RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 AOX1Q06278 1338 aa13.87□□□□□ -0.19
CKS1B-206ENST00000474215 LBX1P52954 281 aa13.86□□□□□ -0.19
CKS1B-206ENST00000474215 SPDYE2Q495Y8 402 aa13.86□□□□□ -0.19
CKS1B-206ENST00000474215 TEKT1Q969V4 418 aa13.86□□□□□ -0.19
CKS1B-206ENST00000474215 TDRD3Q9H7E2 651 aaKnown RBP13.86□□□□□ -0.19
CKS1B-206ENST00000474215 ZNF70Q9UC06 446 aaPredicted RBP13.86□□□□□ -0.19
CKS1B-206ENST00000474215 SEMA3EO15041 775 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 CA12O43570 354 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 SLC10A3P09131 477 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 HSPA8P11142 646 aaKnown RBP13.85□□□□□ -0.19
CKS1B-206ENST00000474215 MS4A1P11836 297 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 ADORA1P30542 326 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 PHKA1P46020 1223 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 ATP8B2P98198 1209 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 KIF23Q02241 960 aaPredicted RBP13.85□□□□□ -0.19
CKS1B-206ENST00000474215 G3BP1Q13283 466 aaKnown RBP eCLIP13.85□□□□□ -0.19
CKS1B-206ENST00000474215 RASA3Q14644 834 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 SUPT20HL1Q3ZLR7 823 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 ARMC9Q7Z3E5 817 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 DENND2AQ9ULE3 1009 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 THSD7BQ9C0I4 1608 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 COL1A1P02452 1464 aaPredicted RBP13.85□□□□□ -0.19
CKS1B-206ENST00000474215 MAST3O60307 1309 aa13.85□□□□□ -0.19
CKS1B-206ENST00000474215 A0A1B0GUL7 405 aa13.84□□□□□ -0.19
CKS1B-206ENST00000474215 ZBTB22O15209 634 aa13.84□□□□□ -0.19
CKS1B-206ENST00000474215 TNFAIP1Q13829 316 aa13.84□□□□□ -0.19
CKS1B-206ENST00000474215 PRKG1Q13976 671 aa13.84□□□□□ -0.19
CKS1B-206ENST00000474215 POLA2Q14181 598 aa13.84□□□□□ -0.19
CKS1B-206ENST00000474215 LDLRAD1Q5T700 205 aa13.84□□□□□ -0.19
CKS1B-206ENST00000474215 CCDC102BQ68D86 513 aa13.84□□□□□ -0.19
CKS1B-206ENST00000474215 HHIPL2Q6UWX4 724 aa13.84□□□□□ -0.19
CKS1B-206ENST00000474215 TNS4Q8IZW8 715 aa13.84□□□□□ -0.19
CKS1B-206ENST00000474215 PANK1Q8TE04 598 aa13.84□□□□□ -0.19
CKS1B-206ENST00000474215 SSH3Q8TE77 659 aa13.84□□□□□ -0.19
CKS1B-206ENST00000474215 ZDHHC15Q96MV8 337 aa13.84□□□□□ -0.19
CKS1B-206ENST00000474215 PAPPA2Q9BXP8 1791 aa13.83□□□□□ -0.19
CKS1B-206ENST00000474215 PPP1R12BO60237 982 aaPredicted RBP13.83□□□□□ -0.2
CKS1B-206ENST00000474215 MVPQ14764 893 aaKnown RBP13.83□□□□□ -0.2
CKS1B-206ENST00000474215 NBPF12Q5TAG4 269 aaPredicted RBP13.83□□□□□ -0.2
CKS1B-206ENST00000474215 RASAL3Q86YV0 1011 aa13.83□□□□□ -0.2
CKS1B-206ENST00000474215 REM2Q8IYK8 340 aaPredicted RBP13.83□□□□□ -0.2
CKS1B-206ENST00000474215 XAGE2Q96GT9 111 aa13.83□□□□□ -0.2
CKS1B-206ENST00000474215 NEUROD6Q96NK8 337 aa13.83□□□□□ -0.2
CKS1B-206ENST00000474215 C1orf115Q9H7X2 142 aa13.83□□□□□ -0.2
CKS1B-206ENST00000474215 RCAN3Q9UKA8 241 aa13.83□□□□□ -0.2
CKS1B-206ENST00000474215 ANGEL1Q9UNK9 670 aaKnown RBP13.83□□□□□ -0.2
CKS1B-206ENST00000474215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.83□□□□□ -0.2
CKS1B-206ENST00000474215 TCP10L2B9ZVM9 353 aa13.82□□□□□ -0.2
CKS1B-206ENST00000474215 LDHBP07195 334 aaKnown RBP13.82□□□□□ -0.2
CKS1B-206ENST00000474215 TNNI2P48788 182 aa13.82□□□□□ -0.2
CKS1B-206ENST00000474215 APOBEC3HQ6NTF7 200 aaKnown RBP13.82□□□□□ -0.2
CKS1B-206ENST00000474215 CSRNP1Q96S65 589 aa13.82□□□□□ -0.2
CKS1B-206ENST00000474215 SALL1Q9NSC2 1324 aa13.82□□□□□ -0.2
CKS1B-206ENST00000474215 SURF6O75683 361 aaKnown RBP13.81□□□□□ -0.2
CKS1B-206ENST00000474215 PRDX5P30044 214 aa13.81□□□□□ -0.2
CKS1B-206ENST00000474215 RASGRF1Q13972 1273 aa13.81□□□□□ -0.2
CKS1B-206ENST00000474215 MAP3K11Q16584 847 aa13.81□□□□□ -0.2
CKS1B-206ENST00000474215 GORABQ5T7V8 394 aa13.81□□□□□ -0.2
CKS1B-206ENST00000474215 TSKSQ9UJT2 592 aa13.81□□□□□ -0.2
CKS1B-206ENST00000474215 FZD1Q9UP38 647 aa13.81□□□□□ -0.2
CKS1B-206ENST00000474215 UNCXA6NJT0 531 aa13.8□□□□□ -0.2
CKS1B-206ENST00000474215 USP2O75604 605 aaPredicted RBP13.8□□□□□ -0.2
CKS1B-206ENST00000474215 CACNB3P54284 484 aa13.8□□□□□ -0.2
CKS1B-206ENST00000474215 OS9Q13438 667 aaPredicted RBP13.8□□□□□ -0.2
CKS1B-206ENST00000474215 FKBP1CQ5VVH2 108 aa13.8□□□□□ -0.2
CKS1B-206ENST00000474215 ZGPATQ8N5A5 531 aaKnown RBP13.8□□□□□ -0.2
CKS1B-206ENST00000474215 SLC10A4Q96EP9 437 aa13.8□□□□□ -0.2
CKS1B-206ENST00000474215 TEPSINQ96N21 525 aa13.8□□□□□ -0.2
CKS1B-206ENST00000474215 GPR108Q9NPR9 543 aa13.8□□□□□ -0.2
CKS1B-206ENST00000474215 TMOD2Q9NZR1 351 aa13.8□□□□□ -0.2
CKS1B-206ENST00000474215 NOP58Q9Y2X3 529 aaKnown RBP13.8□□□□□ -0.2
CKS1B-206ENST00000474215 ARAP2Q8WZ64 1704 aa13.8□□□□□ -0.2
CKS1B-206ENST00000474215 PDS5AQ29RF7 1337 aaKnown RBP13.8□□□□□ -0.2
CKS1B-206ENST00000474215 SSC5DA1L4H1 1573 aa13.79□□□□□ -0.2
CKS1B-206ENST00000474215 IREB2P48200 963 aaKnown RBP13.79□□□□□ -0.2
CKS1B-206ENST00000474215 DIXDC1Q155Q3 683 aa13.79□□□□□ -0.2
CKS1B-206ENST00000474215 SPTY2D1Q68D10 685 aaPredicted RBP13.79□□□□□ -0.2
CKS1B-206ENST00000474215 CEP85Q6P2H3 762 aa13.79□□□□□ -0.2
CKS1B-206ENST00000474215 TMEM39BQ9GZU3 492 aa13.79□□□□□ -0.2
CKS1B-206ENST00000474215 RNF186Q9NXI6 227 aa13.79□□□□□ -0.2
CKS1B-206ENST00000474215 SAGE1Q9NXZ1 904 aa13.79□□□□□ -0.2
CKS1B-206ENST00000474215 DAGLAQ9Y4D2 1042 aa13.79□□□□□ -0.2
CKS1B-206ENST00000474215 ECM29Q5VYK3 1845 aa13.78□□□□□ -0.2
CKS1B-206ENST00000474215 TRPA1O75762 1119 aa13.78□□□□□ -0.2
CKS1B-206ENST00000474215 SPRYD7Q5W111 196 aa13.78□□□□□ -0.2
CKS1B-206ENST00000474215 FAM83AQ86UY5 434 aa13.78□□□□□ -0.2
CKS1B-206ENST00000474215 SPATA5Q8NB90 893 aa13.78□□□□□ -0.2
CKS1B-206ENST00000474215 CLMNQ96JQ2 1002 aa13.78□□□□□ -0.2
CKS1B-206ENST00000474215 HMG20BQ9P0W2 317 aa13.78□□□□□ -0.2
CKS1B-206ENST00000474215 ABCF2Q9UG63 623 aa13.78□□□□□ -0.2
CKS1B-206ENST00000474215 UQCRFS1P1P0C7P4 283 aa13.77□□□□□ -0.21
CKS1B-206ENST00000474215 ARID4AP29374 1257 aaPredicted RBP13.77□□□□□ -0.21
CKS1B-206ENST00000474215 TM4SF4P48230 202 aa13.77□□□□□ -0.21
CKS1B-206ENST00000474215 MKRN3Q13064 507 aaKnown RBP13.77□□□□□ -0.21
CKS1B-206ENST00000474215 TNNI3KQ59H18 835 aa13.77□□□□□ -0.21
CKS1B-206ENST00000474215 CDC42EP5Q6NZY7 148 aa13.77□□□□□ -0.21
CKS1B-206ENST00000474215 CDAN1Q8IWY9 1227 aa13.77□□□□□ -0.21
CKS1B-206ENST00000474215 ANKRD13AQ8IZ07 590 aa13.77□□□□□ -0.21
CKS1B-206ENST00000474215 USP40Q9NVE5 1235 aa13.77□□□□□ -0.21
CKS1B-206ENST00000474215 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms