RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 TEPSINQ96N21 525 aa16.86■□□□□ 0.29
COPS7B-219ENST00000474042 E9PSI1 815 aa16.85■□□□□ 0.29
COPS7B-219ENST00000474042 GRIK5Q16478 980 aa16.85■□□□□ 0.29
COPS7B-219ENST00000474042 METTL24Q5JXM2 366 aa16.85■□□□□ 0.29
COPS7B-219ENST00000474042 CDAN1Q8IWY9 1227 aa16.85■□□□□ 0.29
COPS7B-219ENST00000474042 SSH1Q8WYL5 1049 aa16.85■□□□□ 0.29
COPS7B-219ENST00000474042 TDRD3Q9H7E2 651 aaKnown RBP16.85■□□□□ 0.29
COPS7B-219ENST00000474042 KIF16BQ96L93 1317 aa16.85■□□□□ 0.29
COPS7B-219ENST00000474042 HTTP42858 3142 aa16.84■□□□□ 0.29
COPS7B-219ENST00000474042 TESPA1A2RU30 521 aaPredicted RBP16.84■□□□□ 0.29
COPS7B-219ENST00000474042 PDE8BO95263 885 aa16.84■□□□□ 0.29
COPS7B-219ENST00000474042 HDLBPQ00341 1268 aaKnown RBP16.84■□□□□ 0.29
COPS7B-219ENST00000474042 USP44Q9H0E7 712 aa16.84■□□□□ 0.29
COPS7B-219ENST00000474042 TBC1D22AQ8WUA7 517 aa16.83■□□□□ 0.28
COPS7B-219ENST00000474042 IQSEC3Q9UPP2 1182 aaPredicted RBP16.83■□□□□ 0.28
COPS7B-219ENST00000474042 FGFR2P21802 821 aa16.82■□□□□ 0.28
COPS7B-219ENST00000474042 SLFN5Q08AF3 891 aa16.82■□□□□ 0.28
COPS7B-219ENST00000474042 CHAF1AQ13111 956 aaPredicted RBP16.82■□□□□ 0.28
COPS7B-219ENST00000474042 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
COPS7B-219ENST00000474042 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.82■□□□□ 0.28
COPS7B-219ENST00000474042 VPS37DQ86XT2 251 aa16.82■□□□□ 0.28
COPS7B-219ENST00000474042 KLHDC4Q8TBB5 520 aa16.82■□□□□ 0.28
COPS7B-219ENST00000474042 OPTNQ96CV9 577 aa16.82■□□□□ 0.28
COPS7B-219ENST00000474042 TMEM39BQ9GZU3 492 aa16.82■□□□□ 0.28
COPS7B-219ENST00000474042 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.82■□□□□ 0.28
COPS7B-219ENST00000474042 RPAP1Q9BWH6 1393 aaPredicted RBP16.81■□□□□ 0.28
COPS7B-219ENST00000474042 TCP10L2B9ZVM9 353 aa16.81■□□□□ 0.28
COPS7B-219ENST00000474042 RFX5P48382 616 aaPredicted RBP16.81■□□□□ 0.28
COPS7B-219ENST00000474042 TNNI2P48788 182 aa16.81■□□□□ 0.28
COPS7B-219ENST00000474042 CRHR2Q13324 411 aa16.81■□□□□ 0.28
COPS7B-219ENST00000474042 OTOP1Q7RTM1 612 aa16.81■□□□□ 0.28
COPS7B-219ENST00000474042 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.81■□□□□ 0.28
COPS7B-219ENST00000474042 MS4A4AQ96JQ5 239 aa16.81■□□□□ 0.28
COPS7B-219ENST00000474042 PTPN18Q99952 460 aa16.81■□□□□ 0.28
COPS7B-219ENST00000474042 ELP3Q9H9T3 547 aa16.81■□□□□ 0.28
COPS7B-219ENST00000474042 MAST3O60307 1309 aa16.8■□□□□ 0.28
COPS7B-219ENST00000474042 BCAMP50895 628 aa16.8■□□□□ 0.28
COPS7B-219ENST00000474042 VGLL4Q14135 290 aa16.8■□□□□ 0.28
COPS7B-219ENST00000474042 PUM3Q15397 648 aaKnown RBP16.8■□□□□ 0.28
COPS7B-219ENST00000474042 ALDH1L2Q3SY69 923 aa16.8■□□□□ 0.28
COPS7B-219ENST00000474042 TEKT1Q969V4 418 aa16.8■□□□□ 0.28
COPS7B-219ENST00000474042 ZDHHC15Q96MV8 337 aa16.8■□□□□ 0.28
COPS7B-219ENST00000474042 SUGT1Q9Y2Z0 365 aa16.8■□□□□ 0.28
COPS7B-219ENST00000474042 TRIM17Q9Y577 477 aa16.8■□□□□ 0.28
COPS7B-219ENST00000474042 OTUD7BQ6GQQ9 843 aa16.79■□□□□ 0.28
COPS7B-219ENST00000474042 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
COPS7B-219ENST00000474042 ERO1AQ96HE7 468 aa16.79■□□□□ 0.28
COPS7B-219ENST00000474042 MRIQ9BWK5 157 aa16.79■□□□□ 0.28
COPS7B-219ENST00000474042 EYA2O00167 538 aa16.78■□□□□ 0.28
COPS7B-219ENST00000474042 FRAT2O75474 233 aaPredicted RBP16.78■□□□□ 0.28
COPS7B-219ENST00000474042 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
COPS7B-219ENST00000474042 CACNB3P54284 484 aa16.78■□□□□ 0.28
COPS7B-219ENST00000474042 PRPF38BQ5VTL8 546 aaKnown RBP16.78■□□□□ 0.28
COPS7B-219ENST00000474042 FKBP1CQ5VVH2 108 aa16.78■□□□□ 0.28
COPS7B-219ENST00000474042 FAM83AQ86UY5 434 aa16.78■□□□□ 0.28
COPS7B-219ENST00000474042 CD99L2Q8TCZ2 262 aa16.78■□□□□ 0.28
COPS7B-219ENST00000474042 BRI3BPQ8WY22 251 aa16.78■□□□□ 0.28
COPS7B-219ENST00000474042 MAP3K9P80192 1104 aa16.77■□□□□ 0.28
COPS7B-219ENST00000474042 CAP1Q01518 475 aa16.77■□□□□ 0.28
COPS7B-219ENST00000474042 APOBEC3HQ6NTF7 200 aaKnown RBP16.77■□□□□ 0.28
COPS7B-219ENST00000474042 TRMT2AQ8IZ69 625 aaKnown RBP16.77■□□□□ 0.28
COPS7B-219ENST00000474042 SMC4Q9NTJ3 1288 aa16.77■□□□□ 0.28
COPS7B-219ENST00000474042 SNCAIPQ9Y6H5 919 aa16.77■□□□□ 0.28
COPS7B-219ENST00000474042 ZSWIM8A7E2V4 1837 aa16.76■□□□□ 0.27
COPS7B-219ENST00000474042 SPDYE5A6NIY4 337 aa16.76■□□□□ 0.27
COPS7B-219ENST00000474042 SLC5A1P13866 664 aa16.76■□□□□ 0.27
COPS7B-219ENST00000474042 HHIPL2Q6UWX4 724 aa16.76■□□□□ 0.27
COPS7B-219ENST00000474042 ATG9AQ7Z3C6 839 aa16.76■□□□□ 0.27
COPS7B-219ENST00000474042 LPIN2Q92539 896 aa16.76■□□□□ 0.27
COPS7B-219ENST00000474042 CDCA7LQ96GN5 454 aa16.76■□□□□ 0.27
COPS7B-219ENST00000474042 TMOD2Q9NZR1 351 aa16.76■□□□□ 0.27
COPS7B-219ENST00000474042 CSADQ9Y600 493 aa16.76■□□□□ 0.27
COPS7B-219ENST00000474042 DOCK2Q92608 1830 aa16.75■□□□□ 0.27
COPS7B-219ENST00000474042 CCL15-CCL14A0A0B4J2E2 113 aa16.75■□□□□ 0.27
COPS7B-219ENST00000474042 GTF2A2P52657 109 aa16.75■□□□□ 0.27
COPS7B-219ENST00000474042 SP3Q02447 781 aa16.75■□□□□ 0.27
COPS7B-219ENST00000474042 CCL15Q16663 113 aa16.75■□□□□ 0.27
COPS7B-219ENST00000474042 OTUD5Q96G74 571 aa16.75■□□□□ 0.27
COPS7B-219ENST00000474042 FBXO3Q9UK99 471 aa16.75■□□□□ 0.27
COPS7B-219ENST00000474042 PTPN22Q9Y2R2 807 aa16.75■□□□□ 0.27
COPS7B-219ENST00000474042 CIAO1O76071 339 aa16.74■□□□□ 0.27
COPS7B-219ENST00000474042 INTS3Q68E01 1043 aaKnown RBP16.74■□□□□ 0.27
COPS7B-219ENST00000474042 WDR66Q8TBY9 1149 aa16.74■□□□□ 0.27
COPS7B-219ENST00000474042 ARMC5Q96C12 935 aa16.74■□□□□ 0.27
COPS7B-219ENST00000474042 WRNIP1Q96S55 665 aa16.74■□□□□ 0.27
COPS7B-219ENST00000474042 EFCC1Q9HA90 598 aa16.74■□□□□ 0.27
COPS7B-219ENST00000474042 CT47B1P0C2W7 299 aaPredicted RBP16.73■□□□□ 0.27
COPS7B-219ENST00000474042 UBTFL1P0CB47 393 aaPredicted RBP16.73■□□□□ 0.27
COPS7B-219ENST00000474042 TAF1CQ15572 869 aaPredicted RBP16.73■□□□□ 0.27
COPS7B-219ENST00000474042 ERO1BQ86YB8 467 aa16.73■□□□□ 0.27
COPS7B-219ENST00000474042 FAM43AQ8N2R8 423 aa16.73■□□□□ 0.27
COPS7B-219ENST00000474042 HOOK2Q96ED9 719 aa16.73■□□□□ 0.27
COPS7B-219ENST00000474042 MYH2Q9UKX2 1941 aa16.72■□□□□ 0.27
COPS7B-219ENST00000474042 KIAA0100Q14667 2235 aaKnown RBP16.72■□□□□ 0.27
COPS7B-219ENST00000474042 POTEFA5A3E0 1075 aa16.72■□□□□ 0.27
COPS7B-219ENST00000474042 ZBTB22O15209 634 aa16.72■□□□□ 0.27
COPS7B-219ENST00000474042 PPIL2Q13356 520 aa16.72■□□□□ 0.27
COPS7B-219ENST00000474042 ATP2B3Q16720 1220 aa16.72■□□□□ 0.27
COPS7B-219ENST00000474042 DCAF15Q66K64 600 aa16.72■□□□□ 0.27
COPS7B-219ENST00000474042 ZFYVE28Q9HCC9 887 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms