RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 G3BP1Q13283 466 aaKnown RBP eCLIP23.05■■□□□ 1.28
CCDC171-206ENST00000474193 TEKT1Q969V4 418 aa23.05■■□□□ 1.28
CCDC171-206ENST00000474193 CRKP46108 304 aa23.04■■□□□ 1.28
CCDC171-206ENST00000474193 ITPRIPQ8IWB1 547 aa23.04■■□□□ 1.28
CCDC171-206ENST00000474193 MRIQ9BWK5 157 aa23.04■■□□□ 1.28
CCDC171-206ENST00000474193 TNNQ9UQP3 1299 aa23.04■■□□□ 1.28
CCDC171-206ENST00000474193 SLC10A3P09131 477 aa23.03■■□□□ 1.28
CCDC171-206ENST00000474193 HSPA8P11142 646 aaKnown RBP23.03■■□□□ 1.28
CCDC171-206ENST00000474193 KIF23Q02241 960 aaPredicted RBP23.03■■□□□ 1.28
CCDC171-206ENST00000474193 PRKG1Q13976 671 aa23.03■■□□□ 1.28
CCDC171-206ENST00000474193 TMOD2Q9NZR1 351 aa23.03■■□□□ 1.28
CCDC171-206ENST00000474193 DENND2AQ9ULE3 1009 aa23.03■■□□□ 1.28
CCDC171-206ENST00000474193 PAPPA2Q9BXP8 1791 aa23.03■■□□□ 1.28
CCDC171-206ENST00000474193 SEMA3EO15041 775 aa23.02■■□□□ 1.28
CCDC171-206ENST00000474193 TDRD3Q9H7E2 651 aaKnown RBP23.02■■□□□ 1.28
CCDC171-206ENST00000474193 ZNF70Q9UC06 446 aaPredicted RBP23.02■■□□□ 1.28
CCDC171-206ENST00000474193 PCDHAC2Q9Y5I4 1007 aa23.02■■□□□ 1.28
CCDC171-206ENST00000474193 FAM155AB1AL88 458 aaPredicted RBP23.01■■□□□ 1.27
CCDC171-206ENST00000474193 RRP1P56182 461 aaKnown RBP23.01■■□□□ 1.27
CCDC171-206ENST00000474193 SPDYE2Q495Y8 402 aa23.01■■□□□ 1.27
CCDC171-206ENST00000474193 GORABQ5T7V8 394 aa23.01■■□□□ 1.27
CCDC171-206ENST00000474193 ANGEL1Q9UNK9 670 aaKnown RBP23.01■■□□□ 1.27
CCDC171-206ENST00000474193 THSD7BQ9C0I4 1608 aa23■■□□□ 1.27
CCDC171-206ENST00000474193 PDE3AQ14432 1141 aa23■■□□□ 1.27
CCDC171-206ENST00000474193 RASA3Q14644 834 aa23■■□□□ 1.27
CCDC171-206ENST00000474193 MOB2Q70IA6 237 aa23■■□□□ 1.27
CCDC171-206ENST00000474193 ZGPATQ8N5A5 531 aaKnown RBP23■■□□□ 1.27
CCDC171-206ENST00000474193 PANK1Q8TE04 598 aa23■■□□□ 1.27
CCDC171-206ENST00000474193 NEUROD6Q96NK8 337 aa23■■□□□ 1.27
CCDC171-206ENST00000474193 ECM29Q5VYK3 1845 aa22.99■■□□□ 1.27
CCDC171-206ENST00000474193 TIMM10P62072 90 aa22.99■■□□□ 1.27
CCDC171-206ENST00000474193 TFCP2Q12800 502 aa22.99■■□□□ 1.27
CCDC171-206ENST00000474193 OS9Q13438 667 aaPredicted RBP22.99■■□□□ 1.27
CCDC171-206ENST00000474193 MVPQ14764 893 aaKnown RBP22.99■■□□□ 1.27
CCDC171-206ENST00000474193 RASAL3Q86YV0 1011 aa22.99■■□□□ 1.27
CCDC171-206ENST00000474193 SLC10A4Q96EP9 437 aa22.99■■□□□ 1.27
CCDC171-206ENST00000474193 LDHBP07195 334 aaKnown RBP22.98■■□□□ 1.27
CCDC171-206ENST00000474193 IREB2P48200 963 aaKnown RBP22.98■■□□□ 1.27
CCDC171-206ENST00000474193 HHIPL2Q6UWX4 724 aa22.98■■□□□ 1.27
CCDC171-206ENST00000474193 CHMP4BQ9H444 224 aaKnown RBP22.98■■□□□ 1.27
CCDC171-206ENST00000474193 A0A1B0GUL7 405 aa22.97■■□□□ 1.27
CCDC171-206ENST00000474193 UNCXA6NJT0 531 aa22.97■■□□□ 1.27
CCDC171-206ENST00000474193 TCP10L2B9ZVM9 353 aa22.97■■□□□ 1.27
CCDC171-206ENST00000474193 ATP8B2P98198 1209 aa22.97■■□□□ 1.27
CCDC171-206ENST00000474193 CCDC102BQ68D86 513 aa22.97■■□□□ 1.27
CCDC171-206ENST00000474193 ZDHHC15Q96MV8 337 aa22.97■■□□□ 1.27
CCDC171-206ENST00000474193 ZIC5Q96T25 663 aa22.97■■□□□ 1.27
CCDC171-206ENST00000474193 SUPT16HQ9Y5B9 1047 aaKnown RBP22.97■■□□□ 1.27
CCDC171-206ENST00000474193 PNMA6EA0A0J9YXQ4 647 aa22.96■■□□□ 1.27
CCDC171-206ENST00000474193 RLBP1P12271 317 aa22.96■■□□□ 1.27
CCDC171-206ENST00000474193 PHKA1P46020 1223 aa22.96■■□□□ 1.27
CCDC171-206ENST00000474193 GRIK5Q16478 980 aa22.96■■□□□ 1.27
CCDC171-206ENST00000474193 NBPF12Q5TAG4 269 aaPredicted RBP22.96■■□□□ 1.27
CCDC171-206ENST00000474193 SPTY2D1Q68D10 685 aaPredicted RBP22.96■■□□□ 1.27
CCDC171-206ENST00000474193 HOOK2Q96ED9 719 aa22.96■■□□□ 1.27
CCDC171-206ENST00000474193 XAGE2Q96GT9 111 aa22.96■■□□□ 1.27
CCDC171-206ENST00000474193 CSRNP1Q96S65 589 aa22.96■■□□□ 1.27
CCDC171-206ENST00000474193 SAGE1Q9NXZ1 904 aa22.96■■□□□ 1.27
CCDC171-206ENST00000474193 TSKSQ9UJT2 592 aa22.96■■□□□ 1.27
CCDC171-206ENST00000474193 ZBTB7BO15156 539 aaPredicted RBP22.95■■□□□ 1.26
CCDC171-206ENST00000474193 SLF2Q8IX21 1173 aa22.95■■□□□ 1.26
CCDC171-206ENST00000474193 ARAP2Q8WZ64 1704 aa22.95■■□□□ 1.26
CCDC171-206ENST00000474193 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.95■■□□□ 1.26
CCDC171-206ENST00000474193 MYH13Q9UKX3 1938 aa22.95■■□□□ 1.26
CCDC171-206ENST00000474193 MAP3K11Q16584 847 aa22.94■■□□□ 1.26
CCDC171-206ENST00000474193 LDLRAD1Q5T700 205 aa22.94■■□□□ 1.26
CCDC171-206ENST00000474193 DDX19BQ9UMR2 479 aa22.94■■□□□ 1.26
CCDC171-206ENST00000474193 COG6Q9Y2V7 657 aa22.94■■□□□ 1.26
CCDC171-206ENST00000474193 SALL1Q9NSC2 1324 aa22.93■■□□□ 1.26
CCDC171-206ENST00000474193 ZBTB22O15209 634 aa22.93■■□□□ 1.26
CCDC171-206ENST00000474193 SURF6O75683 361 aaKnown RBP22.93■■□□□ 1.26
CCDC171-206ENST00000474193 TRPA1O75762 1119 aa22.93■■□□□ 1.26
CCDC171-206ENST00000474193 ADORA1P30542 326 aa22.93■■□□□ 1.26
CCDC171-206ENST00000474193 SREBF2Q12772 1141 aa22.93■■□□□ 1.26
CCDC171-206ENST00000474193 FKBP1CQ5VVH2 108 aa22.93■■□□□ 1.26
CCDC171-206ENST00000474193 ANKRD13AQ8IZ07 590 aa22.92■■□□□ 1.26
CCDC171-206ENST00000474193 SSH3Q8TE77 659 aa22.92■■□□□ 1.26
CCDC171-206ENST00000474193 RNF186Q9NXI6 227 aa22.92■■□□□ 1.26
CCDC171-206ENST00000474193 ABCF2Q9UG63 623 aa22.92■■□□□ 1.26
CCDC171-206ENST00000474193 AKAP11Q9UKA4 1901 aa22.92■■□□□ 1.26
CCDC171-206ENST00000474193 AOX1Q06278 1338 aa22.91■■□□□ 1.26
CCDC171-206ENST00000474193 INHBEP58166 350 aa22.91■■□□□ 1.26
CCDC171-206ENST00000474193 POLA2Q14181 598 aa22.91■■□□□ 1.26
CCDC171-206ENST00000474193 C20orf194Q5TEA3 1177 aa22.91■■□□□ 1.26
CCDC171-206ENST00000474193 APOBEC3HQ6NTF7 200 aaKnown RBP22.91■■□□□ 1.26
CCDC171-206ENST00000474193 FAM83AQ86UY5 434 aa22.91■■□□□ 1.26
CCDC171-206ENST00000474193 DZIP1Q86YF9 867 aaKnown RBP22.91■■□□□ 1.26
CCDC171-206ENST00000474193 C1orf115Q9H7X2 142 aa22.91■■□□□ 1.26
CCDC171-206ENST00000474193 PDS5AQ29RF7 1337 aaKnown RBP22.9■■□□□ 1.26
CCDC171-206ENST00000474193 USP2O75604 605 aaPredicted RBP22.9■■□□□ 1.26
CCDC171-206ENST00000474193 UQCRFS1P1P0C7P4 283 aa22.9■■□□□ 1.26
CCDC171-206ENST00000474193 PRDX5P30044 214 aa22.9■■□□□ 1.26
CCDC171-206ENST00000474193 MKRN3Q13064 507 aaKnown RBP22.9■■□□□ 1.26
CCDC171-206ENST00000474193 TMEM39BQ9GZU3 492 aa22.9■■□□□ 1.26
CCDC171-206ENST00000474193 GPR108Q9NPR9 543 aa22.9■■□□□ 1.26
CCDC171-206ENST00000474193 CAPN15O75808 1086 aa22.89■■□□□ 1.25
CCDC171-206ENST00000474193 CCDC158Q5M9N0 1113 aa22.89■■□□□ 1.25
CCDC171-206ENST00000474193 SPRYD7Q5W111 196 aa22.89■■□□□ 1.25
CCDC171-206ENST00000474193 ERICH6Q7L0X2 663 aa22.89■■□□□ 1.25
CCDC171-206ENST00000474193 FZD1Q9UP38 647 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms