RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 RSRP1Q9BUV0 290 aa6.4□□□□□ -1.38
BRCA1-212ENST00000473961 RBSNQ9H1K0 784 aa6.4□□□□□ -1.38
BRCA1-212ENST00000473961 KANSL3Q9P2N6 904 aa6.4□□□□□ -1.38
BRCA1-212ENST00000473961 USP21Q9UK80 565 aa6.4□□□□□ -1.38
BRCA1-212ENST00000473961 KIAA1324LA8MWY0 1029 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-212ENST00000473961 MED26O95402 600 aa6.39□□□□□ -1.39
BRCA1-212ENST00000473961 HOXD8P13378 290 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-212ENST00000473961 NFKB1P19838 968 aa6.39□□□□□ -1.39
BRCA1-212ENST00000473961 TARSP26639 723 aaKnown RBP6.39□□□□□ -1.39
BRCA1-212ENST00000473961 GJA8P48165 433 aa6.39□□□□□ -1.39
BRCA1-212ENST00000473961 RAC1P63000 192 aa6.39□□□□□ -1.39
BRCA1-212ENST00000473961 RACK1P63244 317 aaKnown RBP6.39□□□□□ -1.39
BRCA1-212ENST00000473961 SPEM2Q0P670 501 aa6.39□□□□□ -1.39
BRCA1-212ENST00000473961 SFSWAPQ12872 951 aaKnown RBP6.39□□□□□ -1.39
BRCA1-212ENST00000473961 PRR23CQ6ZRP0 262 aa6.39□□□□□ -1.39
BRCA1-212ENST00000473961 SV2BQ7L1I2 683 aa6.39□□□□□ -1.39
BRCA1-212ENST00000473961 GPRASP2Q96D09 838 aa6.39□□□□□ -1.39
BRCA1-212ENST00000473961 SRA1Q9HD15 236 aaKnown RBP6.39□□□□□ -1.39
BRCA1-212ENST00000473961 TLR7Q9NYK1 1049 aaKnown RBP6.39□□□□□ -1.39
BRCA1-212ENST00000473961 SALL4Q9UJQ4 1053 aa6.39□□□□□ -1.39
BRCA1-212ENST00000473961 TMEM238LA0A1B0GVL6 79 aa6.38□□□□□ -1.39
BRCA1-212ENST00000473961 STK10O94804 968 aaKnown RBP6.38□□□□□ -1.39
BRCA1-212ENST00000473961 KIF4AO95239 1232 aa6.38□□□□□ -1.39
BRCA1-212ENST00000473961 TNNI2P48788 182 aa6.38□□□□□ -1.39
BRCA1-212ENST00000473961 KIAA0825Q8IV33 1275 aa6.38□□□□□ -1.39
BRCA1-212ENST00000473961 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.38□□□□□ -1.39
BRCA1-212ENST00000473961 SPON2Q9BUD6 331 aa6.38□□□□□ -1.39
BRCA1-212ENST00000473961 AKAP2Q9Y2D5 859 aa6.38□□□□□ -1.39
BRCA1-212ENST00000473961 FAM177BA6PVY3 158 aa6.37□□□□□ -1.39
BRCA1-212ENST00000473961 CYP2E1P05181 493 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-212ENST00000473961 FSTP19883 344 aa6.37□□□□□ -1.39
BRCA1-212ENST00000473961 LMNB1P20700 586 aa6.37□□□□□ -1.39
BRCA1-212ENST00000473961 NRLP54845 237 aa6.37□□□□□ -1.39
BRCA1-212ENST00000473961 PAK2Q13177 524 aa6.37□□□□□ -1.39
BRCA1-212ENST00000473961 DHX32Q7L7V1 743 aaKnown RBP6.37□□□□□ -1.39
BRCA1-212ENST00000473961 NOP9Q86U38 636 aaKnown RBP6.37□□□□□ -1.39
BRCA1-212ENST00000473961 FMR1NBQ8N0W7 255 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-212ENST00000473961 GLIS3Q8NEA6 775 aa6.37□□□□□ -1.39
BRCA1-212ENST00000473961 WFDC12Q8WWY7 111 aa6.37□□□□□ -1.39
BRCA1-212ENST00000473961 BHMTQ93088 406 aa6.37□□□□□ -1.39
BRCA1-212ENST00000473961 MEGF10Q96KG7 1140 aa6.37□□□□□ -1.39
BRCA1-212ENST00000473961 OSMRQ99650 979 aa6.37□□□□□ -1.39
BRCA1-212ENST00000473961 SLC30A3Q99726 388 aa6.37□□□□□ -1.39
BRCA1-212ENST00000473961 KBTBD4Q9NVX7 518 aa6.37□□□□□ -1.39
BRCA1-212ENST00000473961 LILRB5O75023 590 aa6.36□□□□□ -1.39
BRCA1-212ENST00000473961 NOS3P29474 1203 aa6.36□□□□□ -1.39
BRCA1-212ENST00000473961 GBP2P32456 591 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-212ENST00000473961 COL9A2Q14055 689 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-212ENST00000473961 PEAR1Q5VY43 1037 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-212ENST00000473961 KRTAP5-3Q6L8H2 238 aa6.36□□□□□ -1.39
BRCA1-212ENST00000473961 DPH6Q7L8W6 267 aa6.36□□□□□ -1.39
BRCA1-212ENST00000473961 CCNJLQ8IV13 435 aa6.36□□□□□ -1.39
BRCA1-212ENST00000473961 C3orf58Q8NDZ4 430 aa6.36□□□□□ -1.39
BRCA1-212ENST00000473961 SEC16BQ96JE7 1060 aa6.36□□□□□ -1.39
BRCA1-212ENST00000473961 TMEM74Q96NL1 305 aa6.36□□□□□ -1.39
BRCA1-212ENST00000473961 DNAJC2Q99543 621 aaKnown RBP6.36□□□□□ -1.39
BRCA1-212ENST00000473961 ABCB6Q9NP58 842 aa6.36□□□□□ -1.39
BRCA1-212ENST00000473961 LATS2Q9NRM7 1088 aa6.36□□□□□ -1.39
BRCA1-212ENST00000473961 STRIP2Q9ULQ0 834 aa6.36□□□□□ -1.39
BRCA1-212ENST00000473961 SAMM50Q9Y512 469 aa6.36□□□□□ -1.39
BRCA1-212ENST00000473961 ADAMTS4O75173 837 aa6.35□□□□□ -1.39
BRCA1-212ENST00000473961 GHRHP01286 108 aa6.35□□□□□ -1.39
BRCA1-212ENST00000473961 SSBP05455 408 aaKnown RBP eCLIP6.35□□□□□ -1.39
BRCA1-212ENST00000473961 HSP90B1P14625 803 aaKnown RBP6.35□□□□□ -1.39
BRCA1-212ENST00000473961 ATF4P18848 351 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-212ENST00000473961 IREB2P48200 963 aaKnown RBP6.35□□□□□ -1.39
BRCA1-212ENST00000473961 RPS26P11Q5JNZ5 115 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-212ENST00000473961 ILDR2Q71H61 639 aa6.35□□□□□ -1.39
BRCA1-212ENST00000473961 SLC51AQ86UW1 340 aa6.35□□□□□ -1.39
BRCA1-212ENST00000473961 FAM177A1Q8N128 213 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-212ENST00000473961 RASGRP4Q8TDF6 673 aa6.35□□□□□ -1.39
BRCA1-212ENST00000473961 DHX38Q92620 1227 aaKnown RBP6.35□□□□□ -1.39
BRCA1-212ENST00000473961 ZKSCAN3Q9BRR0 538 aa6.35□□□□□ -1.39
BRCA1-212ENST00000473961 ZFATQ9P243 1243 aa6.35□□□□□ -1.39
BRCA1-212ENST00000473961 SUPT16HQ9Y5B9 1047 aaKnown RBP6.35□□□□□ -1.39
BRCA1-212ENST00000473961 ITPKAP23677 461 aa6.34□□□□□ -1.39
BRCA1-212ENST00000473961 EIF4A3P38919 411 aaKnown RBP6.34□□□□□ -1.39
BRCA1-212ENST00000473961 GPLD1P80108 840 aa6.34□□□□□ -1.39
BRCA1-212ENST00000473961 PPP2R3AQ06190 1150 aa6.34□□□□□ -1.39
BRCA1-212ENST00000473961 CKAP2LQ8IYA6 745 aa6.34□□□□□ -1.39
BRCA1-212ENST00000473961 TMEM102Q8N9M5 508 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-212ENST00000473961 TCF12Q99081 682 aa6.34□□□□□ -1.39
BRCA1-212ENST00000473961 BHLHE41Q9C0J9 482 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-212ENST00000473961 TMA7Q9Y2S6 64 aaKnown RBP6.34□□□□□ -1.39
BRCA1-212ENST00000473961 SMARCA5O60264 1052 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-212ENST00000473961 SMNDC1O75940 238 aaKnown RBP eCLIP6.33□□□□□ -1.4
BRCA1-212ENST00000473961 FGRP09769 529 aa6.33□□□□□ -1.4
BRCA1-212ENST00000473961 RPS26P62854 115 aaKnown RBP6.33□□□□□ -1.4
BRCA1-212ENST00000473961 RBL2Q08999 1139 aa6.33□□□□□ -1.4
BRCA1-212ENST00000473961 NBPF6Q5VWK0 638 aa6.33□□□□□ -1.4
BRCA1-212ENST00000473961 TPTE2Q6XPS3 522 aa6.33□□□□□ -1.4
BRCA1-212ENST00000473961 CEP120Q8N960 986 aa6.33□□□□□ -1.4
BRCA1-212ENST00000473961 NBPF4Q96M43 638 aa6.33□□□□□ -1.4
BRCA1-212ENST00000473961 NSUN5Q96P11 429 aaKnown RBP6.33□□□□□ -1.4
BRCA1-212ENST00000473961 PUS7Q96PZ0 661 aaKnown RBP6.33□□□□□ -1.4
BRCA1-212ENST00000473961 DZANK1Q9NVP4 752 aa6.33□□□□□ -1.4
BRCA1-212ENST00000473961 A0A096LPE4 126 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 LOC102724428A0A0B4J2F2 783 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 A0A1W2PPZ6 126 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 MINDY4BA8MYZ0 360 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms