22
LDLRAP1-204ENST00000474283 USP17L8P0C7I0 530 aa16.4■□□□□ 0.22
LDLRAP1-204ENST00000474283 ADD2P35612 726 aa16.4■□□□□ 0.22
LDLRAP1-204ENST00000474283 RBM5P52756 815 aaKnown RBP eCLIP16.4■□□□□ 0.22
LDLRAP1-204ENST00000474283 CWC27Q6UX04 472 aaKnown RBP16.4■□□□□ 0.22
LDLRAP1-204ENST00000474283 SLF2Q8IX21 1173 aa16.4■□□□□ 0.22
LDLRAP1-204ENST00000474283 OGFOD1Q8N543 542 aa16.4■□□□□ 0.22
LDLRAP1-204ENST00000474283 GMLQ99445 158 aa16.4■□□□□ 0.22
LDLRAP1-204ENST00000474283 USP26Q9BXU7 913 aa16.4■□□□□ 0.22
LDLRAP1-204ENST00000474283 LDHCP07864 332 aa16.39■□□□□ 0.21
LDLRAP1-204ENST00000474283 ZKSCAN1P17029 563 aaPredicted RBP16.39■□□□□ 0.21
LDLRAP1-204ENST00000474283 MCM2P49736 904 aa16.39■□□□□ 0.21
LDLRAP1-204ENST00000474283 ZNF384Q8TF68 577 aa16.39■□□□□ 0.21
LDLRAP1-204ENST00000474283 TEKT1Q969V4 418 aa16.39■□□□□ 0.21
LDLRAP1-204ENST00000474283 HELLSQ9NRZ9 838 aa16.39■□□□□ 0.21
LDLRAP1-204ENST00000474283 SHTN1A0MZ66 631 aa16.38■□□□□ 0.21
LDLRAP1-204ENST00000474283 GLTPD2A6NH11 291 aa16.38■□□□□ 0.21
LDLRAP1-204ENST00000474283 LMOD1P29536 600 aaPredicted RBP16.38■□□□□ 0.21
LDLRAP1-204ENST00000474283 CRKP46108 304 aa16.38■□□□□ 0.21
LDLRAP1-204ENST00000474283 NMIQ13287 307 aaPredicted RBP16.38■□□□□ 0.21
LDLRAP1-204ENST00000474283 MICALL2Q8IY33 904 aa16.38■□□□□ 0.21
LDLRAP1-204ENST00000474283 DPF2Q92785 391 aa16.38■□□□□ 0.21
LDLRAP1-204ENST00000474283 NOL10Q9BSC4 688 aaKnown RBP16.38■□□□□ 0.21
LDLRAP1-204ENST00000474283 CNOT7Q9UIV1 285 aaKnown RBP16.38■□□□□ 0.21
LDLRAP1-204ENST00000474283 MROH7-TTC4A0A0A0MT08 1334 aa16.38■□□□□ 0.21
LDLRAP1-204ENST00000474283 TCRBV5S4A2TA0A5A2 114 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms