RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 KCTD17Q8N5Z5 321 aa11.09□□□□□ -0.63
A1CF-209ENST00000473480 PLD4Q96BZ4 506 aa11.09□□□□□ -0.63
A1CF-209ENST00000473480 SPACA7Q96KW9 195 aa11.09□□□□□ -0.63
A1CF-209ENST00000473480 C8orf37Q96NL8 207 aa11.09□□□□□ -0.63
A1CF-209ENST00000473480 CCDC87Q9NVE4 849 aa11.09□□□□□ -0.63
A1CF-209ENST00000473480 GNEQ9Y223 722 aaKnown RBP11.09□□□□□ -0.63
A1CF-209ENST00000473480 CDC42BPBQ9Y5S2 1711 aa11.09□□□□□ -0.63
A1CF-209ENST00000473480 KIF14Q15058 1648 aa11.09□□□□□ -0.63
A1CF-209ENST00000473480 A6NHS1 94 aa11.08□□□□□ -0.64
A1CF-209ENST00000473480 SPATA31C1P0DKV0 1188 aa11.08□□□□□ -0.64
A1CF-209ENST00000473480 TRAPPC3LQ5T215 181 aa11.08□□□□□ -0.64
A1CF-209ENST00000473480 SAMD9LQ8IVG5 1584 aa11.07□□□□□ -0.64
A1CF-209ENST00000473480 KRBA1A5PL33 1030 aa11.07□□□□□ -0.64
A1CF-209ENST00000473480 RANGAP1P46060 587 aaPredicted RBP11.07□□□□□ -0.64
A1CF-209ENST00000473480 TRIM28Q13263 835 aaKnown RBP11.07□□□□□ -0.64
A1CF-209ENST00000473480 ECM1Q16610 540 aa11.07□□□□□ -0.64
A1CF-209ENST00000473480 GJD3Q8N144 294 aa11.07□□□□□ -0.64
A1CF-209ENST00000473480 BRPF3Q9ULD4 1205 aa11.07□□□□□ -0.64
A1CF-209ENST00000473480 MAP3K1Q13233 1512 aa11.07□□□□□ -0.64
A1CF-209ENST00000473480 KIF4AO95239 1232 aa11.06□□□□□ -0.64
A1CF-209ENST00000473480 CYP2E1P05181 493 aaPredicted RBP11.06□□□□□ -0.64
A1CF-209ENST00000473480 KCNA6P17658 529 aa11.06□□□□□ -0.64
A1CF-209ENST00000473480 ARHGAP4P98171 946 aa11.06□□□□□ -0.64
A1CF-209ENST00000473480 GRIK5Q16478 980 aa11.06□□□□□ -0.64
A1CF-209ENST00000473480 PLA2G4EQ3MJ16 856 aa11.06□□□□□ -0.64
A1CF-209ENST00000473480 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
A1CF-209ENST00000473480 PMEPA1Q969W9 287 aa11.06□□□□□ -0.64
A1CF-209ENST00000473480 CNTN3Q9P232 1028 aa11.06□□□□□ -0.64
A1CF-209ENST00000473480 SCAF11Q99590 1463 aaKnown RBP11.06□□□□□ -0.64
A1CF-209ENST00000473480 CES1P23141 567 aa11.05□□□□□ -0.64
A1CF-209ENST00000473480 C1QTNF8P60827 252 aa11.05□□□□□ -0.64
A1CF-209ENST00000473480 MSL1Q68DK7 614 aa11.05□□□□□ -0.64
A1CF-209ENST00000473480 NCAPG2Q86XI2 1143 aa11.05□□□□□ -0.64
A1CF-209ENST00000473480 TRAIPQ9BWF2 469 aa11.05□□□□□ -0.64
A1CF-209ENST00000473480 CLIP1P30622 1438 aa11.04□□□□□ -0.64
A1CF-209ENST00000473480 NDUFB5O43674 189 aa11.04□□□□□ -0.64
A1CF-209ENST00000473480 WFDC8Q8IUA0 241 aa11.04□□□□□ -0.64
A1CF-209ENST00000473480 C1orf127Q8N9H9 656 aa11.04□□□□□ -0.64
A1CF-209ENST00000473480 BLMP54132 1417 aaPredicted RBP11.03□□□□□ -0.64
A1CF-209ENST00000473480 SOWAHDA6NJG2 315 aa11.03□□□□□ -0.64
A1CF-209ENST00000473480 TNFRSF21O75509 655 aa11.03□□□□□ -0.64
A1CF-209ENST00000473480 IGHA1P01876 353 aa11.03□□□□□ -0.64
A1CF-209ENST00000473480 LTKP29376 864 aa11.03□□□□□ -0.64
A1CF-209ENST00000473480 RAC1P63000 192 aa11.03□□□□□ -0.64
A1CF-209ENST00000473480 GPAT2Q6NUI2 795 aa11.03□□□□□ -0.64
A1CF-209ENST00000473480 DEFB132Q7Z7B7 95 aa11.03□□□□□ -0.64
A1CF-209ENST00000473480 DMRTC2Q8IXT2 367 aaPredicted RBP11.03□□□□□ -0.64
A1CF-209ENST00000473480 SNX29Q8TEQ0 813 aa11.03□□□□□ -0.64
A1CF-209ENST00000473480 KANSL3Q9P2N6 904 aa11.03□□□□□ -0.64
A1CF-209ENST00000473480 EID1Q9Y6B2 187 aa11.03□□□□□ -0.64
A1CF-209ENST00000473480 ABCC3O15438 1527 aa11.03□□□□□ -0.64
A1CF-209ENST00000473480 WASHC2CQ9Y4E1 1318 aa11.03□□□□□ -0.64
A1CF-209ENST00000473480 A0A0A0MRY4 1105 aa11.02□□□□□ -0.65
A1CF-209ENST00000473480 FAM229AH3BQW9 127 aa11.02□□□□□ -0.65
A1CF-209ENST00000473480 KCNA1Q09470 495 aa11.02□□□□□ -0.65
A1CF-209ENST00000473480 PRDM15P57071 1507 aaPredicted RBP11.02□□□□□ -0.65
A1CF-209ENST00000473480 TIAM1Q13009 1591 aa11.02□□□□□ -0.65
A1CF-209ENST00000473480 AHDC1Q5TGY3 1603 aaPredicted RBP11.02□□□□□ -0.65
A1CF-209ENST00000473480 TROQ12816 1431 aaPredicted RBP11.01□□□□□ -0.65
A1CF-209ENST00000473480 PHACTR2O75167 634 aa11.01□□□□□ -0.65
A1CF-209ENST00000473480 SMNDC1O75940 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
A1CF-209ENST00000473480 GDF6Q6KF10 455 aaPredicted RBP11.01□□□□□ -0.65
A1CF-209ENST00000473480 CACTIN-AS1Q8N1I8 211 aa11.01□□□□□ -0.65
A1CF-209ENST00000473480 DTWD1Q8N5C7 304 aa11.01□□□□□ -0.65
A1CF-209ENST00000473480 CEP120Q8N960 986 aa11.01□□□□□ -0.65
A1CF-209ENST00000473480 CITED4Q96RK1 184 aa11.01□□□□□ -0.65
A1CF-209ENST00000473480 CHRDQ9H2X0 955 aa11.01□□□□□ -0.65
A1CF-209ENST00000473480 SALL4Q9UJQ4 1053 aa11.01□□□□□ -0.65
A1CF-209ENST00000473480 TRPC5Q9UL62 973 aaPredicted RBP11.01□□□□□ -0.65
A1CF-209ENST00000473480 PREX2Q70Z35 1606 aa11.01□□□□□ -0.65
A1CF-209ENST00000473480 EEA1Q15075 1411 aa11.01□□□□□ -0.65
A1CF-209ENST00000473480 ATP11AP98196 1134 aa11□□□□□ -0.65
A1CF-209ENST00000473480 PDE3BQ13370 1112 aa11□□□□□ -0.65
A1CF-209ENST00000473480 APBA3O96018 575 aa10.99□□□□□ -0.65
A1CF-209ENST00000473480 ITGB2P05107 769 aa10.99□□□□□ -0.65
A1CF-209ENST00000473480 ELNP15502 786 aa10.99□□□□□ -0.65
A1CF-209ENST00000473480 HNRNPMP52272 730 aaKnown RBP eCLIP10.99□□□□□ -0.65
A1CF-209ENST00000473480 NACC1Q96RE7 527 aa10.99□□□□□ -0.65
A1CF-209ENST00000473480 PBX4Q9BYU1 374 aa10.99□□□□□ -0.65
A1CF-209ENST00000473480 RASSF4Q9H2L5 321 aa10.99□□□□□ -0.65
A1CF-209ENST00000473480 FOXD3Q9UJU5 478 aaPredicted RBP10.99□□□□□ -0.65
A1CF-209ENST00000473480 TRIM33Q9UPN9 1127 aa10.99□□□□□ -0.65
A1CF-209ENST00000473480 MSTNO14793 375 aa10.98□□□□□ -0.65
A1CF-209ENST00000473480 CEP135Q66GS9 1140 aa10.98□□□□□ -0.65
A1CF-209ENST00000473480 CD163Q86VB7 1156 aa10.98□□□□□ -0.65
A1CF-209ENST00000473480 FMR1NBQ8N0W7 255 aaPredicted RBP10.98□□□□□ -0.65
A1CF-209ENST00000473480 IL22RA1Q8N6P7 574 aa10.98□□□□□ -0.65
A1CF-209ENST00000473480 BIN2Q9UBW5 565 aaPredicted RBP10.98□□□□□ -0.65
A1CF-209ENST00000473480 USP21Q9UK80 565 aa10.98□□□□□ -0.65
A1CF-209ENST00000473480 ADGBQ8N7X0 1667 aa10.98□□□□□ -0.65
A1CF-209ENST00000473480 C1QTNF9BB2RNN3 333 aa10.97□□□□□ -0.65
A1CF-209ENST00000473480 PATL2C9JE40 543 aaKnown RBP10.97□□□□□ -0.65
A1CF-209ENST00000473480 EREGO14944 169 aa10.97□□□□□ -0.65
A1CF-209ENST00000473480 BAG6P46379 1132 aa10.97□□□□□ -0.65
A1CF-209ENST00000473480 NKTRP30414 1462 aaKnown RBP10.97□□□□□ -0.65
A1CF-209ENST00000473480 BCL9LQ86UU0 1499 aa10.97□□□□□ -0.65
A1CF-209ENST00000473480 DIP2AQ14689 1571 aa10.97□□□□□ -0.65
A1CF-209ENST00000473480 CEP350Q5VT06 3117 aa10.97□□□□□ -0.65
A1CF-209ENST00000473480 INO80Q9ULG1 1556 aaPredicted RBP10.96□□□□□ -0.65
A1CF-209ENST00000473480 KIF3BO15066 747 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms