RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 HMGB1P09429 215 aaKnown RBP21.35■■□□□ 1.01
VARS2-206ENST00000473916 DEKP35659 375 aaKnown RBP21.35■■□□□ 1.01
VARS2-206ENST00000473916 APOBRQ0VD83 1088 aa21.35■■□□□ 1.01
VARS2-206ENST00000473916 EZH2Q15910 746 aaKnown RBP21.35■■□□□ 1.01
VARS2-206ENST00000473916 MCTP1Q6DN14 999 aa21.35■■□□□ 1.01
VARS2-206ENST00000473916 RBM17Q96I25 401 aaKnown RBP21.35■■□□□ 1.01
VARS2-206ENST00000473916 XDHP47989 1333 aa21.34■■□□□ 1.01
VARS2-206ENST00000473916 TRAK2O60296 914 aa21.34■■□□□ 1.01
VARS2-206ENST00000473916 FGD1P98174 961 aa21.34■■□□□ 1.01
VARS2-206ENST00000473916 EN1Q05925 392 aaPredicted RBP21.34■■□□□ 1.01
VARS2-206ENST00000473916 INCENPQ9NQS7 918 aa21.34■■□□□ 1.01
VARS2-206ENST00000473916 GSG1L2A8MUP6 293 aa21.34■■□□□ 1.01
VARS2-206ENST00000473916 MMP10P09238 476 aa21.34■■□□□ 1.01
VARS2-206ENST00000473916 SYT1P21579 422 aa21.34■■□□□ 1.01
VARS2-206ENST00000473916 FOXD4L6Q3SYB3 417 aaPredicted RBP21.34■■□□□ 1.01
VARS2-206ENST00000473916 FOXD4L3Q6VB84 417 aaPredicted RBP21.34■■□□□ 1.01
VARS2-206ENST00000473916 NLGN1Q8N2Q7 840 aa21.34■■□□□ 1.01
VARS2-206ENST00000473916 BAZ2AQ9UIF9 1905 aaKnown RBP21.34■■□□□ 1.01
VARS2-206ENST00000473916 KLRG2A4D1S0 409 aaPredicted RBP21.33■■□□□ 1.01
VARS2-206ENST00000473916 MB21D2Q8IYB1 491 aaPredicted RBP21.33■■□□□ 1.01
VARS2-206ENST00000473916 IFNL3Q8IZI9 196 aa21.33■■□□□ 1.01
VARS2-206ENST00000473916 NSFL1CQ9UNZ2 370 aaKnown RBP21.33■■□□□ 1.01
VARS2-206ENST00000473916 TACC3Q9Y6A5 838 aa21.33■■□□□ 1.01
VARS2-206ENST00000473916 GOLGB1Q14789 3259 aaKnown RBP21.33■■□□□ 1.01
VARS2-206ENST00000473916 CCDC88AQ3V6T2 1871 aa21.33■■□□□ 1.01
VARS2-206ENST00000473916 PATL2C9JE40 543 aaKnown RBP21.33■■□□□ 1
VARS2-206ENST00000473916 PRDX5P30044 214 aa21.33■■□□□ 1
VARS2-206ENST00000473916 HOXA10P31260 410 aaPredicted RBP21.33■■□□□ 1
VARS2-206ENST00000473916 ANTXR2P58335 489 aa21.33■■□□□ 1
VARS2-206ENST00000473916 SLC4A4Q9Y6R1 1079 aa21.33■■□□□ 1
VARS2-206ENST00000473916 LRRC37AA6NMS7 1700 aa21.32■■□□□ 1
VARS2-206ENST00000473916 LTBP1Q14766 1721 aa21.32■■□□□ 1
VARS2-206ENST00000473916 SEMA3EO15041 775 aa21.32■■□□□ 1
VARS2-206ENST00000473916 DYNLL1P63167 89 aaKnown RBP21.32■■□□□ 1
VARS2-206ENST00000473916 GTF3C6Q969F1 213 aa21.32■■□□□ 1
VARS2-206ENST00000473916 AGXT2Q9BYV1 514 aa21.32■■□□□ 1
VARS2-206ENST00000473916 LEMD3Q9Y2U8 911 aa21.32■■□□□ 1
VARS2-206ENST00000473916 UFL1O94874 794 aa21.31■■□□□ 1
VARS2-206ENST00000473916 CTDSPL2Q05D32 466 aa21.31■■□□□ 1
VARS2-206ENST00000473916 GZF1Q9H116 711 aaPredicted RBP21.31■■□□□ 1
VARS2-206ENST00000473916 MAST2Q6P0Q8 1798 aa21.31■■□□□ 1
VARS2-206ENST00000473916 NEDD4P46934 1319 aa21.31■■□□□ 1
VARS2-206ENST00000473916 STX6O43752 255 aa21.31■■□□□ 1
VARS2-206ENST00000473916 JAK2O60674 1132 aa21.31■■□□□ 1
VARS2-206ENST00000473916 SCRN1Q12765 414 aa21.31■■□□□ 1
VARS2-206ENST00000473916 GSE1Q14687 1217 aa21.31■■□□□ 1
VARS2-206ENST00000473916 OLFM4Q6UX06 510 aa21.31■■□□□ 1
VARS2-206ENST00000473916 SDR42E1Q8WUS8 393 aa21.31■■□□□ 1
VARS2-206ENST00000473916 NAPBQ9H115 298 aa21.31■■□□□ 1
VARS2-206ENST00000473916 PRC1O43663 620 aa21.3■■□□□ 1
VARS2-206ENST00000473916 MECOMQ03112 1051 aa21.3■■□□□ 1
VARS2-206ENST00000473916 ALX1Q15699 326 aa21.3■■□□□ 1
VARS2-206ENST00000473916 NAA16Q6N069 864 aaPredicted RBP21.3■■□□□ 1
VARS2-206ENST00000473916 NCOA7Q8NI08 942 aa21.3■■□□□ 1
VARS2-206ENST00000473916 NSUN4Q96CB9 384 aaKnown RBP21.3■■□□□ 1
VARS2-206ENST00000473916 CAMKK2Q96RR4 588 aa21.3■■□□□ 1
VARS2-206ENST00000473916 RIOK1Q9BRS2 568 aaKnown RBP21.3■■□□□ 1
VARS2-206ENST00000473916 WDR33Q9C0J8 1336 aaKnown RBP21.3■■□□□ 1
VARS2-206ENST00000473916 MAGEB6P1A0A0J9YX57 407 aa21.29■■□□□ 1
VARS2-206ENST00000473916 SMIM22K7EJ46 135 aa21.29■■□□□ 1
VARS2-206ENST00000473916 HMGB2P26583 209 aaKnown RBP21.29■■□□□ 1
VARS2-206ENST00000473916 BRIP1Q9BX63 1249 aa21.29■■□□□ 1
VARS2-206ENST00000473916 TIAM2Q8IVF5 1701 aa21.29■■□□□ 1
VARS2-206ENST00000473916 PDS5AQ29RF7 1337 aaKnown RBP21.29■■□□□ 1
VARS2-206ENST00000473916 CYB5R4Q7L1T6 521 aa21.29■■□□□ 1
VARS2-206ENST00000473916 FLAD1Q8NFF5 587 aa21.29■■□□□ 1
VARS2-206ENST00000473916 CRAMP1Q96RY5 1269 aa21.29■■□□□ 1
VARS2-206ENST00000473916 NCOA5Q9HCD5 579 aaKnown RBP21.29■■□□□ 1
VARS2-206ENST00000473916 POLLQ9UGP5 575 aa21.29■■□□□ 1
VARS2-206ENST00000473916 NAP1L2Q9ULW6 460 aaPredicted RBP21.29■■□□□ 1
VARS2-206ENST00000473916 BBOX1O75936 387 aa21.28■■□□□ 1
VARS2-206ENST00000473916 CCT2P78371 535 aaKnown RBP21.28■■□□□ 1
VARS2-206ENST00000473916 GRIK5Q16478 980 aa21.28■■□□□ 1
VARS2-206ENST00000473916 RALYLQ86SE5 291 aaKnown RBP21.28■■□□□ 1
VARS2-206ENST00000473916 STK11IPQ8N1F8 1099 aa21.28■■□□□ 1
VARS2-206ENST00000473916 ZMYM6O95789 1325 aa21.28■■□□□ 1
VARS2-206ENST00000473916 B4E1Z4 1266 aa21.28■■□□□ 1
VARS2-206ENST00000473916 PPFIA3O75145 1194 aa21.28■■□□□ 1
VARS2-206ENST00000473916 ZSCAN22P10073 491 aaPredicted RBP21.28■■□□□ 1
VARS2-206ENST00000473916 SRGNP10124 158 aa21.28■■□□□ 1
VARS2-206ENST00000473916 MCM5P33992 734 aa21.28■■□□□ 1
VARS2-206ENST00000473916 TDO2P48775 406 aa21.28■■□□□ 1
VARS2-206ENST00000473916 FBXO41Q8TF61 875 aa21.28■■□□□ 1
VARS2-206ENST00000473916 LMBRD1Q9NUN5 540 aa21.28■■□□□ 1
VARS2-206ENST00000473916 GGA1Q9UJY5 639 aa21.28■■□□□ 1
VARS2-206ENST00000473916 MTMR6Q9Y217 621 aa21.28■■□□□ 1
VARS2-206ENST00000473916 PARP3Q9Y6F1 533 aa21.28■■□□□ 1
VARS2-206ENST00000473916 PPEF1O14829 653 aaPredicted RBP21.27■■□□□ 1
VARS2-206ENST00000473916 PFKFB2O60825 505 aa21.27■■□□□ 1
VARS2-206ENST00000473916 TDRD7Q8NHU6 1098 aaKnown RBP21.27■■□□□ 1
VARS2-206ENST00000473916 GNAT2P19087 354 aa21.26■□□□□ 0.99
VARS2-206ENST00000473916 RAB11FIP4Q86YS3 637 aa21.26■□□□□ 0.99
VARS2-206ENST00000473916 BRPF3Q9ULD4 1205 aa21.26■□□□□ 0.99
VARS2-206ENST00000473916 GOLGA6L22H0YM25 854 aa21.26■□□□□ 0.99
VARS2-206ENST00000473916 CTDNEP1O95476 244 aa21.26■□□□□ 0.99
VARS2-206ENST00000473916 PDIA3P30101 505 aaKnown RBP21.26■□□□□ 0.99
VARS2-206ENST00000473916 SLC15A2Q16348 729 aa21.26■□□□□ 0.99
VARS2-206ENST00000473916 TBC1D16Q8TBP0 767 aa21.26■□□□□ 0.99
VARS2-206ENST00000473916 DDX11Q96FC9 970 aa21.26■□□□□ 0.99
VARS2-206ENST00000473916 PDGFDQ9GZP0 370 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms